[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 10,792 items for (author: lin & x)

EMDB-69221:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11
Method: single particle / : Li XZ, Jiang Y

EMDB-69482:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11 local refinement (Masked on CDK2-CRBN)
Method: single particle / : Li XZ, Jiang Y

EMDB-69484:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11 local refinement (Masked on CDK2-CRBN-DDB1)
Method: single particle / : Li XZ, Jiang Y

EMDB-69485:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11 consensus refinement
Method: single particle / : Li XZ, Jiang Y

PDB-23sr:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11
Method: single particle / : Li XZ, Jiang Y

EMDB-55048:
CryoEM structure of NADH:quinone oxidoreductases YjlCD from Bacillus subtilis
Method: single particle / : Osman R, Cherrier MV, Nicolet Y, Juyoux P, Schoehn G, Seduk F, Garcia PS, Bizien-Jaglin L, Botte CY, Kosta A, Lebrun R, Mate MJ, Pierrel F, Yamaryo-Botte Y, Walburger A, Magalon A

EMDB-55049:
CryoEM structure of NADH:quinone oxidoreductases YjlCD fiber's HMP extremity from Bacillus subtilis
Method: single particle / : Osman R, Cherrier MV, Nicolet Y, Juyoux P, Schoehn G, Seduk F, Garcia PS, Bizien-Jaglin L, Botte CY, Kosta A, Lebrun R, Mate MJ, Pierrel F, Yamaryo-Botte Y, Walburger A, Magalon A

EMDB-55050:
CryoEM structure of NADH:quinone oxidoreductases YjlCD fiber's N-terminal extremity from Bacillus subtilis
Method: single particle / : Osman R, Cherrier MV, Nicolet Y, Juyoux P, Schoehn G, Seduk F, Garcia PS, Bizien-Jaglin L, Botte CY, Kosta A, Lebrun R, Mate MJ, Pierrel F, Yamaryo-Botte Y, Walburger A, Magalon A

PDB-9snk:
CryoEM structure of NADH:quinone oxidoreductases YjlCD from Bacillus subtilis
Method: single particle / : Osman R, Cherrier MV, Nicolet Y, Juyoux P, Schoehn G, Seduk F, Garcia PS, Bizien-Jaglin L, Botte CY, Kosta A, Lebrun R, Mate MJ, Pierrel F, Yamaryo-Botte Y, Walburger A, Magalon A

EMDB-76790:
Rabbit Aldolase, Laser Phase Plate TEM, Laser-ON dataset 1 (A1)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76791:
Rabbit Aldolase, Laser Phase Plate TEM, Laser-OFF dataset 1 (A1)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76792:
Rabbit Aldolase, Laser Phase Plate TEM, Laser-ON dataset 2 (A2)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76793:
Rabbit Aldolase, Laser Phase Plate TEM, Laser-OFF dataset 2 (A2)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76794:
Rabbit Aldolase, Laser Phase Plate TEM, Laser-ON dataset 3 (A3)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76797:
Rabbit Aldolase, Laser Phase Plate TEM, Laser-OFF dataset 3 (A3)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76802:
Human Hemoglobin, Laser Phase Plate TEM, Laser-ON dataset 1 (H1)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76804:
Human Hemoglobin, Laser Phase Plate TEM, Laser-OFF dataset 1 (H1)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76805:
Human Hemoglobin, Laser Phase Plate TEM, Laser-ON dataset 2 (H2)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76806:
Human Hemoglobin, Laser Phase Plate TEM, Laser-OFF dataset 2 (H2)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76807:
Human Hemoglobin, Laser Phase Plate TEM, Laser-ON dataset 3 (H3)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76809:
Human Hemoglobin, Laser Phase Plate TEM, Laser-OFF dataset 3 (H3)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76810:
Human Hemoglobin, Laser Phase Plate TEM, Laser-ON, Refined initial 3D class (IC-ON)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76811:
Human Hemoglobin, Laser Phase Plate TEM, Laser-OFF, Refined initial 3D class (IC-OFF)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-65271:
The structure of DmOR67d-DmOrco in the apo state
Method: single particle / : Wang J, Guo J

EMDB-65275:
The structure of DbOR67d-DbOrco in the apo-like state
Method: single particle / : Wang J, Guo J

EMDB-65276:
The structure of DbOR67d-DbOrco in the cVA-bound state
Method: single particle / : Wang J, Guo J

EMDB-65277:
The structure of DbOR67d-DbOrco in the Z11-bound state
Method: single particle / : Wang J, Guo J

EMDB-65278:
The structure of DbOR67d-DbOrco in the VUAA1-bound state
Method: single particle / : Wang J, Guo J

PDB-9vqo:
The structure of DmOR67d-DmOrco in the apo state
Method: single particle / : Wang J, Guo J

PDB-9vqs:
The structure of DbOR67d-DbOrco in the apo-like state
Method: single particle / : Wang J, Guo J

PDB-9vqt:
The structure of DbOR67d-DbOrco in the cVA-bound state
Method: single particle / : Wang J, Guo J

PDB-9vqu:
The structure of DbOR67d-DbOrco in the Z11-bound state
Method: single particle / : Wang J, Guo J

PDB-9vqv:
The structure of DbOR67d-DbOrco in the VUAA1-bound state
Method: single particle / : Wang J, Guo J

EMDB-65617:
Structure of the complex of human PD-1 and a PD-1-directed antibody
Method: single particle / : Jiang WB, Xu JL

PDB-9w43:
Structure of the complex of human PD-1 and a PD-1-directed antibody
Method: single particle / : Jiang WB, Xu JL

EMDB-71737:
Human 19S proteasome bound to TXNL1 PITH domain without C-terminus
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71740:
Human 26S proteasome bound to TXNL1 with opened gate of core particle
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71741:
Human 26S proteasome bound to TXNL1 with closed gate of core particle
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71810:
Human 19S proteasome bound to TXNL1 PITH domain and PSMD5
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71813:
Human 19S proteasome bound to TXNL1 PITH domain but with low density for RPT1, RPT2, and RPN1
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-76283:
Human 19S proteasome bound to TXNL1 PITH domain state 2
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-76415:
Human 19S proteasome regulatory particle bound to TXNL1 PITH domain and p28
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-58529:
CryoEM structure of a catalytically inactive CXC Chemokine-degrading protease SpyCEP from Streptococcus pyogenes complexed with an anti-N-terminal monoclonal antibody
Method: single particle / : Lau RJ, Wu GHY, Barritt JD, Huemer CB, Matthews S

EMDB-58555:
CryoEM structure of a catalytically inactive CXC Chemokine-degrading protease SpyCEP from Streptococcus pyogenes complexed with an anti-PA-domain monoclonal antibody
Method: single particle / : Lau RJ, Barritt JD, Wu GHY, Huemer CB, Matthews S

EMDB-65963:
In situ subtomogram average of 80S ribosome (local refined with LSU mask)
Method: subtomogram averaging / : Yang Q, Huang XJ, Zhang XZ

EMDB-68807:
Cryo-EM structure of human apoferritin at 1.81 Angstrom resolution(using CR-BIS data collection on Falcon4).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

EMDB-68808:
Cryo-EM structure of human apoferritin at 1.79 Angstrom resolution(using BIS data collection on Falcon4).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

EMDB-68809:
Cryo-EM structure of human apoferritin at 1.64 Angstrom resolution(using CR-BIS data collection on Falcon4i).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

EMDB-68810:
Cryo-EM structure of human apoferritin at 1.65 Angstrom resolution(using BIS data collection on Falcon4i).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

EMDB-68811:
Cryo-EM structure of human apoferritin at 2.05 Angstrom resolution(using CR-BIS data collection on K3).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more