[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 60 items for (author: lien & yw)

EMDB-50531:
Cryo-electron tomogram of Aureispira sp. CCB-QB1
Method: electron tomography / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-50533:
Cryo-electron tomogram of cryoFIB-milled Aureispira sp. CCB-QB1 mixed with Vibrio campbellii
Method: electron tomography / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-50544:
Cryo-electron tomogram of cryoFIB-milled Aureispira sp. CCB-QB1 and Vibrio campbellii
Method: electron tomography / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-50548:
cryo-electron tomogram of Aureispira sp. CCB-QB1
Method: electron tomography / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-50551:
Cryo-electron tomogram of cryoFIB-milled Aureispira sp. CCB-QB1 and Vibrio campbellii
Method: electron tomography / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-50554:
Subtomogram averaging of the extracellular antenna in closed state of a type 6 secretion system in Aureispira sp. CCB-QB1
Method: subtomogram averaging / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-50555:
subtomogram averaging of antenna in open state of a type 6 secretion in Aureispira sp. CCB-QB1
Method: subtomogram averaging / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-50556:
subtomogram averaging of the baseplate of a type 6 secretion system in Aureispira sp. CCB-QB1
Method: subtomogram averaging / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-50557:
subtomogram averaging of the trans-envelope complex of a type 6 secretion system of Aureispira sp. CCB-QB1
Method: subtomogram averaging / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-50558:
Subtomogram average of the distal hook region of the extracellular grappling hooks in Aureispira sp. CCB-QB1
Method: subtomogram averaging / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-50537:
CryoEM structure of the neck (1403-2314) in the grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Method: single particle / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-50538:
CryoEM structure of the fragment-3 (2061-2397) in the grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Method: single particle / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-50539:
CryoEM structure of the fragment-1 (3402-3733) in the grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Method: single particle / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-50540:
CryoEM structure of the fragment-5 (2393-2807) in the grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Method: single particle / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-50541:
CryoEM structure of the fragment-6 (3571-4078) in the grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Method: single particle / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-50542:
CryoEM structure of the fragment-4 (4074-4421) in the grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Method: single particle / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-50543:
CryoEM structure of the base (4151-5009) in the grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Method: single particle / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-51127:
CryoEM structure of the fragment-2 (2892-3236) in the grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Method: single particle / : Lien YW, Amendola D, Lee KS, Bartlau N, Xu J, Furusawa G, Polz MF, Stocker R, Weiss GL, Pilhofer M

EMDB-18953:
Cryo-electron tomogram of Yersinia entomophaga chi2-sfGFP cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-18954:
Cryo-electron tomogram of Yersinia entomophaga chi2-sfGFP cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-18955:
Cryo-electron tomogram of Yersinia entomophaga chi2-sfGFP cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-18957:
Cryo-electron tomogram of Yersinia entomophaga MH96 cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-18958:
Cryo-electron tomogram of Yersinia entomophaga MH96 cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-18960:
Cryo-electron tomogram of Yersinia entomophaga delta LC cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-18961:
Cryo-electron tomogram of mechanically cryo-milled Yersinia entomophaga delta LC cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-18962:
Cryo-electron tomogram of a lysate preparation of Yersinia entomophaga delta LC cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-18970:
Subtomogram average of M66 filaments in Yersinia entomophaga cells
Method: subtomogram averaging / : Feldmueller M, Afanasyev P, Pilhofer M

EMDB-18971:
Subtomogram average of YenTc-Chi2-sfGFP from Yersinia entomophaga chi2-sfGFP
Method: subtomogram averaging / : Feldmueller M, Pilhofer M

EMDB-18972:
Subtomogram average of YenTc from Yersinia entomophaga MH96
Method: subtomogram averaging / : Feldmueller M, Pilhofer M

EMDB-19370:
Cryo-electron tomogram of Yersinia entomophaga delta YenTc cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-19371:
Cryo-electron tomogram of Yersinia entomophaga delta YenTc cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-19372:
Cryo-electron tomogram of Yersinia entomophaga delta YenTc cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-19373:
Cryo-electron tomogram of Yersinia entomophaga delta YenTc cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-19374:
Cryo-electron tomogram of Yersinia entomophaga chi2-sfGFP cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-19375:
Cryo-electron tomogram of Yersinia entomophaga chi2-sfGFP cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-19376:
Cryo-electron tomogram of Yersinia entomophaga delta LC delta YenTc cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-19377:
Cryo-electron tomogram of Yersinia entomophaga MH96 cells grown at 37 degrees
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-19378:
Cryo-electron tomogram of Yersinia entomophaga delta LC cells grown at 37 degrees
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-19379:
Cryo-electron tomogram of Yersinia entomophaga delta LC delta M66 cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-19380:
Cryo-electron tomogram of Yersinia entomophaga delta LC delta M66 cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-19381:
Cryo-electron tomogram of a lysate preparation of Yersinia entomophaga delta LC delta M66 cells
Method: electron tomography / : Feldmueller M, Pilhofer M

EMDB-11745:
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the baseplate complex in extended state applied 3-fold symmetry.
Method: single particle / : Xu J, Ericson C

EMDB-11734:
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the cap portion in extended state.
Method: single particle / : Xu J, Ericson C

EMDB-11735:
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the sheath-tube module in extended state.
Method: helical / : Xu J, Ericson C

EMDB-11743:
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the baseplate complex in extended state applied 6-fold symmetry.
Method: single particle / : Xu J, Ericson C

EMDB-11744:
Focused refined cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the baseplate complex in extended state applied 6-fold symmetry
Method: single particle / : Xu J, Ericson C, Feldmueller M, Lien YW, Pilhofer M

EMDB-11746:
Cryo-EM structure of the overall extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis
Method: single particle / : Xu J, Ericson C, Feldmueller M, Lien YW, Pilhofer M

EMDB-11747:
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the contracted sheath shell.
Method: helical / : Xu J, Ericson C

EMDB-11748:
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the baseplate complex in contracted state.
Method: single particle / : Xu J, Ericson C, Feldmueller M, Lien YW, Pilhofer M

EMDB-11749:
sub-tomogram averaging of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis
Method: subtomogram averaging / : Xu J, Ericson C, Feldmueller M, Lien YW, Pilhofer M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more