[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 24,467 items for (author: li & sh)

PDB-9unw:
mouse PDCD5-TRiC complex
Method: single particle / : Song QQ, Cong Y

PDB-9uje:
Cryo-EM structure of SARS-CoV2 KP.3.1.1 spike protein
Method: single particle / : He MZ

EMDB-65192:
Cryo-EM structure of the a-KG-OXGR1-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

EMDB-65193:
Cryo-EM structure of the ITA-OXGR1-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

EMDB-65194:
Cryo-EM structure of the A-1-OXGR1-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

EMDB-65222:
Cryo-EM structure of the OXGR1(CA)-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

PDB-9vmn:
Cryo-EM structure of the a-KG-OXGR1-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

PDB-9vmo:
Cryo-EM structure of the ITA-OXGR1-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

PDB-9vmp:
Cryo-EM structure of the A-1-OXGR1-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

PDB-9vo2:
Cryo-EM structure of the OXGR1(CA)-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

EMDB-64748:
Calypso/Asx/NCP-ub complex
Method: single particle / : Wang C, He J

PDB-9v33:
Calypso/Asx/NCP-ub complex
Method: single particle / : Wang C, He J

EMDB-73040:
cryoEM map of Apo Aspergillus fumigatus acetolactate synthase (ALS)
Method: single particle / : Hu Y

EMDB-73041:
cryoEM structure of Aspergillus fumigatus acetolactate synthase (ALS) in complex with a novel inhibitor
Method: single particle / : Hu Y

PDB-9yjz:
cryoEM structure of Apo Aspergillus fumigatus acetolactate synthase (ALS)
Method: single particle / : Hu Y

PDB-9yk0:
cryoEM structure of Aspergillus fumigatus acetolactate synthase (ALS) in complex with a novel inhibitor
Method: single particle / : Hu Y

EMDB-64623:
Cryo-EM structure of the 48-nm repeat doublet microtubule from Tekt1 KO mouse sperm
Method: single particle / : Liu Q, Gui M, Zhou LN

EMDB-64624:
Cryo-EM structure of the 48-nm repeat doublet microtubule from Tekt5 KO mouse sperm
Method: single particle / : Liu Q, Gui M, Zhou LN

EMDB-64625:
Cryo-EM structure of the 48-nm repeat doublet microtubule from Tssk6 KO mouse sperm
Method: single particle / : Liu Q, Gui M, Zhou LN

EMDB-64626:
Cryo-EM structure of the 48-nm repeat doublet microtubule from Dusp21 KO mouse sperm
Method: single particle / : Liu Q, Gui M, Zhou LN

EMDB-70050:
Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (S)-betahydroxyBocK charged NH-tRNAPyl
Method: single particle / : Majumdar C, Kent A, Hamlish N, Zhu C, Cate J

EMDB-70051:
Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPyl
Method: single particle / : Majumdar C, Cate JHD

EMDB-70052:
50S focus refined map of E.coli 70S ribosome complexed with P-site fMet-tRNAfMet and A-site S-beta(2)hydroxyBocK-tRNAPyl
Method: single particle / : Majumdar C, Cate J

EMDB-70054:
30S focus refined map of E.coli 70S ribosome complexed with P-site fMet-tRNAfMet and A-site S-beta(2)hydroxyBocK-tRNAPyl
Method: single particle / : Majumdar C, Cate J

EMDB-70478:
70S global refined map of E.coli 70S ribosome complexed with P-site fMet-tRNAfMet and A-site R-beta(2)hydroxyBocK-tRNAPyl
Method: single particle / : Majumdar C, Cate J

PDB-9o2x:
Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (S)-betahydroxyBocK charged NH-tRNAPyl
Method: single particle / : Majumdar C, Kent A, Hamlish N, Zhu C, Cate J

PDB-9o2y:
Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPyl
Method: single particle / : Majumdar C, Cate JHD

EMDB-70619:
In situ mitoribosome focused on the mtLSU
Method: single particle / : Wang S, Xiong Y, Zhang Y

EMDB-64577:
local ATPase-NCP density map of the ncBAF-nucleosome complex in the ADP-BeFx-bound state
Method: single particle / : Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

PDB-9ux9:
local ATPase-NCP structure of the ncBAF-nucleosome complex in the ADP-BeFx-bound state
Method: single particle / : Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

EMDB-62620:
Cryo-EM structure of SARS-CoV-2 RBD in complex with ACE2 and mAb 1C4
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q, Xia N

EMDB-65522:
Cryo-EM structure of a 1C4 SpyTag-SpyCatcher mi3 nanoparticle
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q

EMDB-65523:
Cryo-EM structure of SARS-CoV-2 WT spike protein in complex with nAb 1C4
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q

PDB-9kwy:
Cryo-EM structure of SARS-CoV-2 RBD in complex with ACE2 and mAb 1C4
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q

PDB-9w14:
Cryo-EM structure of SARS-CoV-2 WT spike protein in complex with nAb 1C4
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q

EMDB-50014:
Structure of the small subunit of the flowering plant mitoribosome with the maturation factor RsgA
Method: single particle / : Waltz F, Skaltsogiannis V, Giege P

PDB-9evt:
Structure of the small subunit of the flowering plant mitoribosome with the maturation factor RsgA
Method: single particle / : Waltz F, Skaltsogiannis V, Giege P

EMDB-63517:
Cryo-EM structure of PTH1R-beta-arrestin1 complex in state 1
Method: single particle / : Zhai X, Guo J, Shen Q, Chen L, Wang G, Shen D, Zhang C, Xu X, Mao C, Zhang Y, Liu Z

PDB-9lz0:
Cryo-EM structure of PTH1R-beta-arrestin1 complex in state 1
Method: single particle / : Zhai X, Guo J, Shen Q, Chen L, Wang G, Shen D, Zhang C, Xu X, Mao C, Zhang Y, Liu Z

EMDB-53204:
Cryo-EM structure of CDK2-cyclin A bound to OTS964
Method: single particle / : McGeoch AJS, Cushing VI, Cronin NB, Alfieri C, Greber BJ

EMDB-53205:
Cryo-EM structure of the human CAK bound to OTS964
Method: single particle / : McGeoch AJS, Cushing VI, Cronin NB, Alfieri C, Greber BJ

EMDB-53221:
Cryo-EM structure of the CDK11B-cyclin L2-SAP30BP bound to OTS964 (conformation 1)
Method: single particle / : McGeoch AJS, Cushing VI, Cronin NB, Alfieri C, Greber BJ

EMDB-53224:
Cryo-EM structure of CDK11B-cyclin L2-SAP30BP bound to AMP-PNP
Method: single particle / : McGeoch AJS, Cushing VI, Cronin NB, Alfieri C, Greber BJ

EMDB-56971:
Molecular basis of ZPD homopolymerization: cryo-EM structure of a native vertebrate egg coat filament
Method: single particle / : Banjara S, Okumura H, Jovine L

EMDB-64935:
Lectin FRIL from Lablab purpureus complexed to Lewis X tetrasaccharide
Method: single particle / : Nguyen VHT, Chen X, Liu YM, Ma C

EMDB-64936:
Lectin FRIL from Lablab purpureus with self glycan
Method: single particle / : Nguyen VHT, Liu YM, Chen X, Ma C

EMDB-64937:
Lectin FRIL from Lablab purpureus complexed to oligomannose
Method: single particle / : Nguyen VHT, Liu YM, Ma C

EMDB-64938:
Lectin FRIL from Lablab purpureus complexed to oligomannose
Method: single particle / : Nguyen VHT, Liu YM, Ma C

EMDB-70055:
50S focus refined map of E.coli 70S ribosome complexed with P-site fMet-tRNAfMet and A-site R-beta(2)hydroxyBocK-tRNAPyl
Method: single particle / : Majumdar C, Cate J

EMDB-70056:
30S focus refined map of E.coli 70S ribosome complexed with P-site fMet-tRNAfMet and A-site R-beta(2)hydroxyBocK-tRNAPyl
Method: single particle / : Majumdar C, Cate J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more