[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 15,478 items for (author: li & et)

EMDB-56597:
Tau filament with D252V mutation
Method: helical / : Qi C, Lovestam S, Scheres HWS, Goedert M

EMDB-56599:
Tau filament with G272V mutation
Method: helical / : Qi C, Lovestam S, Scheres HWS, Goedert M

EMDB-56600:
Tau filament with delG389_I392 mutation
Method: helical / : Qi C, Lovestam S, Scheres HWS, Goedert M

EMDB-56601:
Tau filament with S320F mutation
Method: helical / : Qi C, Lovestam S, Scheres HWS, Goedert M

PDB-28lj:
Tau filament with D252V mutation
Method: helical / : Qi C, Lovestam S, Scheres HWS, Goedert M

PDB-28lo:
Tau filament with G272V mutation
Method: helical / : Qi C, Lovestam S, Scheres HWS, Goedert M

PDB-28lp:
Tau filament with delG389_I392 mutation
Method: helical / : Qi C, Lovestam S, Scheres HWS, Goedert M

PDB-28lq:
Tau filament with S320F mutation
Method: helical / : Qi C, Lovestam S, Scheres HWS, Goedert M

EMDB-73392:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody AB2-122 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Jonaid G, Batra H, Kibria G, Chen B, Alt FW

EMDB-73457:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody S212 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Batra H, Zhang J, Jonaid G, Kibria G, Chen B, Alt FW

PDB-9ysg:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody AB2-122 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Jonaid G, Batra H, Kibria G, Chen B, Alt FW

PDB-9ytc:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody S212 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Batra H, Zhang J, Jonaid G, Kibria G, Chen B, Alt FW

EMDB-54890:
Consensus map of ternary PROTAC-mediated complex consisting of Cereblon, DDB1 and BRD4-BD1, non-covalently linked by JQ1-AcN
Method: single particle / : Fischer G, Peter D, Arce-Solano S, Kessler D

EMDB-54891:
Focussed map of ternary PROTAC-mediated complex consisting of Cereblon, DDB1 and BRD4-BD1, non-covalently linked by JQ1-AcN
Method: single particle / : Fischer G, Peter D, Arce-Solano S, Kessler D

EMDB-65477:
2255-bound TAAR1-Gs protein complex
Method: single particle / : Liu H, Huang S, Shoichet BK, Xu HE

PDB-9vz3:
2255-bound TAAR1-Gs protein complex
Method: single particle / : Liu H, Huang S, Shoichet BK, Xu HE

EMDB-55929:
Structure of human CLN8 in an apo-state
Method: single particle / : Lacabanne D, Sheokand PK, Ruprecht JJ, Petkevicius K

EMDB-56021:
Structure of human CLN8 in the presence of docosahexaenoate
Method: single particle / : Lacabanne D, Sheokand PK, Ruprecht JJ, Petkevicius K

EMDB-56022:
Structure of human CLN8 in the presence of oleate
Method: single particle / : Lacabanne D, Sheokand PK, Ruprecht JJ, Petkevicius K

EMDB-65476:
7482-bound TAAR1-Gs protein complex
Method: single particle / : Liu H, Huang S, Shoichet BK, Xu HE

PDB-9vz2:
7482-bound TAAR1-Gs protein complex
Method: single particle / : Liu H, Huang S, Shoichet BK, Xu HE

EMDB-58048:
Complex of transglutaminase 2 and the 45 kDa domain of fibronectin
Method: single particle / : Heggelund JE, Ali-Ahmad A, Sekulic N, Sollid LM

PDB-30uc:
Complex of transglutaminase 2 and the 45 kDa domain of fibronectin
Method: single particle / : Heggelund JE, Ali-Ahmad A, Sekulic N, Sollid LM

EMDB-71555:
Cryo-EM structure of full-length human TRPV1 in complex with analgesic MSP20
Method: single particle / : Neuberger A, Talyzina IA, Romeo I, Aiello F, Maramai S, Alcaro S, Artese A, Brizzi A, Sobolevsky AI

PDB-9pea:
Cryo-EM structure of full-length human TRPV1 in complex with analgesic MSP20
Method: single particle / : Neuberger A, Talyzina IA, Romeo I, Aiello F, Maramai S, Alcaro S, Artese A, Brizzi A, Sobolevsky AI

EMDB-48061:
Octopus ribosome, hybrid 80S
Method: single particle / : Gao J, Yip MCJ, Han R, Grearson A, Shao S, Lee ASY

PDB-9eho:
Octopus ribosome, hybrid 80S
Method: single particle / : Gao J, Yip MCJ, Han R, Grearson A, Shao S, Lee ASY

EMDB-75346:
Membrane protein solubilization and structure determination using de novo-designed amphipathic proteins
Method: single particle / : Borst AJ, Weidle C

EMDB-75350:
WRAP-TP0698
Method: single particle / : Borst AJ

EMDB-55847:
DalDro bound to the terminating Escherichia coli 70S ribosome
Method: single particle / : Berger MJ, Safdari HA, Wilson DN

PDB-9tey:
DalDro bound to the terminating Escherichia coli 70S ribosome
Method: single particle / : Berger MJ, Safdari HA, Wilson DN

EMDB-55135:
Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55136:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55137:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55139:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55636:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9sra:
Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9srb:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9src:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9sre:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9t7h:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-75152:
Nucleosome containing an 8oxoG:A at SHL-6
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-75153:
Nucleosome containing an 8oxoG:A at SHL+4
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-75154:
Nucleosome containing an 8oxoG:A at SHL+3
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-75155:
Nucleosome containing an 8oxoG:A at SHL+2
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-75156:
Nucleosome containing an 8oxoG at SHL+3
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-75157:
Nucleosome containing an 8oxoG at SHL+2
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-54307:
VPS34-CI bound to NRBF2 and RAB1A, focused refinement on the kinase arm
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54308:
VPS34-CI bound to NRBF2 and RAB1A, focused refinement on the adaptor arm
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54309:
VPS34-CI bound to NRBF2 and RAB1A, focused refinement on the interface between RAB1A and VPS34
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more