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Showing all 18 items for (author: levitt & m)

EMDB-2394:
Architecture of an RNA polymerase II transcription pre-initiation complex
Method: single particle / : Murakami K, Elmlund H, Kalisman N, Bushnell DA, Adams CM, Azubel M, Elmlund D, Levi-Kalisman Y, Liu X, Levitt M, Kornberg RD

PDB-4a0o:
Symmetry-free cryo-EM map of TRiC in the nucleotide-free (apo) state
Method: single particle / : Cong Y, Schroder GF, Meyer AS, Jakana J, Ma B, Dougherty MT, Schmid MF, Reissmann S, Levitt M, Ludtke SL, Frydman J, Chiu W

PDB-4a0v:
model refined against the Symmetry-free cryo-EM map of TRiC-AMP-PNP
Method: single particle / : Cong Y, Schroder GF, Meyer AS, Jakana J, Ma B, Dougherty MT, Schmid MF, Reissmann S, Levitt M, Ludtke SL, Frydman J, Chiu W

PDB-4a0w:
model built against symmetry-free cryo-EM map of TRiC-ADP-AlFx
Method: single particle / : Cong Y, Schroder GF, Meyer AS, Jakana J, Ma B, Dougherty MT, Schmid MF, Reissmann S, Levitt M, Ludtke SL, Frydman J, Chiu W

PDB-4a13:
model refined against symmetry-free cryo-EM map of TRiC-ADP
Method: single particle / : Cong Y, Schroder GF, Meyer AS, Jakana J, Ma B, Dougherty MT, Schmid MF, Reissmann S, Levitt M, Ludtke SL, Frydman J, Chiu W

EMDB-1960:
Symmetry-free cryo-EM map of TRiC in the nucleotide-free (apo) state
Method: single particle / : Cong Y, Schroder GF, Meyer AS, Jakana J, Ma B, Dougherty MT, Schmid MF, Reissmann S, Levitt M, Ludtke SL, Frydman J, Chiu W

EMDB-1961:
Symmetry-free cryo-EM map of TRiC-AMP-PNP
Method: single particle / : Cong Y, Schroder GF, Meyer AS, Jakana J, Ma B, Dougherty MT, Schmid MF, Reissmann S, Levitt M, Ludtke SL, Frydman J, Chiu W

EMDB-1962:
Symmetry-free cryo-EM map of TRiC-ADP-AlFx
Method: single particle / : Cong Y, Schroder GF, Meyer AS, Jakana J, Ma B, Dougherty MT, Schmid MF, Reissmann S, Levitt M, Ludtke SL, Frydman J, Chiu W

EMDB-1963:
Symmetry-free cryo-EM map of TRiC-ADP
Method: single particle / : Cong Y, Schroder GF, Meyer AS, Jakana J, Ma B, Dougherty MT, Schmid MF, Reissmann S, Levitt M, Ludtke SL, Frydman J, Chiu W

PDB-3j02:
Lidless D386A Mm-cpn in the pre-hydrolysis ATP-bound state
Method: single particle / : Zhang J, Ma B, DiMaio F, Douglas NR, Joachimiak L, Baker D, Frydman J, Levitt M, Chiu W

PDB-3j03:
Lidless Mm-cpn in the closed state with ATP/AlFx
Method: single particle / : Zhang J, Ma B, DiMaio F, Douglas NR, Joachimiak L, Baker D, Frydman J, Levitt M, Chiu W

EMDB-5258:
Lidless D386A Mm-cpn in the pre-hydrolysis ATP-bound state
Method: single particle / : Zhang J, Ma B, DiMaio F, Douglas NR, Joachimiak L, Baker D, Frydman J, Levitt M, Chiu W

PDB-3los:
Atomic Model of Mm-cpn in the Closed State
Method: single particle / : Zhang J, Baker ML, Schroeder G, Douglas NR, Reissmann S, Jakana J, Dougherty M, Fu CJ, Levitt M, Ludtke SJ, Frydman J, Chiu W

EMDB-5137:
Wildtype Mm-cpn in the closed state
Method: single particle / : Zhang J, Baker ML, Schroeder G, Douglas NR, Reissmann S, Jakana J, Dougherty M, Fu CJ, Levitt M, Ludtke SJ, Frydman J, Chiu W

EMDB-5138:
Lidless Mm-cpn in the closed state
Method: single particle / : Zhang J, Baker ML, Schroeder G, Douglas NR, Reissmann S, Jakana J, Dougherty M, Fu CJ, Levitt M, Ludtke SJ, Frydman J, Chiu W

EMDB-5139:
Wildtype Mm-cpn in the open state
Method: single particle / : Zhang J, Baker ML, Schroeder G, Douglas NR, Reissmann S, Jakana J, Dougherty M, Fu CJ, Levitt M, Ludtke SJ, Frydman J, Chiu W

EMDB-5140:
Lidless Mm-cpn in the open state
Method: single particle / : Zhang J, Baker ML, Schroeder G, Douglas NR, Reissmann S, Jakana J, Dougherty M, Fu CJ, Levitt M, Ludtke SJ, Frydman J, Chiu W

PDB-3iyf:
Atomic Model of the Lidless Mm-cpn in the Open State
Method: single particle / : Zhang J, Baker ML, Schroeder G, Douglas NR, Reissmann S, Jakana J, Dougherty M, Fu CJ, Levitt M, Ludtke SJ, Frydman J, Chiu W

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

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Related info.:EMN Search / EMN Statistics

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Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

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