[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 26 items for (author: lane & tr)

EMDB-47765:
Week 26 C3V5, gp41-GH and gp41-base epitope polyclonal antibodies from participant 202 in complex with ConM SOSIP
Method: single particle / : Lin RN, Torres JL, Tran AS, Ozorowski G, Ward AB

EMDB-49521:
HIV-1 Reverse Transcriptase with New Non-Nucleoside Reverse Transcriptase Inhibitor 12126065
Method: single particle / : Young MA, Lane TR, Raman R, Nelson JAE, Riabova O, Kazakova E, Monakhova N, Tsedilin A, Rees SD, Quinnell D, Chang G, Ekins S

EMDB-42375:
Deinococcus aerius TR0125 C-glucosyl deglycosidase (CGD), cryo-EM
Method: single particle / : Furlanetto V, Kalyani DC, Kostelac A, Haltrich D, Hallberg BM, Divne C

PDB-8umc:
Deinococcus aerius TR0125 C-glucosyl deglycosidase (CGD), cryo-EM
Method: single particle / : Furlanetto V, Kalyani DC, Kostelac A, Haltrich D, Hallberg BM, Divne C

EMDB-28825:
Human CCC complex
Method: single particle / : Healy MD, McNally KE, Butkovic R, Chilton M, Kato K, Sacharz J, McConville C, Moody ERR, Shaw S, Planelles-Herrero VJ, Kadapalakere SY, Ross J, Borucu U, Palmer CS, Chen K, Croll TI, Hall RJ, Caruana NJ, Ghai R, Nguyen THD, Heesom KJ, Saitoh S, Berger I, Berger-Schaffitzel C, Williams TA, Stroud DA, Derivery E, Collins BM, Cullen PJ

EMDB-28827:
Human CCC complex
Method: single particle / : Healy MD, McNally KE, Butkovic R, Chilton M, Kato K, Sacharz J, McConville C, Moody ERR, Shaw S, Planelles-Herrero VJ, Kadapalakere SY, Ross J, Borucu U, Palmer CS, Chen K, Croll TI, Hall RJ, Caruana NJ, Ghai R, Nguyen THD, Heesom KJ, Saitoh S, Berger I, Berger-Schaffitzel C, Williams TA, Stroud DA, Derivery E, Collins BM, Cullen PJ

PDB-8f2r:
Human CCC complex
Method: single particle / : Healy MD, McNally KE, Butkovic R, Chilton M, Kato K, Sacharz J, McConville C, Moody ERR, Shaw S, Planelles-Herrero VJ, Kadapalakere SY, Ross J, Borucu U, Palmer CS, Chen K, Croll TI, Hall RJ, Caruana NJ, Ghai R, Nguyen THD, Heesom KJ, Saitoh S, Berger I, Berger-Schaffitzel C, Williams TA, Stroud DA, Derivery E, Collins BM, Cullen PJ

PDB-8f2u:
Human CCC complex
Method: single particle / : Healy MD, McNally KE, Butkovic R, Chilton M, Kato K, Sacharz J, McConville C, Moody ERR, Shaw S, Planelles-Herrero VJ, Kadapalakere SY, Ross J, Borucu U, Palmer CS, Chen K, Croll TI, Hall RJ, Caruana NJ, Ghai R, Nguyen THD, Heesom KJ, Saitoh S, Berger I, Berger-Schaffitzel C, Williams TA, Stroud DA, Derivery E, Collins BM, Cullen PJ

EMDB-25765:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain native virion
Method: single particle / : Fu J, Klose T

EMDB-25772:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain virion in complex with inhibitor 11526092
Method: single particle / : Fu J, Klose T

EMDB-25773:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain virion in complex with pleconaril
Method: single particle / : Fu J, Klose T

EMDB-25774:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain in complex with inhibitor 11526091 (no/low occupancy-no inhibitor modeled)
Method: single particle / : Fu J, Klose T

EMDB-25776:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain in complex with inhibitor 11526093 (no/low occupancy-no inhibitor modeled)
Method: single particle / : Fu J, Klose T

PDB-7t9p:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain native virion
Method: single particle / : Fu J, Klose T, Kuhn RJ, Center for Structural Genomics of Infectious Diseases (CSGID)

PDB-7taf:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain virion in complex with inhibitor 11526092
Method: single particle / : Fu J, Klose T, Kuhn RJ, Center for Structural Genomics of Infectious Diseases (CSGID)

PDB-7tag:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain virion in complex with pleconaril
Method: single particle / : Fu J, Klose T, Kuhn RJ, Center for Structural Genomics of Infectious Diseases (CSGID)

PDB-7tah:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain in complex with inhibitor 11526091 (no/low occupancy-no inhibitor modeled)
Method: single particle / : Fu J, Klose T, Kuhn RJ, Center for Structural Genomics of Infectious Diseases (CSGID)

PDB-7taj:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain in complex with inhibitor 11526093 (no/low occupancy-no inhibitor modeled)
Method: single particle / : Fu J, Klose T, Kuhn RJ, Center for Structural Genomics of Infectious Diseases (CSGID)

EMDB-23564:
Cryo-EM structure of ConSOSL.UFO.664 (ConS) in complex with bNAb PGT122
Method: single particle / : Martin GM, Ward AB

EMDB-23565:
Cryo-EM structure of EDC-crosslinked ConSOSL.UFO.664 (ConS-EDC) in complex with bNAb PGT122
Method: single particle / : Martin GM, Ward AB

EMDB-23571:
Cryo-EM structure of ConM SOSIP.v7 (ConM) in complex with bNAb PGT122
Method: single particle / : Martin GM, Ward AB

EMDB-23572:
Cryo-EM structure of EDC-crosslinked ConM SOSIP.v7 (ConM-EDC) in complex with bNAb PGT122
Method: single particle / : Martin GM, Ward AB

PDB-7lx2:
Cryo-EM structure of ConSOSL.UFO.664 (ConS) in complex with bNAb PGT122
Method: single particle / : Martin GM, Ward AB, Sattentau QJ

PDB-7lx3:
Cryo-EM structure of EDC-crosslinked ConSOSL.UFO.664 (ConS-EDC) in complex with bNAb PGT122
Method: single particle / : Martin GM, Ward AB, Sattentau QJ

PDB-7lxm:
Cryo-EM structure of ConM SOSIP.v7 (ConM) in complex with bNAb PGT122
Method: single particle / : Martin GM, Ward AB, Sattentau QJ

PDB-7lxn:
Cryo-EM structure of EDC-crosslinked ConM SOSIP.v7 (ConM-EDC) in complex with bNAb PGT122
Method: single particle / : Martin GM, Ward AB, Sattentau QJ

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more