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Showing all 41 items for (author: krogan & nj)

EMDB-44306:
Cryo-EM structure of human dynactin complex bound to Chlamydia effector Dre1
Method: single particle / : Pawar KI, Verba KA

EMDB-44333:
Cryo-EM structure of human dynactin complex bound to Chlamydia effector Dre1
Method: single particle / : Pawar KI, Verba KA

EMDB-41315:
16-nm repeating structure of A-tubule from mouse sperm flagella
Method: subtomogram averaging / : Chen Z, Shiozak M, Hass KM, Skinner W, Zhao S, Guo C, Polacco BJ, Yu Z, Krogan NJ, Kaake RM, Vale RD, Agard DA

EMDB-41316:
16-nm repeating structure of B-tubule from mouse sperm flagella
Method: subtomogram averaging / : Chen Z, Shiozak M, Hass KM, Skinner W, Zhao S, Guo C, Polacco BJ, Yu Z, Krogan NJ, Kaake RM, Vale RD, Agard DA

EMDB-41317:
CryoET reconstruction of 48-nm repeat doublet microtubule from human sperm
Method: subtomogram averaging / : Chen Z, Shiozak M, Hass KM, Skinner W, Zhao S, Guo C, Polacco BJ, Yu Z, Krogan NJ, Kaake RM, Vale RD, Agard DA

EMDB-41320:
48 nm-repeating structure of doublets from Tektin5-KO mouse sperm axoneme
Method: subtomogram averaging / : Chen Z, Shiozak M, Hass KM, Skinner W, Zhao S, Guo C, Polacco BJ, Yu Z, Krogan NJ, Kaake RM, Vale RD, Agard DA

EMDB-41431:
48-nm repeating structure of doublets from mouse sperm flagella
Method: subtomogram averaging / : Chen Z, Shiozak M, Hass KM, Skinner W, Zhao S, Guo C, Polacco BJ, Yu Z, Krogan NJ, Kaake RM, Vale RD, Agard DA

EMDB-41450:
Focused reconstruction of mouse doublet (register #1)
Method: subtomogram averaging / : Chen Z, Shiozak M, Hass KM, Skinner W, Zhao S, Guo C, Polacco BJ, Yu Z, Krogan NJ, Kaake RM, Vale RD, Agard DA

EMDB-41451:
Focused reconstruction of doublets from mouse sperm (register #2)
Method: subtomogram averaging / : Chen Z, Shiozak M, Hass KM, Skinner W, Zhao S, Guo C, Polacco BJ, Yu Z, Krogan NJ, Kaake RM, Vale RD, Agard DA

PDB-8to0:
48-nm repeating structure of doublets from mouse sperm flagella
Method: subtomogram averaging / : Chen Z, Shiozak M, Hass KM, Skinner W, Zhao S, Guo C, Polacco BJ, Yu Z, Krogan NJ, Kaake RM, Vale RD, Agard DA

EMDB-36294:
Legionella effector protein SidI
Method: single particle / : Wang L, Subramanian A, Mukherjee S, Walter P

EMDB-27630:
Structure of the PEAK3/14-3-3 complex
Method: single particle / : Torosyan H, Paul M, Jura N, Verba KA

EMDB-27684:
Structure of the PEAK3 pseudokinase homodimer
Method: single particle / : Torosyan H, Paul M, Jura N, Verba KA

PDB-8dp5:
Structure of the PEAK3/14-3-3 complex
Method: single particle / : Torosyan H, Paul M, Jura N, Verba KA

PDB-8ds6:
Structure of the PEAK3 pseudokinase homodimer
Method: single particle / : Torosyan H, Paul M, Jura N, Verba KA

EMDB-26574:
KS-AT di-domain of mycobacterial Pks13 with endogenous KS ligand bound
Method: single particle / : Kim SK, Dickinson MS, Finer-Moore JS, Rosenberg OS, Stroud RM

EMDB-27002:
ACP1-KS-AT domains of mycobacterial Pks13
Method: single particle / : Kim SK, Dickinson MS, Finer-Moore JS, Rosenberg OS, Stroud RM

EMDB-27003:
KS-AT domains of mycobacterial Pks13 with inward AT conformation
Method: single particle / : Kim SK, Dickinson MS, Finer-Moore JS, Rosenberg OS, Stroud RM

EMDB-27004:
KS-AT domains of mycobacterial Pks13 with outward AT conformation
Method: single particle / : Kim SK, Dickinson MS, Finer-Moore JS, Rosenberg OS, Stroud RM

EMDB-27005:
ACP1-KS-AT domains of mycobacterial Pks13
Method: single particle / : Kim SK, Dickinson MS, Finer-Moore JS, Rosenberg OS, Stroud RM

EMDB-25401:
5-HT2B receptor bound to LSD obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Barros-Alvarez X, Cao C

EMDB-25402:
5-HT2B receptor bound to LSD in complex with heterotrimeric mini-Gq protein obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Barros-Alvarez X, Kim K

EMDB-25403:
5-HT2B receptor bound to LSD in complex with beta-arrestin1 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Barros-Alvarez X, Cao C, Panova O, Roth BL, Skiniotis G

EMDB-23441:
Structure of human SetD3 methyl-transferase in complex with 2A protease from Coxsackievirus B3
Method: single particle / : Verba KA, Schulze-Gahmen U

EMDB-23970:
Full length SARS-CoV-2 Nsp2
Method: single particle / : QCRG Structural Biology Consortium

EMDB-23971:
SARS-CoV-2 Nsp2
Method: single particle / : QCRG Structural Biology Consortium

PDB-7msw:
Full length SARS-CoV-2 Nsp2
Method: single particle / : QCRG Structural Biology Consortium

PDB-7msx:
SARS-CoV-2 Nsp2
Method: single particle / : QCRG Structural Biology Consortium

EMDB-22907:
SARS-CoV-2 Spike bound to Nb6 in closed conformation
Method: single particle / : Schoof MS, Faust BF

EMDB-22908:
SARS-CoV-2 Spike bound to Nb6 in open conformation
Method: single particle / : Schoof MS, Faust BF, Saunders RA, Sangwan S, Rezelj V, Hoppe N, Boone M, Billesboelle CB, Puchades C, Azumaya CM, Kratochvil HT, Zimanyi M, Desphande I, Liang J, Dickinson S, Nguyen HC, Chio CM, Merz GE, Thompson MC, Diwanji D, Schaefer K, Anand AA, Dobzinski N, Zha BS, Simoneau CR, Leon K, White KM, Chio US, Gupta M, Jin M, Li F, Liu Y, Zhang K, Bulkley D, Sun M, Smith AM, Rizo AN, Moss F, Brilot AF, Pourmal S, Trenker R, Pospiech T, Gupta S, Barsi-Rhyne B, Belyy V, Barile-Hill AW, Nock S, Krogan NJ, Ralston CY, Swaney DL, Garcia-Sastre A, Ott M, Vignuzzi M, Walter P, Manglik A, QCRG Structural Biology Consortium

EMDB-22909:
SARS-CoV-2 Spike bound to Nb11 in closed conformation
Method: single particle / : Schoof MS, Faust BF, Saunders RA, Sangwan S, Rezelj V, Hoppe N, Boone M, Billesboelle CB, Puchades C, Azumaya CM, Kratochvil HT, Zimanyi M, Desphande I, Liang J, Dickinson S, Nguyen HC, Chio CM, Merz GE, Thompson MC, Diwanji D, Schaefer K, Anand AA, Dobzinski N, Zha BS, Simoneau CR, Leon K, White KM, Chio US, Gupta M, Jin M, Li F, Liu Y, Zhang K, Bulkley D, Sun M, Smith AM, Rizo AN, Moss F, Brilot AF, Pourmal S, Trenker R, Pospiech T, Gupta S, Barsi-Rhyne B, Belyy V, Barile-Hill AW, Nock S, Krogan NJ, Ralston CY, Swaney DL, Garcia-Sastre A, Ott M, Vignuzzi M, Walter P, Manglik A, QCRG Structural Biology Consortium

EMDB-22910:
SARS-CoV-2 Spike bound to mNb6 in closed conformation
Method: single particle / : Schoof MS, Faust BF

EMDB-22911:
SARS-CoV-2 Spike bound to Nb11 in open conformation
Method: single particle / : Schoof MS, Faust BF, Saunders RA, Sangwan S, Rezelj V, Hoppe N, Boone M, Billesboelle CB, Puchades C, Azumaya CM, Kratochvil HT, Zimanyi M, Desphande I, Liang J, Dickinson S, Nguyen HC, Chio CM, Merz GE, Thompson MC, Diwanji D, Schaefer K, Anand AA, Dobzinski N, Zha BS, Simoneau CR, Leon K, White KM, Chio US, Gupta M, Jin M, Li F, Liu Y, Zhang K, Bulkley D, Sun M, Smith AM, Rizo AN, Moss F, Brilot AF, Pourmal S, Trenker R, Pospiech T, Gupta S, Barsi-Rhyne B, Belyy V, Barile-Hill AW, Nock S, Krogan NJ, Ralston CY, Swaney DL, Garcia-Sastre A, Ott M, Vignuzzi M, Walter P, Manglik A, QCRG Structural Biology Consortium

PDB-7kkk:
SARS-CoV-2 Spike in complex with neutralizing nanobody Nb6
Method: single particle / : Schoof MS, Faust BF, Saunders RA, Sangwan S, Rezelj V, Hoppe N, Boone M, Billesboelle CB, Puchades C, Azumaya CM, Kratochvil HT, Zimanyi M, Desphande I, Liang J, Dickinson S, Nguyen HC, Chio CM, Merz GE, Thompson MC, Diwanji D, Schaefer K, Anand AA, Dobzinski N, Zha BS, Simoneau CR, Leon K, White KM, Chio US, Gupta M, Jin M, Li F, Liu Y, Zhang K, Bulkley D, Sun M, Smith AM, Rizo AN, Moss F, Brilot AF, Pourmal S, Trenker R, Pospiech T, Gupta S, Barsi-Rhyne B, Belyy V, Barile-Hill AW, Nock S, Liu Y, Krogan NJ, Ralston CY, Swaney DL, Garcia-Sastre A, Ott M, Vignuzzi M, Walter P, Manglik A, QCRG Structural Biology Consortium

PDB-7kkl:
SARS-CoV-2 Spike in complex with neutralizing nanobody mNb6
Method: single particle / : Schoof MS, Faust BF, Saunders RA, Sangwan S, Rezelj V, Hoppe N, Boone M, Billesboelle CB, Puchades C, Azumaya CM, Kratochvil HT, Zimanyi M, Desphande I, Liang J, Dickinson S, Nguyen HC, Chio CM, Merz GE, Thompson MC, Diwanji D, Schaefer K, Anand AA, Dobzinski N, Zha BS, Simoneau CR, Leon K, White KM, Chio US, Gupta M, Jin M, Li F, Liu Y, Zhang K, Bulkley D, Sun M, Smith AM, Rizo AN, Moss F, Brilot AF, Pourmal S, Trenker R, Pospiech T, Gupta S, Barsi-Rhyne B, Belyy V, Barile-Hill AW, Nock S, Liu Y, Krogan NJ, Ralston CY, Swaney DL, Garcia-Sastre A, Ott M, Vignuzzi M, Walter P, Manglik A, QCRG Structural Biology Consortium

EMDB-22829:
Human Tom70 in complex with SARS CoV2 Orf9b
Method: single particle / : QCRG Structural Biology Consortium

PDB-7kdt:
Human Tom70 in complex with SARS CoV2 Orf9b
Method: single particle / : QCRG Structural Biology Consortium

EMDB-1865:
Structure of the yeast eisosome core component Lsp1 filament
Method: helical / : Karotki L, Huiskonen JT, Stefan CJ, Roth R, Surma MA, Aguilar PS, Krogan NJ, Emr SD, Heuser J, Gruenewald K, Walther TC

EMDB-1866:
Structure of the yeast eisosome core component Lsp1 filament
Method: helical / : Karotki L, Huiskonen JT, Stefan CJ, Roth R, Surma MA, Aguilar PS, Krogan NJ, Emr SD, Heuser J, Gruenewald K, Walther TC

EMDB-1867:
Structure of the yeast eisosome core component Lsp1 filament bound to a liposome membrane.
Method: helical / : Karotki L, Huiskonen JT, Stefan CJ, Roth R, Surma MA, Aguilar PS, Krogan NJ, Emr SD, Heuser J, Gruenewald K, Walther TC

EMDB-1868:
Structure of the yeast eisosome core component Pil1 filament bound to a liposome membrane.
Method: helical / : Karotki L, Huiskonen JT, Stefan CJ, Roth R, Surma MA, Aguilar PS, Krogan NJ, Emr SD, Heuser J, Gruenewald K, Walther TC

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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