[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 25 items for (author: kristoffersen & el)

EMDB-55635:
The Traptamer with 2'-Fluoro-modified pyrimidines (FY RNA)
Method: single particle / : Kristoffersen EL, Andersen ES, Zwergius NH

EMDB-55621:
2'-fluoro-modified pyrimidine (FY) RNA aptamer binding to the receptor binding domain (RBD) of the SARS-CoV-2 spike protein. (focus map: PXT origami 'pointer')
Method: single particle / : Kristoffersen EL, Andersen ES, Zwergious NH

EMDB-55622:
2'-fluoro-modified pyrimidine (FY) RNA aptamer binding to the receptor binding domain (RBD) of the SARS-CoV-2 spike protein. (focus map: Spike core)
Method: single particle / : Kristoffersen EL, Andersen ES, Zwergious NH

EMDB-55623:
2'-fluoro-modified pyrimidine (FY) RNA aptamer binding to the receptor binding domain (RBD) of the SARS-CoV-2 spike protein (Full map, no symmetry)
Method: single particle / : Kristoffersen EL, Andersen ES, Zwergious NH

EMDB-55624:
2'-fluoro-modified pyrimidine (FY) RNA aptamer binding to the receptor binding domain (RBD) of the SARS-CoV-2 spike protein. (focus map: Spike N-terminal domain (NTD))
Method: single particle / : Kristoffersen EL, Andersen ES, Zwergious NH

EMDB-55625:
2'-fluoro-modified pyrimidine (FY) RNA aptamer binding to the receptor binding domain (RBD) of the SARS-CoV-2 spike protein. (focus map: RBD-aptamer)
Method: single particle / : Kristoffersen EL, Andersen ES, Zwergious NH

EMDB-55626:
3-helix origami tile + Broccoli and Pepper aptamers (3HT-BP) with 2'-Fluoro-modified pyrimidines (FY RNA)
Method: single particle / : Kristoffersen EL, Andersen ES, Zwergius NH

EMDB-52634:
Single particle cryo electron microscopy of a Fab fragment bound to recombinant human CD40 ligand
Method: single particle / : Kristoffersen EL, Schinkel T, Andersen ES

PDB-9i5n:
Single particle cryo electron microscopy of a Fab fragment bound to recombinant human CD40 ligand
Method: single particle / : Kristoffersen EL, Schinkel T, Andersen ES

EMDB-53787:
Paranemic crossover triangle (PXT) with 2'-Fluoro-modified pyrimidines (FY RNA)
Method: single particle / : Kristoffersen EL, Andersen ES, Zwergius NH

EMDB-53795:
5-Helix Tile - Twist Corrected (5HT-TC) with 2'-Fluoro-modified pyrimidines (FY RNA)
Method: single particle / : Kristoffersen EL, Andersen ES, Zwergius NH

EMDB-53803:
6-Helix Bundle - with a Clasp (6HB-C)-monomer with 2'-Fluoro-modified pyrimidines (FY RNA)
Method: single particle / : Kristoffersen EL, Andersen ES, Zwergius NH

EMDB-53353:
Structure of Oceanobacillus iheyensis group II intron domains D1-D6
Method: single particle / : Jadhav SS, Nigro M, Marcia M

PDB-9qtj:
Structure of Oceanobacillus iheyensis group II intron domains D1-D6
Method: single particle / : Jadhav SS, Nigro M, Marcia M

EMDB-19759:
Small circular RNA dimer - Class 3
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

PDB-8s6w:
Small circular RNA dimer - Class 3
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

EMDB-51918:
Small circular RNA dimer - Class 1
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

EMDB-51929:
Small circular RNA dimer - Class 2
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

EMDB-51932:
Small circular RNA dimer - Class 4
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

EMDB-51934:
Small circular RNA dimer - Class 5
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

PDB-9h82:
Small circular RNA dimer - Class 1
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

PDB-9h83:
Small circular RNA dimer - Class 2
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

PDB-9h86:
Small circular RNA dimer - Class 4
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

PDB-9h8a:
Small circular RNA dimer - Class 5
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

EMDB-40984:
5TU-t1 - heterodimeric triplet polymerase ribozyme
Method: single particle / : McRae EKS, Kristoffersen E, Gallego I, Hansen K, Holliger P, Andersen ES

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more