[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 20,526 items for (author: ko & a)

EMDB-75268:
Native flagellar filament from Leptospira interrogans
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

EMDB-75269:
Native flagellar filament from Leptospira interrogans flaB1- KO mutant strain
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

EMDB-75270:
Native flagellar filament from Leptospira biflexa
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

PDB-10lk:
Native flagellar filament from Leptospira interrogans
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

PDB-10ll:
Native flagellar filament from Leptospira interrogans flaB1- KO mutant strain
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

PDB-10lm:
Native flagellar filament from Leptospira biflexa
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

EMDB-75707:
Apo human TRPV2, wild-type
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

EMDB-75708:
Apo human TRPV2, S651H/T654D/D655N
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

EMDB-75709:
2-APB bound human TRPV2, S651H/T654D/D655N
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

EMDB-75711:
apo rat TRPV2, H651S/D654T/N655D
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

EMDB-75712:
2-APB bound rat TRPV2, H651S/D654T/N655D
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

PDB-11hz:
Apo human TRPV2, wild-type
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

PDB-11ia:
Apo human TRPV2, S651H/T654D/D655N
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

PDB-11ib:
2-APB bound human TRPV2, S651H/T654D/D655N
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

PDB-11id:
apo rat TRPV2, H651S/D654T/N655D
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

PDB-11ie:
2-APB bound rat TRPV2, H651S/D654T/N655D
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

EMDB-72226:
Rad55-Rad57-SHU bound to ssDNA with AMP-PNP. Local map focused on 55/57
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72228:
Rad55-Rad57-SHU
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72229:
Rad55-Rad57-SHU - Composite map
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72237:
Rad55-Rad57-SHU-Rad51
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72241:
"Rad55-Rad57-SHU-Rad51 - Composite map
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72268:
Rad55-Rad57-SHU homologous recombination complex. Local refinement on Rad55/Rad57
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72269:
Rad55-Rad57-SHU homologous recombination complex. Local refinement on SHU
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-66671:
Local refinement of SARS-CoV-2 KP.3.1.1 RBD with BD57-2704 and AB2-122 Fab
Method: single particle / : Cao YL, Wang YX

EMDB-75687:
Rabbit 60S ribosomal subunit with eEF2 domain IV closed
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

EMDB-75689:
Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

EMDB-75704:
Rabbit 60S ribosomal subunit with eEF2 domain IV open
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

EMDB-75724:
Rabbit 80S with eEF2,eIF5A and SERBP1
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

EMDB-75740:
Rabbit 80S with eEF2,IFRD2 and LARP1,40S-head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

EMDB-75768:
Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorrieff N, Korostelev AA

PDB-11he:
Rabbit 60S ribosomal subunit with eEF2 domain IV closed
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

PDB-11hg:
Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

PDB-11hv:
Rabbit 60S ribosomal subunit with eEF2 domain IV open
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

PDB-11iq:
Rabbit 80S with eEF2,eIF5A and SERBP1
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

PDB-11jj:
Rabbit 80S with eEF2,IFRD2 and LARP1,40S-head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

PDB-11kh:
Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorrieff N, Korostelev AA

EMDB-55167:
The cryo-EM map of the vacant C. auris ribosome LSU
Method: single particle / : Atamas A, Stetsenko A, Incarnato D, Macia Valero A, Rogachev A, Billerbeck S, Guskov A

EMDB-55168:
The cryo-EM map of the vacant C. auris ribosome focused on the body of the SSU
Method: single particle / : Atamas A, Stetsenko A, Incarnato D, Macia Valero A, Rogachev A, Billerbeck S, Guskov A

EMDB-55169:
The cryo-EM map of the vacant C. auris ribosome focused on the head of the SSU
Method: single particle / : Atamas A, Stetsenko A, Incarnato D, Macia Valero A, Rogachev A, Billerbeck S, Guskov A

EMDB-55170:
The cryo-EM map of the structure of C. auris ribosome in complex with Cycloheximide and Geneticin G418 LSU
Method: single particle / : Atamas A, Stetsenko A, Incarnato D, Macia Valero A, Rogachev A, Billerbeck S, Guskov A

EMDB-55172:
The cryo-EM map of the structure of C. auris ribosome in complex with Cycloheximide and Geneticin G418 focused on the body of the SSU
Method: single particle / : Atamas A, Stetsenko A, Incarnato D, Macia Valero A, Rogachev A, Billerbeck S, Guskov A

EMDB-55175:
The cryo-EM map of the structure of C. auris ribosome in complex with Cycloheximide and Geneticin G418 focused on the head of the SSU
Method: single particle / : Atamas A, Stetsenko A, Incarnato D, Macia Valero A, Rogachev A, Billerbeck S, Guskov A

EMDB-55179:
The cryo-EM map of the structure of C. auris ribosome in complex with Blasticidin S LSU
Method: single particle / : Atamas A, Stetsenko A, Incarnato D, Macia Valero A, Rogachev A, Billerbeck S, Guskov A

EMDB-55180:
The cryo-EM map of the structure of C. auris ribosome in complex with Blasticidin S focused on the body of the SSU
Method: single particle / : Atamas A, Stetsenko A, Incarnato D, Macia Valero A, Rogachev A, Billerbeck S, Guskov A

EMDB-55184:
The cryo-EM map of the structure of C. auris ribosome in complex with Blasticidin S focused on the head of the SSU
Method: single particle / : Atamas A, Stetsenko A, Incarnato D, Macia Valero A, Rogachev A, Billerbeck S, Guskov A

EMDB-69297:
Cryo-EM structure of the UnCas12m4a-crRNA-tgDNA ternary complex in the TS-cleaving state
Method: single particle / : Morinaga H, Omura SN, Nureki O

EMDB-69298:
Cryo-EM structure of the UnCas12m4a-crRNA-tgDNA ternary complex in the NTS-cleaving state
Method: single particle / : Morinaga H, Omura SN, Nureki O

EMDB-69299:
Cryo-EM structure of the TfCas12m3-crRNA-tgDNA ternary complex
Method: single particle / : Morinaga H, Omura SN, Nureki O

EMDB-55092:
CryoEM structure of the vacant Candida auris 80S ribosome
Method: single particle / : Atamas A, Stetsenko A, Incarnato D, Macia Valero A, Rogachev A, Billerbeck S, Guskov A

EMDB-55225:
CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
Method: single particle / : Atamas A, Stetsenko A, Incarnato D, Macia Valero A, Rogachev A, Billerbeck S, Guskov A

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more