[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 188 items for (author: kim & kh)

EMDB-36488:
Structure of Duffy Antigen Receptor for Chemokines (DARC)/ACKR1 in complex with the chemokine, CCL7 (Composite map)

EMDB-37212:
Structure of Duffy Antigen Receptor for Chemokines (DARC)/ACKR1 in complex with the chemokine, CCL7 (Receptor original map)

EMDB-37214:
Structure of Duffy Antigen Receptor for Chemokines (DARC)/ACKR1 in complex with the chemokine, CCL7 (Ligand/CCL7 focused map)

PDB-8jps:
Structure of Duffy Antigen Receptor for Chemokines (DARC)/ACKR1 in complex with the chemokine, CCL7 (Composite map)

EMDB-43762:
Aca2 from Pectobacterium phage ZF40 bound to RNA

PDB-8w35:
Aca2 from Pectobacterium phage ZF40 bound to RNA

EMDB-42676:
5-HT2AR bound to Lisuride in complex with a mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy (cryoEM)

EMDB-42999:
5HT2AR-miniGq heterotrimer in complex with a novel agonist obtained from large scale docking

PDB-8uwl:
5-HT2AR bound to Lisuride in complex with a mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy (cryoEM)

PDB-8v6u:
5HT2AR-miniGq heterotrimer in complex with a novel agonist obtained from large scale docking

EMDB-40825:
10E8-GT10.2 immunogen in complex with human Fab 10E8 and mouse Fab W6-10

EMDB-43049:
Cryo-electron tomogram of mitochondria from cryo-FIB milled l-Opa1* mouse embryonic fibroblasts

EMDB-43050:
cryo-electron tomogram of mitochondria in cryo-FIB milled l-Opa1* mouse embryonic fibroblasts

EMDB-43051:
cryo-electron tomogram of mitochondria in cryo-FIB milled l-Opa1* mouse embryonic fibroblasts

EMDB-43052:
cryo-electron tomogram of mitochondria in cryo-FIB milled l-Opa1* mouse embryonic fibroblasts

EMDB-43053:
Cryo-electron tomogram of mitochondria in cryo-FIB milled s-Opa1* mouse embryonic fibroblasts

EMDB-43054:
cryo-electron tomogram of mitochondria in cryo-FIB milled s-Opa1* mouse embryonic fibroblasts

EMDB-43055:
cryo-electron tomogram of mitochondria in cryo-FIB milled s-Opa1* mouse embryonic fibroblasts

EMDB-43056:
cryo-electron tomogram of mitochondria in cryo-FIB milled s-Opa1* mouse embryonic fibroblasts

EMDB-43057:
Cryo-electron tomogram of mitochondria in cryo-FIB milled s-Opa1* mouse embryonic fibroblasts

EMDB-43058:
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts with OPA1 deletion

EMDB-43059:
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts with OPA1 deletion

EMDB-43060:
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts with OPA1 deletion

EMDB-43061:
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts with OPA1 deletion

EMDB-43062:
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts with OPA1 deletion

EMDB-43063:
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts

EMDB-43064:
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts

EMDB-43065:
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts

EMDB-43066:
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts

EMDB-43067:
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts with overexpression of OPA1

EMDB-43068:
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts with overexpression of OPA1

EMDB-43069:
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts with overexpression of OPA1

EMDB-43070:
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts with overexpression of OPA1

EMDB-41008:
Cryo-EM structure of the DHA bound FFA4-Gq complex

EMDB-41010:
Cryo-EM structure of the Butyrate bound FFA2-Gq complex

EMDB-41013:
Cryo-EM structure of the DHA bound FFA1-Gq complex

PDB-8t3q:
Cryo-EM structure of the DHA bound FFA4-Gq complex

PDB-8t3s:
Cryo-EM structure of the Butyrate bound FFA2-Gq complex

PDB-8t3v:
Cryo-EM structure of the DHA bound FFA1-Gq complex

EMDB-41007:
Cryo-EM structure of the TUG-891 bound FFA4-Gq complex

EMDB-41014:
Cryo-EM structure of the DHA bound FFA1-Gq complex(mask on receptor)

PDB-8t3o:
Cryo-EM structure of the TUG-891 bound FFA4-Gq complex

EMDB-28156:
Cryo-EM structure of human DNMT3B homo-tetramer (form I)

EMDB-28157:
Cryo-EM structure of human DNMT3B homo-tetramer (form II)

EMDB-28158:
Cryo-EM structure of human DNMT3B homo-trimer

EMDB-28159:
Cryo-EM structure of human DNMT3B homo-hexamer

PDB-8eih:
Cryo-EM structure of human DNMT3B homo-tetramer (form I)

PDB-8eii:
Cryo-EM structure of human DNMT3B homo-tetramer (form II)

PDB-8eij:
Cryo-EM structure of human DNMT3B homo-trimer

PDB-8eik:
Cryo-EM structure of human DNMT3B homo-hexamer

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlc1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more