[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 95 items for (author: kim & jm)

EMDB-40711:
CryoEM structure of Western equine encephalitis virus VLP in complex with the chimeric Du-D1-Mo-D2 MXRA8 receptor

EMDB-27272:
CryoEM structure of Western equine encephalitis virus VLP

EMDB-27271:
CryoEM structure of Western equine encephalitis virus VLP in complex with the avian MXRA8 receptor

EMDB-28644:
CryoEM structure of Western equine encephalitis virus VLP in complex with the avian MXRA8 receptor

EMDB-41144:
Cryo-EM Structure of GPR61-G protein complex stabilized by scFv16

EMDB-41145:
Cryo-EM Structure of GPR61-

EMDB-34530:
Membrane protein A

EMDB-34531:
Membrane protein B

EMDB-35713:
Cryo-EM structure of the potassium-selective channelrhodopsin HcKCR1 H225F mutant in lipid nanodisc

EMDB-40181:
Human TRPV3 tetramer structure, closed conformation

EMDB-40183:
Human TRPV3 pentamer structure

EMDB-17539:
Cryo-EM structure of dimeric UBR5

EMDB-17540:
Cryo-EM structure of full-length human UBR5 (homotetramer)

EMDB-17542:
Negative stain map of UBR5 (dimer) in complex with RARA/RXRA

EMDB-28523:
Structure of interleukin receptor common gamma chain (IL2Rgamma) in complex with two antibodies

EMDB-27208:
anti-HIV-1 gp120-sCD4 complex antibody CG10 Fab in complex with B41-sCD4

EMDB-27209:
Trimeric HIV-1 Env BG505 SOSIP.664 in complex with sCD4 and antibody 1393A

EMDB-27210:
HIV-1 Env trimer BG505 SOSIP.664 trimer in complex with sCD4 and 1361 Fab

EMDB-27211:
HIV-1 Env trimer BG505 SOSIP in complex with sCD4 and 697D Fab

EMDB-27212:
HIV-1 Env trimer BG505 SOSIP in complex with sCD4 and antibody 830A

EMDB-24378:
5-HT2AR bound to a novel agonist in complex with a mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy (cryoEM)

EMDB-32377:
2.02 angstrom cryo-EM structure of the pump-like channelrhodopsin ChRmine

EMDB-32378:
2.12 angstrom cryo-EM map of the pump-like channelrhodopsin ChRmine with Fab antibody fragment

EMDB-12465:
SARS-CoV-2 Spike RBD (dimer) in complex with two Fu2 nanobodies

EMDB-12561:
SARS-CoV-2 Spike (dimers) in complex with six Fu2 nanobodies

EMDB-23544:
Human phosphofructokinase-1 liver type bound to activator NA-11

EMDB-13095:
CryoEM structure of the ABC transporter BmrA E504A mutant in complex with ATP-Mg

EMDB-12170:
Multidrug resistance transporter BmrA mutant E504A bound with ATP, Mg, and Rhodamine 6G solved by Cryo-EM

EMDB-25448:
Negative-stain EM reconstruction of SpFN_1B-06-PL, a SARS-CoV-2 spike fused to H.pylori ferritin nanoparticle vaccine candidate

EMDB-25449:
RFN_131, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Receptor-Binding Domain

EMDB-25450:
pCoV146, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Spike Receptor-Binding and N-Terminal Domains

EMDB-25451:
pCoV111, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Spike S1 Subunit

EMDB-24346:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-80 IgG

EMDB-24348:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-081 Fab

EMDB-24349:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-091 IgG

EMDB-24350:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-094 VHH-Fc

EMDB-24351:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-096 IgG

EMDB-24358:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-147 IgG

EMDB-24359:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-246 IgG

EMDB-24335:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-259 IgG

EMDB-24336:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-186 IgG

EMDB-24337:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-199 IgG

EMDB-24338:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-249 IgG

EMDB-24339:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-252 IgG

EMDB-24340:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-049 IgG

EMDB-24341:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-073 scFv

EMDB-24342:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-043 IgG

EMDB-24343:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-010 IgG

EMDB-24344:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-148 IgG

EMDB-24345:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-002 Fab

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more