[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 254 items for (author: julius & d)

EMDB-71394:
Avian TRPM8 (Parus major) desensitized, fully-swapped, ligand-free structure resolved in cell vesicles using cryo-EM
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-71455:
Avian TRPM8 (Parus major) menthol bound structure resolved in cell vesicles using cryo-EM
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-74123:
Avian TRPM8 (Parus major) semi-swapped, calcium free, menthol bound structure resolved in cell vesicles
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-74125:
Parus major TRPM8, fully-swapped state determined in the presence of menthol
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-74126:
Avian TRPM8 (Parus major) "undetermined" class 1 resolved in cell vesicles using cryo-EM
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-74127:
Avian TRPM8 (Parus major) "undetermined" class 2 resolved in cell vesicles using cryo-EM
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-74128:
Human TRPM8 V915Y semi-swapped structure, cold in the presence of calcium, determined using GDN
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-74129:
Human TRPM8 (wild-type) semi-swapped structure, calcium-free, 4 degress Celsius, determined using cell vesicles
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

PDB-9p90:
Avian TRPM8 (Parus major) desensitized, fully-swapped, ligand-free structure resolved in cell vesicles using cryo-EM
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

PDB-9pb6:
Avian TRPM8 (Parus major) menthol bound structure resolved in cell vesicles using cryo-EM
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

PDB-9zez:
Avian TRPM8 (Parus major) semi-swapped, calcium free, menthol bound structure resolved in cell vesicles
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-71352:
Avian TRPM8 (Parus major) closed, ligand-free structure resolved in cell vesicles using cryo-EM
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-71391:
Human TRPM8 closed, ligand-free structure resolved in GDN using cryo-EM
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-71395:
Avian TRPM8 (Parus major) semi-swapped, ligand-free structure resolved in cell vesicles using cryo-EM
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-71444:
Avian TRPM8 (Parus major) semi-swapped, ligand-free structure at high pH and 4 degrees Celsius resolved in GDN using cryo-EM
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-71454:
Human TRPM8 menthol bound structure at 4 degrees Celsius resolved in cell vesicles using cryo-EM
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-74036:
Avian TRPM8 (Parus major) fully-swapped, closed, ligand-free in the presence of calcium, structure resolved in cell vesicles
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-74037:
Avian TRPM8 (Parus major) semi-swapped, closed, ligand-free in the presence of calcium, structure resolved in cell vesicles
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-74038:
Avian TRPM8 (Parus major) fully swapped closed, calcium free, in the presence of menthol, resolved in cell vesicles
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-74039:
Avian TRPM8 (Parus major) semi-swapped, closed, calcium free, menthol bound structure resolved in cell vesicles
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-74040:
Parus major TRPM8 with a chimeric human outer pore loops, semi-swapped, ligand-free, cold, structure resolved in GDN
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-74041:
Human TRPM8 V915Y fully-swapped, closed, ligand-free structure resolved in GDN
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-74042:
Human TRPM8 fully-swapped, desensitized, ligand-free structure at 4 degrees Celsius resolved in cell vesicles
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-74124:
Human TRPM8 fully-swapped, ligand-free structure in the absence of calcium at 4 degrees Celsius resolved in cell vesicles
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

PDB-9p7s:
Avian TRPM8 (Parus major) closed, ligand-free structure resolved in cell vesicles using cryo-EM
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

PDB-9p8y:
Human TRPM8 closed, ligand-free structure resolved in GDN using cryo-EM
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

PDB-9p91:
Avian TRPM8 (Parus major) semi-swapped, ligand-free structure resolved in cell vesicles using cryo-EM
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

PDB-9par:
Avian TRPM8 (Parus major) semi-swapped, ligand-free structure at high pH and 4 degrees Celsius resolved in GDN using cryo-EM
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

PDB-9pb5:
Human TRPM8 menthol bound structure at 4 degrees Celsius resolved in cell vesicles using cryo-EM
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

PDB-9zcn:
Avian TRPM8 (Parus major) fully-swapped, closed, ligand-free in the presence of calcium, structure resolved in cell vesicles
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

PDB-9zco:
Avian TRPM8 (Parus major) semi-swapped, closed, ligand-free in the presence of calcium, structure resolved in cell vesicles
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

PDB-9zcp:
Avian TRPM8 (Parus major) fully swapped closed, calcium free, in the presence of menthol, resolved in cell vesicles
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

PDB-9zcq:
Avian TRPM8 (Parus major) semi-swapped, closed, calcium free, menthol bound structure resolved in cell vesicles
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

PDB-9zcr:
Parus major TRPM8 with a chimeric human outer pore loops, semi-swapped, ligand-free, cold, structure resolved in GDN
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

PDB-9zcu:
Human TRPM8 V915Y fully-swapped, closed, ligand-free structure resolved in GDN
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

PDB-9zcv:
Human TRPM8 fully-swapped, desensitized, ligand-free structure at 4 degrees Celsius resolved in cell vesicles
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

PDB-9zf0:
Human TRPM8 fully-swapped, ligand-free structure in the absence of calcium at 4 degrees Celsius resolved in cell vesicles
Method: single particle / : Choi KY, Lin X, Cheng Y, Julius D

EMDB-56096:
SP100 CARD filament
Method: helical / : Rabl J, Aird E, Corn J

PDB-9tnz:
SP100 CARD filament
Method: helical / : Rabl J, Aird E, Corn J

EMDB-18977:
Cryo-EM structure of the human TREX-2 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-18978:
Cryo-EM structure of the human UAP56 - TREX-2 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-18979:
Cryo-EM structure of the human TREX complex
Method: single particle / : Hohmann U, Pacheco-Fiallos B, Plaschka C

EMDB-18981:
Structure of the human UAP56 RecA1 RecA2 - TREX-2 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

PDB-8r7j:
Cryo-EM structure of the human TREX-2 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

PDB-8r7k:
Cryo-EM structure of the human UAP56 - TREX-2 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

PDB-8r7l:
Cryo-EM structure of the human TREX complex
Method: single particle / : Hohmann U, Pacheco-Fiallos B, Plaschka C

EMDB-19643:
Tomographic reconstruction of the follicle cell nuclear periphery from high pressure frozen, freeze substituted and resin embedded D. melanogaster egg chamber
Method: electron tomography / : Klumpe S, Hampoelz B, Ronchi P, Beck M, Plitzko J

EMDB-19644:
Tomographic reconstruction of the follicle cell nuclear periphery from high pressure frozen, freeze substituted and resin embedded D. melanogaster egg chamber
Method: electron tomography / : Klumpe S, Hampoelz B, Ronchi P, Beck M, Plitzko J

EMDB-19645:
Tomographic reconstruction of the follicle cell nuclear periphery from high pressure frozen, freeze substituted and resin embedded D. melanogaster egg chamber
Method: electron tomography / : Klumpe S, Hampoelz B, Ronchi P, Beck M, Plitzko J

EMDB-19646:
Tomographic reconstruction of the follicle cell nuclear periphery from high pressure frozen, freeze substituted and resin embedded D. melanogaster egg chamber
Method: electron tomography / : Klumpe S, Hampoelz B, Ronchi P, Beck M, Plitzko J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more