[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 63 items for (author: huang & jw)

EMDB-66046:
ALECT2 type Ia filament from renal biopsy tissue of an individual with ALECT2 amyloidosis
Method: helical / : Zheng J, Zheng Y, Shi Y

EMDB-66047:
ALECT2 type Ib filament from renal biopsy tissue of an individual with ALECT2 amyloidosis
Method: helical / : Zheng J, Zheng Y, Shi Y

EMDB-66048:
ALECT2 type IIa filament from renal biopsy tissue of an individual with ALECT2 amyloidosis
Method: helical / : Zheng J, Zheng Y, Shi Y

EMDB-66049:
ALECT2 type IIb filament from renal biopsy tissue of an individual with ALECT2 amyloidosis
Method: helical / : Zheng J, Zheng Y, Shi Y

EMDB-66050:
ALECT2 type III filament from renal biopsy tissue of an individual with ALECT2 amyloidosis
Method: helical / : Zheng J, Zheng Y, Shi Y

EMDB-62782:
Cryo-electron microscopic structure of a novel amidohydrolase ADH3 triple mutation
Method: single particle / : Dai LH, He BY, Hu YM, Xu YH, Huang JP, Xie ZZ, Li H, Niu D, Guo RT, Chen CC

EMDB-62778:
Cryo-EM structure and rational engineering of a novel efficient ochratoxin A-detoxifying amidohydrolase
Method: single particle / : Dai LH, Xu YH, Hu YM, He BY, Huang JP, Xie ZZ, Li H, Niu D, Guo RT, Chen CC

EMDB-62780:
Cryo-electron microscopic structure of a novel amidohydrolase with three mutations
Method: single particle / : Dai LH, Xu YH, Hu YM, He BY, Huang JP, Xie ZZ, Li H, Niu D, Guo RT, Chen CC

EMDB-62861:
Cryo-electron microscopic structure of a highly efficient ochratoxin detoxification enzyme LlADH
Method: single particle / : Dai LH, Xu YH, Hu YM, Niu D, He BY, Huang JP, Xie ZZ, Li H, Guo RT, Chen CC

EMDB-73949:
Q23.MD39 in Complex with Fabs from antibodies CH01 and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-73950:
CryoEM map of CK52.1 in complex with Q23.V033GT
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-73961:
CK52.1 Fab in complex with Q23.RH-GT. Env
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-46884:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-46914:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-64215:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of ATP
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64216:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Ap4A
Method: single particle / : Duan W, Serganov A

EMDB-64218:
CryoEM structure of the T.thermophilus transcription initiation complex bound to ATP-C, -1 dC in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64219:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Up4A
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64250:
CryoEM structure of the T.thermophilus transcription initiation complex
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64251:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Ap4A-C, -1 dA in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64252:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Ap4A-C, -1 dC in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64253:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Gp4A, -1 dA in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64254:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Gp4A-C-U and CTP, -1 dC in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64255:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Gp4A-C, -1 dC in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64266:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Up4A-C and Up4A, -1 dA in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64267:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Up4A-C and UTP, -1 dA in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64271:
CryoEM structure of T.thermophilus transcription initiation complex bound to Gp4A-C, -1 dA in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64404:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Gp4A, -1 dC in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-72160:
Cryo-EM structure of ternary complex Ikaros-ZF2:CC-885:CRBN:DDB1 (molecular glue degrader)
Method: single particle / : Zhu J, Pagarigan BE, Tran ET

EMDB-62471:
Cryo-EM structure of PsCas9-sgRNA binary complex
Method: single particle / : Shen PP, Lu XY, Huang JW, Chen CC, Gut RT

EMDB-62479:
Cryo-EM structure of PsCas9-sgRNA-dsDNA ternary complex
Method: single particle / : Shen PP, Lu XY, Huang JW, Chen CC, Guo RT

EMDB-63976:
Cryo-EM structure of PsCas9-sgRNA-dsDNA (30 nt) ternary complex
Method: single particle / : Shen PP, Lu XY, Huang JW, Chen CC, Guo RT

EMDB-48423:
Angavokely virus (AngV) fusion (F) protein ectodomain in pre-fusion conformation
Method: single particle / : Lella M, Acharya P

EMDB-48535:
AngV-F Pre-fusion Protein
Method: single particle / : Lella M, Acharya P

EMDB-61387:
Structure of chanoclavine synthase from Claviceps fusiformis
Method: single particle / : Liu ZW, Wang T, Li X, Shen PP, Huang JW, Chen CC, Guo RT

EMDB-61388:
Structure of chanoclavine synthase from Claviceps fusiformis in complex with prechanoclavine
Method: single particle / : Liu ZW, Wang T, Li X, Shen PP, Huang JW, Chen CC, Guo RT

EMDB-36646:
Cryo-EM structure of GeoCas9-sgRNA-dsDNA ternary complex
Method: single particle / : Shen PP, Liu BB, Li X, Zhang LL, Chen CC, Guo RT

EMDB-36650:
Cryo-EM structure of GeoCas9-sgRNA binary complex
Method: single particle / : Shen PP, Liu BB, Li X, Zhang LL, Chen CC, Guo RT

EMDB-35775:
The rice Na+/H+ antiporter SOS1 in an auto-inhibited state
Method: single particle / : Zhang XY, Tang LH, Zhang CR, Nie JW, Chen YH

EMDB-35950:
The truncated rice Na+/H+ antiporter SOS1 (1-976) in a constitutively active state
Method: single particle / : Zhang XY, Tang LH, Zhang CR, Nie JW, Chen YH

EMDB-35452:
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3
Method: single particle / : Dai LH, Niu D, Huang JW, Li X, Shen PP, Li H, Hu YM, Yang Y, Chen CC, Guo RT

EMDB-35453:
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3 in complex with Phe
Method: single particle / : Dai LH, Niu D, Huang JW, Li X, Shen PP, Li H, Hu YM, Yang Y, Chen CC, Guo RT

EMDB-35454:
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3 in complex with ochratoxin A
Method: single particle / : Dai LH, Niu D, Huang JW, Li X, Shen PP, Li H, Hu YM, Yang Y, Chen CC, Guo RT

EMDB-36060:
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3 mutant S88E in complex with ochratoxin A
Method: single particle / : Dai LH, Niu D, Huang JW, Li X, Shen PP, Li H, Hu YM, Yang Y, Chen CC, Guo RT

EMDB-35086:
A cryo-EM structure of KTF1-bound polymerase V transcription elongation complex
Method: single particle / : Zhang H, Zhang Y

EMDB-32497:
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (focused refinement on Fab-RBD)
Method: single particle / : Zeng JW

EMDB-32498:
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (3U)
Method: single particle / : Zeng JW, Ge JW

EMDB-32499:
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d)
Method: single particle / : Zeng JW, Wang XW

EMDB-32854:
SARS-CoV-2 Omicron S-open
Method: single particle / : Li JW, Cong Y

EMDB-32855:
SARS-CoV-2 Omicron S-open-2
Method: single particle / : Li JW, Cong Y

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more