[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 116 items for (author: fischer & es)

EMDB-46922:
WEE1 bound to CRBN-DDB1 via compound 10 (CRBN closed conformation)
Method: single particle / : Baek K, Fischer ES

EMDB-46923:
WEE1 bound to CRBN-DDB1 via compound 10 (CRBN open conformation)
Method: single particle / : Baek K, Fischer ES

EMDB-41426:
Cryo-EM structure of TRNM-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Method: single particle / : Roark RS, Morano NC, Shapiro LS, Kwong PD

EMDB-41438:
Cryo-EM structure of HERH-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Method: single particle / : Roark RS, Hoyt F, Hansen B, Fischer E, Shapiro LS, Kwong PD

EMDB-41440:
Cryo-EM structure of TRNM-f*01 Fab in complex with HIV-1 Env trimer ConC SOSIP
Method: single particle / : Roark RS, Morano NC, Shapiro LS, Kwong PD

PDB-8tnu:
Cryo-EM structure of TRNM-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Method: single particle / : Roark RS, Morano NC, Shapiro LS, Kwong PD

PDB-8to7:
Cryo-EM structure of HERH-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Method: single particle / : Roark RS, Hoyt F, Hansen B, Fischer E, Shapiro LS, Kwong PD

PDB-8to9:
Cryo-EM structure of TRNM-f*01 Fab in complex with HIV-1 Env trimer ConC SOSIP
Method: single particle / : Roark RS, Morano NC, Shapiro LS, Kwong PD

EMDB-44389:
Cryo-EM structure of the ZBTB5 BTB domain filament
Method: single particle / : Park J, Hunkeler M, Fischer ES

EMDB-44391:
Cryo-EM structure of the ZBTB9 BTB domain filament
Method: helical / : Park J, Hunkeler M, Fischer ES

EMDB-18134:
Cryo-EM structure of the DNA polymerase holoenzyme E9-A20-D4 of vaccinia virus
Method: single particle / : Burmeister WP, Ballandras-Colas A, Boettcher B, Grimm C

PDB-8q3r:
Cryo-EM structure of the DNA polymerase holoenzyme E9-A20-D4 of vaccinia virus
Method: single particle / : Burmeister WP, Ballandras-Colas A, Boettcher B, Grimm C

EMDB-41363:
Cryo-EM structure of DDB1deltaB-DDA1-DCAF5
Method: single particle / : Yue H, Hunkeler M, Roy Burman SS, Fischer ES

PDB-8tl6:
Cryo-EM structure of DDB1deltaB-DDA1-DCAF5
Method: single particle / : Yue H, Hunkeler M, Roy Burman SS, Fischer ES

EMDB-41423:
Cryo-EM structure of DDB1dB:CRBN:Pomalidomide:SD40
Method: single particle / : Roy Burman SS, Hunkeler M, Fischer ES

EMDB-41424:
Cryo-EM structure of DDB1dB:CRBN:PT-179:SD40, conformation 1
Method: single particle / : Roy Burman SS, Hunkeler M, Fischer ES

EMDB-41425:
Cryo-EM structure of DDB1dB:CRBN:PT-179:SD40, conformation 2
Method: single particle / : Roy Burman SS, Hunkeler M, Fischer ES

EMDB-41777:
Map from local refinement (focused on CRBN) of DDB1dB:CRBN:Pomalidomide:SD40
Method: single particle / : Roy Burman SS, Hunkeler M, Fischer ES

EMDB-41778:
Map from local refinement (focused on CRBN) of DDB1dB:CRBN:PT-179:SD40, conformation 1
Method: single particle / : Roy Burman SS, Hunkeler M, Fischer ES

EMDB-41779:
Map from local refinement (focused on CRBN) of DDB1dB:CRBN:PT-179:SD40, conformation 2
Method: single particle / : Roy Burman SS, Hunkeler M, Fischer ES

EMDB-18941:
SARS-CoV-2 S (Spike) protein (BA.1) in complex with VHH Ma16B06 (sub-volume of two adjacent RBD-VHH modules)
Method: single particle / : Guttler T, Aksu M, Gorlich D

EMDB-18657:
PROTAC-mediated complex of KRAS with VHL/Elongin-B/Elongin-C/Cullin-2/Rbx1
Method: single particle / : Fischer G, Peter D, Arce-Solano S

PDB-8qu8:
PROTAC-mediated complex of KRAS with VHL/Elongin-B/Elongin-C/Cullin-2/Rbx1
Method: single particle / : Fischer G, Peter D, Arce-Solano S

EMDB-17539:
Cryo-EM structure of dimeric UBR5
Method: single particle / : Aguirre JD, Kater L, Kempf G, Cavadini S, Thoma NH

EMDB-17540:
Cryo-EM structure of full-length human UBR5 (homotetramer)
Method: single particle / : Aguirre JD, Kater L, Kempf G, Cavadini S, Thoma NH

PDB-8p82:
Cryo-EM structure of dimeric UBR5
Method: single particle / : Aguirre JD, Kater L, Kempf G, Cavadini S, Thoma NH

PDB-8p83:
Cryo-EM structure of full-length human UBR5 (homotetramer)
Method: single particle / : Aguirre JD, Kater L, Kempf G, Cavadini S, Thoma NH

EMDB-17542:
Negative stain map of UBR5 (dimer) in complex with RARA/RXRA
Method: single particle / : Aguirre JD, Cavadini S, Kempf G, Kater L, Thoma NH

EMDB-16035:
Tau Paired Helical Filament from Extracellular Vesicles from Alzheimer's disease brain (Individual 1)
Method: helical / : Behr TS, Ryskeldi-Falcon B

EMDB-16039:
Tau Paired Helical Filament from Cellular Fraction of Alzheimer's disease brain
Method: helical / : Behr TS, Ryskeldi-Falcon B

EMDB-16064:
Cryo-electron tomogram of an extracellular vesicle containing tau filaments isolated from Alzheimer's Disease patient brain
Method: electron tomography / : Behr TS, Ryskeldi-Falcon B

PDB-8bgs:
Tau Paired Helical Filament from Extracellular Vesicles from Alzheimer's disease brain
Method: helical / : Behr TS, Ryskeldi-Falcon B

PDB-8bgv:
Tau Paired Helical Filament from Cellular Fraction of Alzheimer's disease brain
Method: helical / : Behr TS, Ryskeldi-Falcon B

EMDB-29714:
Cryo-EM structure of DDB1deltaB-DDA1-DCAF16-BRD4(BD2)-MMH2
Method: single particle / : Ma MW, Hunkeler M, Jin CY, Fischer ES

PDB-8g46:
Cryo-EM structure of DDB1deltaB-DDA1-DCAF16-BRD4(BD2)-MMH2
Method: single particle / : Ma MW, Hunkeler M, Jin CY, Fischer ES

EMDB-27839:
Cryo-EM density of BIRC6/casp-3 (clusters)
Method: single particle / : Hunkeler M, Fischer ES

EMDB-27840:
Cryo-EM density of BIRC6/casp-7 (clusters)
Method: single particle / : Hunkeler M, Fischer ES

EMDB-27832:
Cryo-EM structure of BIRC6 (consensus)
Method: single particle / : Hunkeler M, Fischer ES

EMDB-27833:
Cryo-EM structure of helical arch of BIRC6 (from local refinement 1)
Method: single particle / : Hunkeler M, Fischer ES

EMDB-27834:
Cryo-EM structure of N-terminal arm of BIRC6 (from local refinement 2)
Method: single particle / : Hunkeler M, Fischer ES

EMDB-27835:
Cryo-EM structure of N-terminal arm (aa68-966) of BIRC6 (from local refinement 3)
Method: single particle / : Hunkeler M, Fischer ES

EMDB-27836:
Cryo-EM structure of C-terminal arm of BIRC6 (from local refinement 4)
Method: single particle / : Hunkeler M, Fischer ES

EMDB-27837:
Cryo-EM structure of BIRC6/Smac
Method: single particle / : Hunkeler M, Fischer ES

EMDB-27838:
Cryo-EM structure of BIRC6/Smac (from local refinement 1)
Method: single particle / : Hunkeler M, Fischer ES

EMDB-27841:
Cryo-EM structure of BIRC6/HtrA2-S306A
Method: single particle / : Hunkeler M, Fischer ES

EMDB-26990:
Cryo-EM structure of human METTL1-WDR4-tRNA(Phe) complex
Method: single particle / : Li J, Wang L, Fontana P, Hunkeler M, Roy-Burman SS, Wu H, Fishcer ES, Gregory RI

EMDB-26991:
Cryo-EM structure of human METTL1-WDR4-tRNA(Val) complex
Method: single particle / : Li J, Wang L, Fontana P, Hunkeler M, Roy-Burman SS, Wu H, Fischer ES, Gregory RI

PDB-8cth:
Cryo-EM structure of human METTL1-WDR4-tRNA(Phe) complex
Method: single particle / : Li J, Wang L, Fontana P, Hunkeler M, Roy-Burman SS, Wu H, Fishcer ES, Gregory RI

PDB-8cti:
Cryo-EM structure of human METTL1-WDR4-tRNA(Val) complex
Method: single particle / : Li J, Wang L, Fontana P, Hunkeler M, Roy-Burman SS, Wu H, Fischer ES, Gregory RI

EMDB-13460:
Structure of the 70S ribosome with tRNAs in hybrid state 2 (H2)
Method: single particle / : Petrychenko V, Peng BZ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more