[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 38 items for (author: fenn & k)

EMDB-41144:
Cryo-EM Structure of GPR61-G protein complex stabilized by scFv16
Method: single particle / : Lees JA, Dias JM, Han S

EMDB-41145:
Cryo-EM Structure of GPR61-
Method: single particle / : Lees JA, Dias JM, Han S

PDB-8tb0:
Cryo-EM Structure of GPR61-G protein complex stabilized by scFv16
Method: single particle / : Lees JA, Dias JM, Han S

PDB-8tb7:
Cryo-EM Structure of GPR61-
Method: single particle / : Lees JA, Dias JM, Han S

EMDB-16268:
E. coli BAM complex (BamABCDE) bound to darobactin B
Method: single particle / : Horne JE, Fenn KL, Radford SE, Ranson NA

EMDB-16282:
E. coli BAM complex (BamABCDE) wild-type
Method: single particle / : Machin JM, Radford SE, Ranson NA

PDB-8bvq:
E. coli BAM complex (BamABCDE) bound to darobactin B
Method: single particle / : Horne JE, Fenn KL, Radford SE, Ranson NA

PDB-8bwc:
E. coli BAM complex (BamABCDE) wild-type
Method: single particle / : Machin JM, Radford SE, Ranson NA

EMDB-27898:
Cryo-EM structure of human glycerol-3-phosphate acyltransferase 1 (GPAT1) in complex with 2-oxohexadecyl-CoA
Method: single particle / : Johnson ZL, Wasilko DJ, Ammirati M, Chang JS, Han S, Wu H

EMDB-27899:
Cryo-EM structure of human glycerol-3-phosphate acyltransferase 1 (GPAT1) in complex with CoA and palmitoyl-LPA
Method: single particle / : Wasilko DJ, Johnson ZL, Ammirati M, Chang JS, Han S, Wu H

PDB-8e4y:
Cryo-EM structure of human glycerol-3-phosphate acyltransferase 1 (GPAT1) in complex with 2-oxohexadecyl-CoA
Method: single particle / : Johnson ZL, Wasilko DJ, Ammirati M, Chang JS, Han S, Wu H

PDB-8e50:
Cryo-EM structure of human glycerol-3-phosphate acyltransferase 1 (GPAT1) in complex with CoA and palmitoyl-LPA
Method: single particle / : Wasilko DJ, Johnson ZL, Ammirati M, Chang JS, Han S, Wu H

EMDB-14170:
Low resolution negative stain map of SslE
Method: single particle / : Fenn K, Darbari VC, Garnett JA, Corsini PM

EMDB-12007:
Programmable icosahedral shell system for virus trapping: DNA-origami half octahedron
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12008:
Programmable icosahedral shell system for virus trapping: DNA-origami T=9 triangle (pentamer)
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12009:
Programmable icosahedral shell system for virus trapping: DNA-origami octahedron triangle
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12010:
Programmable icosahedral shell system for virus trapping: DNA-origami T=1 triangle
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12011:
Programmable icosahedral shell system for virus trapping: DNA-origami T=3 triangle
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12012:
Programmable icosahedral shell system for virus trapping: DNA-origami T=4 triangle (isosceles)
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12013:
Programmable icosahedral shell system for virus trapping: DNA-origami T=4 triangle (equilateral)
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12014:
Programmable icosahedral shell system for virus trapping: DNA-origami T=9 triangle (hexamer 1)
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12015:
Programmable icosahedral shell system for virus trapping: DNA-origami T=9 triangle (hexamer 2)
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12016:
Programmable icosahedral shell system for virus trapping: DNA-origami octahedron shell
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12019:
Programmable icosahedral shell system for virus trapping: DNA-origami T=3 shell
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12020:
Programmable icosahedral shell system for virus trapping: DNA-origami T=4 shell
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12021:
Programmable icosahedral shell system for virus trapping: DNA-origami T=1 shell
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12022:
Programmable icosahedral shell system for virus trapping: T=1 shell trapping a HBV core particle
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12023:
Programmable icosahedral shell system for virus trapping: DNA-origami T=1 shell with pentagonal aperture
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12024:
Programmable icosahedral shell system for virus trapping: DNA-origami T=1 shell (at 25mM MgCl2)
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12044:
Programmable icosahedral shell system for virus trapping: DNA-origami half octahedron shell trapping a Hepatitis B core particle
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12045:
Programmable icosahedral shell system for virus trapping: DNA-origami half T=1 shell
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12046:
Programmable icosahedral shell system for virus trapping: DNA-origami triangular brick
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12049:
Programmable icosahedral shell system for virus trapping: spiky DNA-origami T=1 shell
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-20857:
CryoEM structure of human alpha4beta2 nicotinic acetylcholine receptor in complex with varenicline
Method: single particle / : Alvarez FJD, Mukherjee S, Han S, Ammirati M, Kossiakoff AA

EMDB-20863:
CryoEM structure of human alpha4beta2 nicotinic acetylcholine receptor with varenicline in complex with anti-BRIL synthetic antibody BAK5
Method: single particle / : Alvarez FJD, Mukherjee S, Han S, Ammirati M, Kossiakoff AA

PDB-6ur8:
CryoEM structure of human alpha4beta2 nicotinic acetylcholine receptor in complex with varenicline
Method: single particle / : Alvarez FJD, Mukherjee S, Han S, Ammirati M, Kossiakoff AA

PDB-6usf:
CryoEM structure of human alpha4beta2 nicotinic acetylcholine receptor with varenicline in complex with anti-BRIL synthetic antibody BAK5
Method: single particle / : Alvarez FJD, Mukherjee S, Han S, Ammirati M, Kossiakoff AA

EMDB-1219:
Crystal structure of a soluble CD28-Fab complex.
Method: single particle / : Evans EJ, Esnouf RM, Manso-Sancho R, Gilbert RJC, James JR, Yu C, Fennely JA, Vowles C, Hanke T, Walse B, Hunig T, Sorensen P, Stuart DI, Davis SJ

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more