[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 5,871 items for (author: cheng & c)

EMDB-70289:
S.c INO80 in complex with Yeast 0/80 nucleosome, Apo State
Method: single particle / : Wu H, Kaur U, Narlikar GJ, Cheng YF

PDB-9ob1:
S.c INO80 in complex with Yeast 0/80 nucleosome, Apo State
Method: single particle / : Wu H, Kaur U, Narlikar GJ, Cheng YF

EMDB-63451:
Nonamer Msp1 from S.cerevisiae (with a catalytic dead mutation) in complex with an unknown peptide substrate
Method: single particle / : Chengdong H, Simin W, Xuan C

PDB-9lwn:
Nonamer Msp1 from S.cerevisiae (with a catalytic dead mutation) in complex with an unknown peptide substrate
Method: single particle / : Chengdong H, Simin W, Xuan C

EMDB-63416:
Octamer Msp1 from S.cerevisiae (with a catalytic dead mutation) in complex with an unknown peptide substrate
Method: single particle / : Chengdong H, Simin W, Xuan C

PDB-9lv9:
Octamer Msp1 from S.cerevisiae (with a catalytic dead mutation) in complex with an unknown peptide substrate
Method: single particle / : Chengdong H, Simin W, Xuan C

EMDB-63593:
Decamer Msp1 from S.cerevisiae(with a catalytic dead mutation) in complex with an unknown peptide substrate
Method: single particle / : Chengdong H, Simin W, Xuan C

PDB-9m2x:
Decamer Msp1 from S.cerevisiae(with a catalytic dead mutation) in complex with an unknown peptide substrate
Method: single particle / : Chengdong H, Simin W, Xuan C

EMDB-63199:
Cryo-EM structure of D1R-Gs in complex with de novo designed GEM targeting TM1/2/4
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

EMDB-63200:
Cryo-EM structure of D1R-Gs in complex with de novo designed GEM targeting TM3/4/5
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

EMDB-63201:
Cryo-EM structure of D1R in complex with de novo designed negative allosteric GEM targeting TM5/6/7
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

EMDB-63202:
Cryo-EM structure of D1R-Gs in complex with de novo designed agonist-positive allosteric GEM targeting TM5/6/7
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

EMDB-63204:
Cryo-EM structure of D1R-Gs in complex with de novo designed GEM targetingTM1/2/4 and GEM targeting TM3/4/5, and agonist-positive allosteric GEM targeting TM5/6/7
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

PDB-9lle:
Cryo-EM structure of D1R-Gs in complex with de novo designed GEM targeting TM1/2/4
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

PDB-9llf:
Cryo-EM structure of D1R-Gs in complex with de novo designed GEM targeting TM3/4/5
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

PDB-9llg:
Cryo-EM structure of D1R in complex with de novo designed negative allosteric GEM targeting TM5/6/7
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

PDB-9llh:
Cryo-EM structure of D1R-Gs in complex with de novo designed agonist-positive allosteric GEM targeting TM5/6/7
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

PDB-9llj:
Cryo-EM structure of D1R-Gs in complex with de novo designed GEM targetingTM1/2/4 and GEM targeting TM3/4/5, and agonist-positive allosteric GEM targeting TM5/6/7
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

EMDB-63203:
Cryo-EM structure of D1R in complex with de novo designed GEM targeting TM1/2/4 and GEM targeting TM3/4/5, and negative allosteric GEM targeting TM5/6/7
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

PDB-9lli:
Cryo-EM structure of D1R in complex with de novo designed GEM targeting TM1/2/4 and GEM targeting TM3/4/5, and negative allosteric GEM targeting TM5/6/7
Method: single particle / : Guo J, Zhou Y, Cheng S, Zhang Y

EMDB-63404:
PSI-LHCI supercomplex binding with 4 Lhcas from M. polymorpha
Method: single particle / : Tsai PC, La Rocca R, Shen JR, Akita F

EMDB-63405:
PSI-4 LHCI dimer supercomplex from M. polymorpha
Method: single particle / : Tsai PC, La Rocca R, Shen JR, Akita F

PDB-9lut:
PSI-LHCI supercomplex binding with 4 Lhcas from M. polymorpha
Method: single particle / : Tsai PC, La Rocca R, Shen JR, Akita F

PDB-9luu:
PSI-4 LHCI dimer supercomplex from M. polymorpha
Method: single particle / : Tsai PC, La Rocca R, Shen JR, Akita F

EMDB-66412:
mouse PDCD5-TRiC-ADP complex
Method: single particle / : Song QQ, Cong Y

EMDB-65851:
The structure of NCP-motor-ARP module of ncBAF-nucleosome complex
Method: single particle / : Chen KJ, Chen ZC

EMDB-65852:
The overall structure of ncBAF bound to the nucleosome
Method: single particle / : Chen KJ, Chen ZC

EMDB-65853:
The structure of NCP-RA module of ncBAF-nucleosome complex
Method: single particle / : Chen KJ, Chen ZC

EMDB-65854:
The structure of ARP module in ncBAF complex
Method: single particle / : Chen KJ, Chen ZC

PDB-9wbz:
The structure of NCP-motor-ARP module of ncBAF-nucleosome complex
Method: single particle / : Chen KJ, Chen ZC

PDB-9wc0:
The structure of NCP-RA module of ncBAF-nucleosome complex
Method: single particle / : Chen KJ, Chen ZC

PDB-9wc1:
The structure of ARP module in ncBAF complex
Method: single particle / : Chen KJ, Chen ZC

EMDB-64929:
Cryo-EM structure of the multi-component acyltransferase complex MucABC from Streptococcus macacae at a stoichiometric ratio of 4:2:2
Method: single particle / : Luo Z, Shen Z, Liao G, Tang X, Pan X

EMDB-64933:
Cryo-EM structure of the multi-component acyltransferase complex MucABC from Streptococcus macacae at a stoichiometric ratio of 4:4:4
Method: single particle / : Luo Z, Shen Z, Liao G, Tang X, Pan X

PDB-9vbo:
Cryo-EM structure of the multi-component acyltransferase complex MucABC from Streptococcus macacae at a stoichiometric ratio of 4:2:2
Method: single particle / : Luo Z, Shen Z, Liao G, Tang X, Pan X

PDB-9vbt:
Cryo-EM structure of the multi-component acyltransferase complex MucABC from Streptococcus macacae at a stoichiometric ratio of 4:4:4
Method: single particle / : Luo Z, Shen Z, Liao G, Tang X, Pan X

EMDB-66358:
Cryo-EM structure of TMEM63A-digitonin-cholesterol
Method: single particle / : Lin Y, Zhou Z, Han Y, Cheng D, Wang H, Ju L, Zhang Y, Cox DC, Corry B

PDB-9wxv:
Cryo-EM structure of TMEM63A-digitonin-cholesterol
Method: single particle / : Lin Y, Zhou Z, Han Y, Cheng D, Wang H, Ju L, Zhang Y, Cox DC, Corry B

EMDB-74451:
Cryo-EM structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1) in complex with APPB, composite map
Method: single particle / : Kirsh JM, Ochoa JM, Soroush-Pejrimovsky MT, Kaudeer BY, Clemons WM

EMDB-74452:
Cryo-EM structure of Hydrogenivirga sp. MraY in complex with APPB
Method: single particle / : Kaudeer BY, Clemons WM

EMDB-75257:
Cryo-EM structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1) in complex with APPB, consensus map
Method: single particle / : Kirsh JM, Ochoa JM, Soroush-Pejrimovsky MT, Kaudeer BY, Clemons WM

EMDB-75258:
Cryo-EM structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1) in complex with APPB, Chain A map
Method: single particle / : Kirsh JM, Ochoa JM, Soroush-Pejrimovsky MT, Kaudeer BY, Clemons WM

EMDB-75259:
Cryo-EM structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1) in complex with APPB, Chain B map
Method: single particle / : Kirsh JM, Ochoa JM, Soroush-Pejrimovsky MT, Kaudeer BY, Clemons WM

PDB-9znn:
Cryo-EM structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1) in complex with APPB
Method: single particle / : Kirsh JM, Ochoa JM, Soroush-Pejrimovsky MT, Kaudeer BY, Clemons WM

PDB-9zno:
Cryo-EM structure of Hydrogenivirga sp. MraY in complex with APPB
Method: single particle / : Kaudeer BY, Clemons WM

EMDB-66145:
Cryo-EM structure of the apo-ConsOR5-Gs complex
Method: single particle / : Rong NK, Zhang MH, Yang F, Sun JP

PDB-9wpm:
Cryo-EM structure of the apo-ConsOR5-Gs complex
Method: single particle / : Rong NK, Zhang MH, Yang F, Sun JP

EMDB-74763:
HIV-1 CH505.N197D Env Ectodomain (Mature VLPs)
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-74779:
HIV-1 CH505.N197D Env Ectodomain (Immature VLPs)
Method: subtomogram averaging / : Croft JT, Lee KK

EMDB-74786:
HIV-1 Env BG505.SOSIP
Method: subtomogram averaging / : Croft JT, Lee KK

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more