[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 824 items for (author: chen & dd)

EMDB-63614:
Structure-based discovery of potent agonists of the orphan receptor GPR139
Method: single particle / : Cabezadevaca I, Trapkov B, Shen L, Pezeshki M, Zhang XH, Liu Z, Hauser AS, Carlsson J

EMDB-66205:
Cryo-EM structure of DAMGO-muOR-Gz-scFv16 complex
Method: single particle / : Zhang H, Wang X, Xi K, Shen Q, Xue J, Zhu Y, Yang G, Zhang Y

EMDB-66207:
Cryo-EM structure of DAMGO-muOR-arrestin-1-Fab30 complex
Method: single particle / : Zhang H, Wang X, Xi K, Shen Q, Xue J, Zhu Y, Yang G, Zhang Y

EMDB-66208:
Cryo-EM structure of endomorphin-1-muOR-Gz-scFv16 complex
Method: single particle / : Zhang H, Wang X, Xi K, Shen Q, Xue J, Zhu Y, Yang G, Zhang Y

EMDB-66209:
Cryo-EM structure of endomorphin-1-muOR-arrestin2-Fab30 complex
Method: single particle / : Zhang H, Wang X, Xi K, Shen Q, Xue J, Zhu Y, Yang G, Zhang Y

EMDB-62643:
PltBd1/PltBd2 heteropentameric holotoxin from S. diarizonae
Method: single particle / : Chen Z, Wang DD, Gao X

EMDB-62644:
PltBd1/PltBd2 heteropentameric holotoxin from E. coli
Method: single particle / : Chen Z, Wang DD, Gao X

EMDB-62645:
PltBd1 homopentameric holotoxin from E. coli
Method: single particle / : Chen Z, Wang DD, Gao X

EMDB-62646:
PltBd2 homopentameric holotoxin from E. coli
Method: single particle / : Chen Z, Wang DD, Gao X

EMDB-64766:
Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
Method: single particle / : Kang H, Yang Y, Liu Y, Li M, Zhang L, Lin Y, Rao Z, Lou Z

EMDB-64768:
Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
Method: single particle / : Kang H, Yang Y, Liu Y, Li M, Zhang L, Lin Y, Rao Z, Lou Z

EMDB-64769:
Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
Method: single particle / : Kang H, Yang Y, Liu Y, Li M, Zhang L, Lin Y, Rao Z, Lou Z

EMDB-64770:
Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
Method: single particle / : Kang H, Yang Y, Liu Y, Li M, Zhang L, Lin Y, Rao Z, Lou Z

PDB-9v44:
Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
Method: single particle / : Kang H, Yang Y, Liu Y, Li M, Zhang L, Lin Y, Rao Z, Lou Z

PDB-9v46:
Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
Method: single particle / : Kang H, Yang Y, Liu Y, Li M, Zhang L, Lin Y, Rao Z, Lou Z

PDB-9v47:
Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
Method: single particle / : Kang H, Yang Y, Liu Y, Li M, Zhang L, Lin Y, Rao Z, Lou Z

PDB-9v48:
Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
Method: single particle / : Kang H, Yang Y, Liu Y, Li M, Zhang L, Lin Y, Rao Z, Lou Z

EMDB-62862:
Vitamin K-dependent gamma-carboxylase in complex with Coagulation factor IX and vitamin K
Method: single particle / : Hang J, Chen DD, Zhong QH

EMDB-62863:
double-mutant (K217A & K218A) Vitamin K-dependent gamma-carboxylase in complex with Coagulation factor IX and vitamin K
Method: single particle / : Hang J, Chen DD, Zhong QH

EMDB-62864:
double-mutant (K217A & K218A) Vitamin K-dependent gamma-carboxylase in complex with coagulation factors X and vitamin K
Method: single particle / : Hang J, Chen DD, Zhong QH

EMDB-46758:
Cryo-EM structure of neutralizing murine antibody WS.HSV-1.24 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-46759:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E.DS
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-46760:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-46761:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-46762:
Cryo-EM structure of gB-Ecto.516P.531E.DS, a prefusion-stabilized HSV-1 glycoprotein B extracellular domain
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-46765:
Cryo-EM structure of gB-Ecto.516P, an HSV-1 glycoprotein B extracellular domain
Method: single particle / : Roark RS, Lawrence L, Kwong PD

EMDB-62298:
Cryo-EM structure of the compound 4-bound human relaxin family peptide receptor 3 (RXFP3)-Gi complex
Method: single particle / : Chen Y, Zhou QT, Yan SY, Yan JH, Yang DH, Chen J, Wang MW, Rao QD, Dai AT, Yin WC, Shen DD, Zhang Y, Xia T, Stevens RC, Xu HE, Zhao LH

EMDB-48523:
RM017 Fab in complex with Apex-GT6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

PDB-9mqg:
RM017 Fab in complex with Apex-GT6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-44341:
RM038 Fab in complex with Apex-GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-44342:
RM018 Fab in complex with Apex GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

PDB-9b8b:
RM038 Fab in complex with Apex-GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

PDB-9b8c:
RM018 Fab in complex with Apex GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-70469:
BG505 MD39.3 SOSIP.664 in complex with 3BC315, BG18 and VRC01 Fabs
Method: single particle / : Ozorowski G, Phulera S, Ward AB

EMDB-70470:
BG505 MD39.3 Env gp151 MPER nanodisc in complex with 10E8, BG18 and VRC01 Fabs (2x 10E8 Fabs)
Method: single particle / : Rantalainen K, Ozorowski G, Gharpure A, Ward AB

EMDB-70471:
BG505 MD39.3 Env gp151 MPER nanodisc in complex with 10E8, BG18 and VRC01 Fabs (1x 10E8 Fab)
Method: single particle / : Rantalainen K, Ozorowski G, Gharpure A, Ward AB

PDB-9ogl:
BG505 MD39.3 SOSIP.664 in complex with 3BC315, BG18 and VRC01 Fabs
Method: single particle / : Ozorowski G, Phulera S, Ward AB

PDB-9ogm:
BG505 MD39.3 Env gp151 MPER nanodisc in complex with 10E8, BG18 and VRC01 Fabs (1x 10E8 Fab)
Method: single particle / : Rantalainen K, Ozorowski G, Gharpure A, Ward AB

EMDB-61503:
Rat hepatitis E virus capsid protein E2s domain in complex with Fab C6
Method: single particle / : Liu L, Zheng Q, Li S, Xia N

EMDB-61504:
Hepatitis E virus capsid protein E2s domain (genotype I) in complex with Fab C6
Method: single particle / : Liu L, Zheng Q, Li S, Xia N

EMDB-61505:
Hepatitis E virus capsid protein E2s domain (genotype IV) in complex with Fab C6
Method: single particle / : Liu L, Zheng Q, Li S, Xia N

EMDB-61506:
Rat hepatitis E virus capsid protein E2s domain in complex with Fab C158
Method: single particle / : Liu L, Zheng Q, Li S, Xia N

EMDB-61507:
Hepatitis E virus capsid protein E2s domain (genotype I) in complex with Fab C158
Method: single particle / : Liu L, Zheng Q, Li S, Xia N

EMDB-61508:
Rat hepatitis E virus capsid protein E2s domain in complex with Fab C127
Method: single particle / : Liu L, Zheng Q, Li S, Xia N

EMDB-61509:
Rat hepatitis E virus capsid protein E2s domain in complex with Fab C131
Method: single particle / : Liu L, Zheng Q, Li S, Xia N

EMDB-61510:
Rat hepatitis E virus capsid protein E2s domain in complex with Fab C145
Method: single particle / : Liu L, Zheng Q, Li S, Xia N

EMDB-61511:
Rat hepatitis E virus capsid protein E2s domain in complex with Fab H4
Method: single particle / : Liu L, Zheng Q, Li S, Xia N

EMDB-61512:
Hepatitis E virus capsid protein E2s domain (genotype I) in complex with Fab H4
Method: single particle / : Liu L, Zheng Q, Li S, Xia N

PDB-9jie:
Rat hepatitis E virus capsid protein E2s domain in complex with Fab C6
Method: single particle / : Liu L, Zheng Q, Li S

PDB-9jif:
Hepatitis E virus capsid protein E2s domain (genotype I) in complex with Fab C6
Method: single particle / : Liu L, Zheng Q, Li S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more