[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,549 items for (author: chao & w)

EMDB-69221:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11
Method: single particle / : Li XZ, Jiang Y

EMDB-69482:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11 local refinement (Masked on CDK2-CRBN)
Method: single particle / : Li XZ, Jiang Y

EMDB-69484:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11 local refinement (Masked on CDK2-CRBN-DDB1)
Method: single particle / : Li XZ, Jiang Y

EMDB-69485:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11 consensus refinement
Method: single particle / : Li XZ, Jiang Y

PDB-23sr:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11
Method: single particle / : Li XZ, Jiang Y

EMDB-75506:
Cryo-EM map of Ascl1-E12a in complex with NRCAM nucleosome without scFv
Method: single particle / : Zhou BR, Bai Y

EMDB-63580:
Cryo-EM structure of AKG bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-63581:
Cryo-EM structure of Itaconic acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-63583:
Cryo-EM structure of Succinic Acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-80947:
Cryo-EM structure of Maleic Acid bound OXGR1-Gq complex
Method: single particle / : Zhang X, Liu H

PDB-26xh:
Cryo-EM structure of Maleic Acid bound OXGR1-Gq complex
Method: single particle / : Zhang X, Liu H

PDB-9m1r:
Cryo-EM structure of AKG bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9m1s:
Cryo-EM structure of Itaconic acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9m1u:
Cryo-EM structure of Succinic Acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-73343:
Cryo-EM structure of the VPS13C N-terminal region in complex with Calmodulin
Method: single particle / : Li D, Reinisch KM

EMDB-73344:
Cryo-EM structure of the VPS13C C-terminal region
Method: single particle / : Li D, Reinisch KM

EMDB-73345:
Consensus map of full-length human VPS13C in complex with calmodulin
Method: single particle / : Li D, Reinisch KM

EMDB-73373:
Full-length human VPS13C in complex with calmodulin from the CryoEM composite map
Method: single particle / : Li D, Reinisch KM

PDB-9yqp:
Cryo-EM structure of the VPS13C N-terminal region in complex with Calmodulin
Method: single particle / : Li D, Reinisch KM

PDB-9yqq:
Cryo-EM structure of the VPS13C C-terminal region
Method: single particle / : Li D, Reinisch KM

PDB-9yrm:
CryoEM Structure of VPS13 protein, 1-1390 from C. thermophilum, in complex with calmodulin
Method: single particle / : Li D, Reinisch KM

PDB-9yrp:
Full-length human VPS13C in complex with calmodulin from the CryoEM composite map
Method: single particle / : Li D, Reinisch KM

EMDB-64587:
Local refinement of Succinate bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-64588:
Local refinement of maleic acid bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-64589:
Local refinement of ITA bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-64590:
Local refinement of AKG bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9uxn:
Local refinement of Succinate bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9uxo:
Local refinement of maleic acid bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9uxp:
Local refinement of ITA bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9uxq:
Local refinement of AKG bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-67871:
DRT4 homohexamer
Method: single particle / : Xiao J, Wang L

EMDB-67946:
DRT4 homohexamer with dGTPaS
Method: single particle / : Xiao J, Wang L

EMDB-67947:
DRT4 homohexamer with dATP
Method: single particle / : Xiao J, Wang L

EMDB-67950:
DRT4 homohexamer with dATP, dGTPaS, SSB, RNA
Method: single particle / : Xiao J, Wang L

EMDB-68056:
DRT4 homohexamer with dATP, SSB
Method: single particle / : Xiao J, Wang L

EMDB-69681:
DRT4 homohexamer with dGTP
Method: single particle / : Wang L, Li J

EMDB-69682:
DRT4 homohexamer with dGTP, GMP
Method: single particle / : Wang L, Li J

EMDB-69683:
DRT4 homohexamer with dGTP, RNA
Method: single particle / : Wang L, Li J

EMDB-69684:
DRT4 homohexamer with dGTP, ssRNA (local refinement)
Method: single particle / : Wang L, Li J

PDB-21ou:
DRT4 homohexamer
Method: single particle / : Xiao J, Wang L

PDB-21ro:
DRT4 homohexamer with dGTPaS
Method: single particle / : Xiao J, Wang L

PDB-21rp:
DRT4 homohexamer with dATP
Method: single particle / : Xiao J, Wang L

PDB-21rs:
DRT4 homohexamer with dATP, dGTPaS, SSB, RNA
Method: single particle / : Xiao J, Wang L

PDB-21wo:
DRT4 homohexamer with dATP, SSB
Method: single particle / : Xiao J, Wang L

PDB-24na:
DRT4 homohexamer with dGTP
Method: single particle / : Wang L, Li J

PDB-24nb:
DRT4 homohexamer with dGTP, GMP
Method: single particle / : Wang L, Li J

PDB-24nc:
DRT4 homohexamer with dGTP, RNA
Method: single particle / : Wang L, Li J

PDB-24nd:
DRT4 homohexamer with dGTP, ssRNA (local refinement)
Method: single particle / : Wang L, Li J

EMDB-64742:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

PDB-9v2w:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Li H, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more