[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 819 items for (author: camp & l)

EMDB-53545:
Drosophila MSLHAT nucleosome complex H4K16ac postcatalytic H3K36me3 reader state overall refinement
Method: single particle / : Mueller M, Kolesnikova O, Doudin M, Hoffmann T, Becker P, Eustermann S

EMDB-53544:
Drosophila MSL HAT nucleosome complex H4K16ac postcatalytic H3K36me3 reader state focused refinement
Method: single particle / : Mueller M, Kolesnikova O, Doudin M, Hoffmann T, Becker P, Eustermann S

EMDB-53543:
Drosophila MSL HAT nucleosome complex H3K36me3 reader state
Method: single particle / : Mueller M, Kolesnikova O, Doudin M, Hoffmann T, Becker P, Eustermann S

EMDB-53542:
Drosophila MSL HAT nucleosome complex H4K16ac post-catalytic state
Method: single particle / : Mueller M, Kolesnikova O, Doudin M, Hoffmann T, Becker P, Eustermann S

EMDB-53541:
MSL HAT nucleosome complex active H4K16Ac state Overall refinement
Method: single particle / : Mueller M, Kolesnikova O, Doudin M, Hoffmann T, Eustermann S

EMDB-53540:
MSL HAT nucleosome complex active H4K16Ac state
Method: single particle / : Mueller M, Kolesnikova O, Doudin M, Hoffmann T, Eustermann S

EMDB-53546:
Drosophila MSL HAT nucleosome complex H4K16ac postcatalytic H3K36me3 reader state
Method: single particle / : Mueller M, Kolesnikova O, Doudin M, Hoffmann T, Becker P, Eustermann S

EMDB-76080:
DNA-guided Cas12a
Method: single particle / : Fregoso Ocampo R, Taylor DW, Jain PK, Orosco C, West MW

PDB-11vq:
DNA-guided Cas12a
Method: single particle / : Fregoso Ocampo R, Taylor DW, Jain PK, Orosco C, West MW

EMDB-79038:
CryoEM structure of integrin aEb7 bound to Bly7 fab
Method: single particle / : Hollis JA, Campbell MG

EMDB-79037:
CryoEM structure of integrin a4b7 bound to act1 Fab
Method: single particle / : Hollis JA, Campbell MG

EMDB-55069:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Left Arm map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-55070:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Non-catalytic Ub, Left Arm map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-55071:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Non-catalytic Ub, Right Arm map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-55072:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Right Arm map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-55073:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Ub (P1') map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-55074:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Ub (P2) and Ub (P3) map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-55077:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub7 complex (Ub (P1') map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55079:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub7 complex (Consensus Map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55080:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub7 complex (Left Arm map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55081:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub7 complex (Right Arm map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55082:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub7 complex (Ub (P2) and Ub (P3) map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55085:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub4 complex (Consensus map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55086:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub4 complex (Left Arm map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55088:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub4 complex (Right Arm map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55089:
Cryo-EM structure of ARISCdC(E33A):K63-Ub4 complex (Ub (P1') map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55090:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Consensus Map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-55118:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub4 complex (Composite map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55119:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub7 complex (Composite map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55122:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Composite map)
Method: single particle / : Foglizzo M, Zeqiraj E

PDB-9sqv:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub4 complex (Composite map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

PDB-9sqw:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub7 complex (Composite map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

PDB-9sqy:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Composite map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-70641:
Monomeric ADAR2_E488Q bound to dsRNA sequence derived from human GLI1 gene
Method: single particle / : Matthews MM, Wolf M

EMDB-70719:
cryoEM structure of IRAK4:KT-474:CRBN-DDB1 ternary complex
Method: single particle / : Fei X, Ramanathan A, Diagle C, Ford M, Campbell V, Zheng X, Li H, Sintchak M, Kamadurai H, Miller R, Kazmirski S, Huang X, Weiss M, Manolfi N, Zhu X

PDB-9opj:
cryoEM structure of IRAK4:KT-474:CRBN-DDB1 ternary complex
Method: single particle / : Fei X, Ramanathan A, Diagle C, Ford M, Campbell V, Zheng X, Li H, Sintchak M, Kamadurai H, Miller R, Kazmirski S, Huang X, Weiss M, Manolfi N, Zhu X

EMDB-57240:
Cryo-EM structure of Bacillus subtilis DnaB
Method: single particle / : Campoy RR, Guyet A, Pelliciari S, Murray H, Ilangovan A

PDB-29km:
Cryo-EM structure of Bacillus subtilis DnaB
Method: single particle / : Campoy RR, Guyet A, Pelliciari S, Murray H, Ilangovan A

EMDB-73108:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-73109:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

EMDB-73110:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9ymj:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9ymk:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

PDB-9yml:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-75283:
SemiClosed Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with a semi-closed active site (closed TL and SI3, open RH-FL)
Method: single particle / : Dhingra Y, Darst SA

EMDB-75284:
CBR9379 bound Open1 Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with an open active site (open TL, SI3 and RH-FL)
Method: single particle / : Dhingra Y, Darst SA

EMDB-75285:
CBR9379 bound Open2 Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with an open active site (open TL, SI3 and RH-FL)
Method: single particle / : Dhingra Y, Darst SA

EMDB-75286:
Closed Mtb-EC: Cryo-EM structure of Mtb RNAP elongation complex (substrate loading mimic) with a closed active site (closed TL and RH-FL)
Method: single particle / : Dhingra Y, Darst SA

EMDB-75287:
Open Mtb-EC: Cryo-EM structure of Mtb RNAP elongation complex (substrate loading mimic) with an open active site (open TL and RH-FL)
Method: single particle / : Dhingra Y, Darst SA

EMDB-75288:
SemiClosed Mtb-EC: Cryo-EM structure of Mtb RNAP elongation complex (substrate loading mimic) with a semiclosed active site (closed TL, open RH-FL)
Method: single particle / : Dhingra Y, Darst SA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more