[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 376 items for (author: cameron & m)

EMDB-70610:
Cryo-EM structure of PCMTD1-ELOBC-CUL5-RBX2 (CRL5-PCMTD1)
Method: single particle / : Pang EZ, Zhao B, Flowers C, Oroudjeva E, Winters JB, Pandey V, Sawaya MR, Wohlschlegel W, Loo JA, Rodriguez JA, Clarke SG

EMDB-70612:
Cryo-EM structure of neddylated PCMTD1-ELOBC-CUL5-RBX2 (N8-CRL5-PCMTD1)
Method: single particle / : Pang EZ, Zhao B, Flowers C, Oroudjeva E, Winters JB, Pandey V, Sawaya MR, Wohlschlegel W, Loo JA, Rodriguez JA, Clarke SG

EMDB-70630:
Consensus map: Cryo-EM structure of PCMTD1-ELOBC-CUL5-RBX2 (CRL5-PCMTD1)
Method: single particle / : Pang EZ, Zhao B, Flowers C, Oroudjeva E, Winters JB, Pandey V, Sawaya MR, Wohlschlegel W, Loo JA, Rodriguez JA, Clarke SG

EMDB-70631:
Focused map of CUL5-RBX2: Cryo-EM structure of PCMTD1-ELOBC-CUL5-RBX2 (CRL5-PCMTD1)
Method: single particle / : Pang EZ, Zhao B, Flowers C, Oroudjeva E, Winters JB, Pandey V, Sawaya MR, Wohlschlegel W, Loo JA, Rodriguez JA, Clarke SG

EMDB-70632:
Focused map of PCMTD1-ELOBC: Cryo-EM structure of PCMTD1-ELOBC-CUL5-RBX2 (CRL5-PCMTD1)
Method: single particle / : Pang EZ, Zhao B, Flowers C, Oroudjeva E, Winters JB, Pandey V, Sawaya MR, Wohlschlegel W, Loo JA, Rodriguez JA, Clarke SG

EMDB-70633:
Focused map of PCMTD1: Cryo-EM structure of PCMTD1-ELOBC-CUL5-RBX2 (CRL5-PCMTD1)
Method: single particle / : Pang EZ, Zhao B, Flowers C, Oroudjeva E, Winters JB, Pandey V, Sawaya MR, Wohlschlegel W, Loo JA, Rodriguez JA, Clarke SG

PDB-9oma:
Cryo-EM structure of PCMTD1-ELOBC-CUL5-RBX2 (CRL5-PCMTD1)
Method: single particle / : Pang EZ, Zhao B, Flowers C, Oroudjeva E, Winters JB, Pandey V, Sawaya MR, Wohlschlegel W, Loo JA, Rodriguez JA, Clarke SG

PDB-9omf:
Cryo-EM structure of neddylated PCMTD1-ELOBC-CUL5-RBX2 (N8-CRL5-PCMTD1)
Method: single particle / : Pang EZ, Zhao B, Flowers C, Oroudjeva E, Winters JB, Pandey V, Sawaya MR, Wohlschlegel W, Loo JA, Rodriguez JA, Clarke SG

PDB-9n9d:
MicroED structure of papain co-crystallized with E-64C
Method: electron crystallography / : Vlahakis N, Rodriguez JA

PDB-9nae:
MicroED structure of papain co-crystallized with E-64
Method: electron crystallography / : Vlahakis N, Rodriguez JA

PDB-9nag:
MicroED structure of the apo-form of papain
Method: electron crystallography / : Vlahakis N, Rodriguez JA

PDB-9nao:
MicroED structure of papain complexed with natural product E64-A65
Method: electron crystallography / : Vlahakis NW, Rodriguez JA

PDB-9nar:
MicroED structure of papain microcrystals soaked with E-64 for 10 minutes
Method: electron crystallography / : Vlahakis NW, Rodriguez JA

PDB-9nax:
MicroED structure of the papain-E-64 complex from microcrystals soaked with crude biosynthetic reaction mixture
Method: electron crystallography / : Vlahakis NW, Rodriguez JA

PDB-9nay:
MicroED structure of papain complexed with natural product E-64-A65 from microcrystals soaked in crude biosynthetic reaction mixture
Method: electron crystallography / : Vlahakis NW, Rodriguez JA

PDB-9nbp:
MicroED structure of the papain-E-64 complex from microcrystals mixed on-grid with microarrayed ligand
Method: electron crystallography / : Vlahakis N, Rodriguez JA

PDB-9nbq:
MicroED structure of papain co-crystallized with E-64D
Method: electron crystallography / : Vlahakis N, Rodriguez JA

PDB-9nc1:
MicroED structure of papain-E-64 complex from microcrystals soaked with protease inhibitor cocktail
Method: electron crystallography / : Vlahakis N, Rodriguez JA

PDB-9nca:
MicroED structure of microcrystals soaked with a mixture of E-64, E-64C, and E-64D
Method: electron crystallography / : Vlahakis N, Rodriguez JA

EMDB-44199:
Biased agonist bound CB1-Gi structure
Method: single particle / : Rangari VA, O'Brien ES, Kobilka BK, Krishna Kumar K, Majumdar S

EMDB-44247:
Biased agonist bound CB1-Gi structure
Method: single particle / : Rangari VA, O'Brien ES, Kobilka BK, Krishna Kumar K, Majumdar S

PDB-9b54:
Biased agonist bound CB1-Gi structure
Method: single particle / : Rangari VA, O'Brien ES, Kobilka BK, Krishna Kumar K, Majumdar S

PDB-9b65:
Biased agonist bound CB1-Gi structure
Method: single particle / : Rangari VA, O'Brien ES, Kobilka BK, Krishna Kumar K, Majumdar S

EMDB-45253:
Merbecovirus MOW15-22 Spike glycoprotein RBD bound to the P. davyi ACE2
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9c6o:
Merbecovirus MOW15-22 Spike glycoprotein RBD bound to the P. davyi ACE2
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-47823:
Structure of the prefusion HKU5-19s Spike trimer (conformation 1)
Method: single particle / : Park YJ, Gen R, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-48048:
Structure of the prefusion HKU5-19s Spike trimer (conformation 2)
Method: single particle / : Park YJ, Gen R, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-9ea0:
Structure of the prefusion HKU5-19s Spike trimer (conformation 1)
Method: single particle / : Park YJ, Gen R, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-9eh8:
Structure of the prefusion HKU5-19s Spike trimer (conformation 2)
Method: single particle / : Park YJ, Gen R, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-46512:
Structure of the HKU5 RBD bound to the P. abramus ACE2 receptor
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-47358:
Structure of the HKU5-19s RBD bound to the Bos taurus ACE2 receptor
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-9d32:
Structure of the HKU5 RBD bound to the P. abramus ACE2 receptor
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-9e0i:
Structure of the HKU5-19s RBD bound to the Bos taurus ACE2 receptor
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-46691:
Merbecovirus PnNL2018B Spike glycoprotein RBD bound to the P. Nathusii ACE2
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9dak:
Merbecovirus PnNL2018B Spike glycoprotein RBD bound to the P. Nathusii ACE2
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-60483:
Cryo-EM structure of P.nat ACE2 mutant in complex with MOW15-22 RBD
Method: single particle / : Tang J, Deng Z

PDB-8zuf:
Cryo-EM structure of P.nat ACE2 mutant in complex with MOW15-22 RBD
Method: single particle / : Tang J, Deng Z

EMDB-44540:
Salmonella undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (ArnC)
Method: single particle / : Guo Y, Borek D

EMDB-44542:
Salmonella undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (ArnC) bound to UDP
Method: single particle / : Guo Y, Borek D, Center for Structural Biology of Infectious Diseases (CSBID)

PDB-9bhc:
Salmonella undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (ArnC)
Method: single particle / : Guo Y, Borek D, Center for Structural Biology of Infectious Diseases (CSBID)

PDB-9bhe:
Salmonella undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (ArnC) bound to UDP
Method: single particle / : Guo Y, Borek D, Center for Structural Biology of Infectious Diseases (CSBID)

EMDB-39300:
hTLR3/minibinder 7.7
Method: single particle / : Kim H

EMDB-39301:
hTLR3/minibinder 8.6
Method: single particle / : Kim H

PDB-8yht:
hTLR3/minibinder 7.7
Method: single particle / : Kim H, Kim H

PDB-8yhu:
hTLR3/minibinder 8.6
Method: single particle / : Kim H, Kim H

EMDB-50173:
Trypanosoma brucei nuclear cap-binding complex (CBC) bound to cap0
Method: single particle / : Bernhard H, Dolce LG, Kowalinski E

EMDB-50217:
Trypanosoma brucei nuclear cap-binding complex (CBC) bound to cap4
Method: single particle / : Bernhard H, Warminski M, Dolce LG, Kowalinski E

PDB-9f3f:
Trypanosoma brucei nuclear cap-binding complex (CBC) bound to cap0
Method: single particle / : Bernhard H, Dolce LG, Kowalinski E

PDB-9f67:
Trypanosoma brucei nuclear cap-binding complex (CBC) bound to cap4
Method: single particle / : Bernhard H, Warminski M, Dolce LG, Kowalinski E

EMDB-47577:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV NTD-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more