[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 58 items for (author: azad & k)

EMDB-19978:
Outward-open structure of Drosophila dopamine transporter bound to an atypical non-competitive inhibitor
Method: single particle / : Pedersen CN, Yang F, Ita S, Xu Y, Akunuri R, Trampari S, Neumann CMT, Desdorf LM, Schioett B, Salvino JM, Mortensen OV, Nissen P, Shahsavar A

EMDB-19979:
Inhibitor-free outward-open structure of Drosophila dopamine transporter
Method: single particle / : Pedersen CN, Yang F, Ita S, Xu Y, Akunuri R, Trampari S, Neumann CMT, Desdorf LM, Schioett B, Salvino JM, Mortensen OV, Nissen P, Shahsavar A

PDB-9euo:
Outward-open structure of Drosophila dopamine transporter bound to an atypical non-competitive inhibitor
Method: single particle / : Pedersen CN, Yang F, Ita S, Xu Y, Akunuri R, Trampari S, Neumann CMT, Desdorf LM, Schioett B, Salvino JM, Mortensen OV, Nissen P, Shahsavar A

PDB-9eup:
Inhibitor-free outward-open structure of Drosophila dopamine transporter
Method: single particle / : Pedersen CN, Yang F, Ita S, Xu Y, Akunuri R, Trampari S, Neumann CMT, Desdorf LM, Schioett B, Salvino JM, Mortensen OV, Nissen P, Shahsavar A

EMDB-29745:
Cryo-EM structure of the Mismatch Sensing Complex (I) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

EMDB-29746:
Cryo-EM structure of the Mismatch Uncoupling Complex (II) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

EMDB-29747:
Cryo-EM structure of the Wedge Alignment Complex (VIII) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

EMDB-29748:
Cryo-EM structure of the Primer Separation Complex (IX) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

EMDB-29749:
Cryo-EM structure of the Mismatch Locking Complex (III) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

EMDB-29750:
Cryo-EM structure of the Guide loop Engagement Complex (VI) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

EMDB-29751:
Cryo-EM structure of the Guide loop Engagement Complex (IV) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

EMDB-29752:
Cryo-EM structure of the Guide loop Engagement Complex (V) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

EMDB-41091:
Cryo-EM structure of the Backtracking Initiation Complex (VII) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

PDB-8g5i:
Cryo-EM structure of the Mismatch Sensing Complex (I) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

PDB-8g5j:
Cryo-EM structure of the Mismatch Uncoupling Complex (II) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

PDB-8g5k:
Cryo-EM structure of the Wedge Alignment Complex (VIII) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

PDB-8g5l:
Cryo-EM structure of the Primer Separation Complex (IX) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

PDB-8g5m:
Cryo-EM structure of the Mismatch Locking Complex (III) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

PDB-8g5n:
Cryo-EM structure of the Guide loop Engagement Complex (VI) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

PDB-8g5o:
Cryo-EM structure of the Guide loop Engagement Complex (IV) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

PDB-8g5p:
Cryo-EM structure of the Guide loop Engagement Complex (V) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

PDB-8t7e:
Cryo-EM structure of the Backtracking Initiation Complex (VII) of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Buchel G, Herbine KH, Sarfallah A, Sokolova VO, Zamudio-Ochoa A, Temiakov D

EMDB-14630:
Membrane-bound CHMP2A-CHMP3 filament (430 Angstrom diameter)
Method: helical / : Azad K, Desfosses A, Effantin G, Schoehn G, Weissenhorn W

EMDB-14631:
Membrane-bound CHMP2A-CHMP3 filament (410 Angstrom diameter)
Method: helical / : Azad K, Desfosses A, Effantin G, Schoehn G, Weissenhorn W

PDB-7zcg:
CHMP2A-CHMP3 heterodimer (430 Angstrom diameter)
Method: helical / : Azad K, Desfosses A, Effantin G, Schoehn G, Weissenhorn W

PDB-7zch:
CHMP2A-CHMP3 heterodimer (410 Angstrom diameter)
Method: helical / : Azad K, Desfosses A, Effantin G, Schoehn G, Weissenhorn W

EMDB-27491:
CryoEM structure of the A. aeolicus WzmWzt transporter bound to the native O antigen
Method: single particle / : Spellmon N, Muszynski A, Vlach J, Zimmer J

EMDB-27494:
CryoEM structure of the nucleotide-free and open channel A.aeolicus WzmWzt transporter
Method: single particle / : Spellmon N, Zimmer J, Vlach J

EMDB-27556:
CryoEM structure of the A. aeolicus WzmWzt transporter bound to 3-O-methyl-D-mannose
Method: single particle / : Spellmon N, Zimmer J

EMDB-27563:
CryoEM structure of the A. aeolicus WzmWzt transporter bound to the native O antigen and ADP
Method: single particle / : Spellmon N, Muszynski A, Vlach J, Zimmer J

EMDB-27564:
CryoEM structure of the A.aeolicus WzmWzt transporter bound to ATP
Method: single particle / : Spellmon N, Zimmer J, Vlach J

EMDB-27623:
CryoEM structure of the A. aeolicus WzmWzt transporter bound to ADP
Method: single particle / : Gorniak I, Zimmer J, Vlach J

PDB-8dku:
CryoEM structure of the A. aeolicus WzmWzt transporter bound to the native O antigen
Method: single particle / : Spellmon N, Muszynski A, Vlach J, Zimmer J

PDB-8dl0:
CryoEM structure of the nucleotide-free and open channel A.aeolicus WzmWzt transporter
Method: single particle / : Spellmon N, Zimmer J

PDB-8dn8:
CryoEM structure of the A. aeolicus WzmWzt transporter bound to 3-O-methyl-D-mannose
Method: single particle / : Spellmon N, Zimmer J

PDB-8dnc:
CryoEM structure of the A. aeolicus WzmWzt transporter bound to the native O antigen and ADP
Method: single particle / : Spellmon N, Muszynski A, Vlach J, Zimmer J

PDB-8dne:
CryoEM structure of the A.aeolicus WzmWzt transporter bound to ATP
Method: single particle / : Spellmon N, Zimmer J

PDB-8dou:
CryoEM structure of the A. aeolicus WzmWzt transporter bound to ADP
Method: single particle / : Gorniak I, Zimmer J

EMDB-25026:
Anaphase Promoting Complex delta APC7
Method: single particle / : Ferguson CJ, Brown NG, Prabu JR, Watson ER, Schulman BA, Bonni A

EMDB-25027:
Anaphase Promoting Complex delta APC7 + UBE2C,substrate,UbV,CDH1
Method: single particle / : Ferguson CJ, Brown NG, Prabu JR, Watson ER, Schulman BA, Bonni A

EMDB-9730:
Cryo-EM structure of Flock House Virus eluted particle
Method: single particle / : Banerjee M, Azad K

EMDB-9732:
Cryo-EM structure of Flock House Virus puffed particle
Method: single particle / : Banerjee M, Azad K

PDB-6itb:
Icosahedral asymmetric unit (iASU) model of the well-refined part of FHV eluted particle
Method: single particle / : Banerjee M, Azad K

PDB-6itf:
Icosahedral asymmetric unit (iASU) model of the less refined, coarse part of FHV eluted particle
Method: single particle / : Banerjee M, Azad K

EMDB-6590:
CSF trimer in closed conformation
Method: single particle / : Kong L, He L, de Val N, Morris CD, Vora N, Azadnia P, Sok D, Zhou B, Burton DR, Ward AB, Wilson IA, Zhu J

EMDB-6591:
CSF trimer in a post-fusion or intermediate state
Method: single particle / : Kong P, He L, de Val N, Morris CD, Vora N, Azadnia P, Sok D, Zhou B, Burton DR, Ward AB, Wilson IA, Zhu J

EMDB-6592:
CSF_closed_trimer in complex with the bnAb PGV04
Method: single particle / : Kong P, He L, de Val N, Morris CD, Vora N, Azadnia P, Sok D, Zhou B, Burton DR, Ward AB, Wilson IA, Zhu J

EMDB-6593:
CSF_trimer in a post-fusion or intermediate conformation bound to the bnAb PGV04
Method: single particle / : Kong L, He L, de Val N, Morris CD, Vora N, Azadnia P, Sok D, Zhou B, Burton DR, Ward AB, Wilson IA, Zhu J

EMDB-6621:
HIV-1 CSF-SOS envelope glycoprotein trimer
Method: single particle / : Kong L, He L, de Val N, Morris CD, Vora N, Azadnia P, Sok D, Zhou B, Burton DR, Ward AB, Wilson IA, Zhu J

EMDB-6622:
HIV-1 CSF-SOS envelope glycoprotein trimer bound to bnAb PGV04
Method: single particle / : Kong L, He L, de Val N, Morris CD, Vora N, Azadnia P, Sok D, Zhou B, Burton DR, Ward AB, Wilson IA, Zhu J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more