[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,092 items for (author: auer & m)

EMDB-58071:
Structure of the NaCT-Na-PF2 complex
Method: single particle / : Sauer DB, Song J, Marden JJ, Wang B, Rice WJ, Wang DN

EMDB-58072:
Structure of NaCT in NaCl
Method: single particle / : Sauer DB, Song J, Marden JJ, Wang B, Rice WJ, Wang DN

EMDB-58073:
Structure of NaCT in Choline Chloride
Method: single particle / : Sauer DB, Song J, Marden JJ, Wang B, Rice WJ, Wang DN

PDB-30ut:
Structure of the NaCT-Na-PF2 complex
Method: single particle / : Sauer DB, Song J, Marden JJ, Wang B, Rice WJ, Wang DN

PDB-30uu:
Structure of NaCT in NaCl
Method: single particle / : Sauer DB, Song J, Marden JJ, Wang B, Rice WJ, Wang DN

PDB-30uv:
Structure of NaCT in Choline Chloride
Method: single particle / : Sauer DB, Song J, Marden JJ, Wang B, Rice WJ, Wang DN

EMDB-54418:
Cryo-EM structure of human NHE6 in C1 symmetry
Method: single particle / : Feilen LP, Sach L, Tranchant EE, Lalic MR, Havelund JF, Brauer CM, Ginsthofer M, Ostendorf J, Ma L, Morrow EM, Faergeman NJ, Pedersen SF, Kragelund BB, Autzen HE

EMDB-54419:
Cryo-EM structure of human NHE6 in C2 symmetry
Method: single particle / : Feilen LP, Sach L, Tranchant EE, Lalic MR, Havelund JF, Brauer CM, Ginsthofer M, Ostendorf J, Ma L, Morrow EM, Faergeman NJ, Pedersen SF, Kragelund BB, Autzen HE

PDB-9s0r:
Cryo-EM structure of human NHE6 in C1 symmetry
Method: single particle / : Feilen LP, Sach L, Tranchant EE, Lalic MR, Havelund JF, Brauer CM, Ginsthofer M, Ostendorf J, Ma L, Morrow EM, Faergeman NJ, Pedersen SF, Kragelund BB, Autzen HE

PDB-9s0s:
Cryo-EM structure of human NHE6 in C2 symmetry
Method: single particle / : Feilen LP, Sach L, Tranchant EE, Lalic MR, Havelund JF, Brauer CM, Ginsthofer M, Ostendorf J, Ma L, Morrow EM, Faergeman NJ, Pedersen SF, Kragelund BB, Autzen HE

EMDB-58427:
Structure of human excitatory amino acid transporter 3 (EAAT3) in complex with B11 nanobody
Method: single particle / : Li A, Pike ACW, Baronina A, Rodstrom KEJ, Pascoa TC, Chi G, Stefanic S, Carpenter EP, Bullock AN, Dong YY, Sauer DB

PDB-31ic:
Structure of human excitatory amino acid transporter 3 (EAAT3) in complex with B11 nanobody
Method: single particle / : Li A, Pike ACW, Baronina A, Rodstrom KEJ, Pascoa TC, Chi G, Stefanic S, Carpenter EP, Bullock AN, Dong YY, Sauer DB

EMDB-71135:
Structure of MAb PhtD3 in complex with PhtD
Method: single particle / : Du J, Cui J, Lin Z, Eisenhauer J, Weiner DB, Pallesen J

EMDB-53186:
Human Mortalin (mitochondrial Hsp70) in complex with wild-type GrpE1
Method: single particle / : Bauer JA, Pinkas M

EMDB-53191:
Human Mortalin (mitochondrial Hsp70) in complex with GrpE1 phosphorylated at Ser-47
Method: single particle / : Bauer JA, Pinkas M

PDB-9qid:
Human Mortalin (mitochondrial Hsp70) in complex with wild-type GrpE1
Method: single particle / : Bauer JA, Pinkas M

PDB-9qin:
Human Mortalin (mitochondrial Hsp70) in complex with GrpE1 phosphorylated at Ser-47
Method: single particle / : Bauer JA, Pinkas M

EMDB-65508:
Cryo-EM structure of S1P2 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

EMDB-65510:
cryoEM structure of S1P3 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

PDB-9w0m:
Cryo-EM structure of S1P2 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

PDB-9w0o:
cryoEM structure of S1P3 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

EMDB-75049:
Human Excitatory Amino Acid Transporter 3 in 300 mM potassium and 0.1 mM Cmpd 3e in the outward-facing (OFS) state
Method: single particle / : Earsley A, Qiu B, Boudker O

EMDB-52502:
Cryo-EM structure of the C. elegans UBR4/KCMF1 complex (composite map)
Method: single particle / : Grabarczyk DB, Clausen T

EMDB-54186:
TRPC5 apo cryoEM map in the presence of pluronic acid (PA), state 2
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54187:
Human TRPC5 in complex with (-) englerin A, full occupancy, state 1, on 290 nm gold foil holes (HexAuFoil)
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54188:
Human TRPC5 in complex with (-) englerin A, full occupancy, state 2, on 290 nm gold foil holes (HexAuFoil)
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54189:
Human TRPC5 in complex with (-) englerin A, full occupancy, intermediary desensitized state
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54193:
Human TRPC5 in complex with (-) englerin A, partial occupancy (2EA:2LIP stoichiometry) state 1
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54204:
Human TRPC5 in complex with (-) englerin A, mixed occupancy, state 1
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54218:
Human TRPC5 in complex with (-) englerin A, mixed occupancy_2, state 2
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54219:
Human TRPC5 in complex with (-) englerin A, mixed occupancy, state 2
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54291:
Human TRPC5 in complex with (-) englerin A, partial occupancy (2EA:2LIP stoichiometry) state 2
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rrf:
TRPC5 apo cryoEM map in the presence of pluronic acid (PA), state 2
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rrm:
Human TRPC5 in complex with (-) englerin A, full occupancy, state 1, on 290 nm gold foil holes (HexAuFoil)
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rrn:
Human TRPC5 in complex with (-) englerin A, full occupancy, state 2, on 290 nm gold foil holes (HexAuFoil)
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rro:
Human TRPC5 in complex with (-) englerin A, full occupancy, intermediary desensitized state
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rrq:
Human TRPC5 in complex with (-) englerin A, partial occupancy (2EA:2LIP stoichiometry) state 1
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rru:
Human TRPC5 in complex with (-) englerin A, mixed occupancy, state 1
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rsg:
Human TRPC5 in complex with (-) englerin A, mixed occupancy_2, state 2
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rsh:
Human TRPC5 in complex with (-) englerin A, mixed occupancy, state 2
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rvv:
Human TRPC5 in complex with (-) englerin A, partial occupancy (2EA:2LIP stoichiometry) state 2
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-75048:
Human Excitatory Amino Acid Transporter 3 in 300 mM potassium and 0.1 mM Cmpd 3e in the intermediate outward-facing (iOFS) state
Method: single particle / : Earsley A, Qiu B, Boudker O

EMDB-56772:
split variant of Aquifex aeolicus lumazine synthase-derived nucleocapsid variant NC-4
Method: single particle / : Tetter S, Hilvert D

PDB-28ro:
split variant of Aquifex aeolicus lumazine synthase-derived nucleocapsid variant NC-4
Method: single particle / : Tetter S, Hilvert D

EMDB-68747:
Structure of CXCR4 in complex with a de-novo designed mini-protein antagonist
Method: single particle / : Banerjee R, Ganguly M, Banerjee N, Tiwari D, Muratspahic E, Baker D, Shukla AK

PDB-22xc:
Structure of CXCR4 in complex with a de-novo designed mini-protein antagonist
Method: single particle / : Banerjee R, Ganguly M, Banerjee N, Tiwari D, Muratspahic E, Baker D, Shukla AK

EMDB-56783:
MBP-maltose bound to distal DARPin (AHIR dodecamer scaffold system from split dataset with 8694 micrographs)
Method: single particle / : Ferreira DSM, Noble M, Rowland RJ, Fairhead M, Gittins O, von Delft F, Endicott J, Martin M, Pike ACW, Dlamini LS, Sauer DB

EMDB-56785:
MBP-maltose bound to distal DARPin (AHIR dodecamer scaffold system from split dataset with 8500 micrographs)
Method: single particle / : Ferreira DSM, Noble M, Rowland RJ, Fairhead M, Gittins O, von Delft F, Endicott J, Martin M, Pike ACW, Sauer DB, Dlamini LS

EMDB-56787:
MBP-maltose bound to distal DARPin (AHIR dodecamer scaffold system from split dataset with 7500 micrographs)
Method: single particle / : Ferreira DSM, Noble M, Rowland RJ, Fairhead M, Gittins O, von Delft F, Endicott J, Martin M, Pike ACW, Dlamini LS, Sauer DB

EMDB-56789:
MBP-maltose bound to distal DARPin (AHIR dodecamer scaffold system from split dataset with 6500 micrographs)
Method: single particle / : Ferreira DSM, Noble M, Rowland RJ, Fairhead M, Gittins O, von Delft F, Endicott J, Martin M, Pike ACW, Dlamini LS, Sauer DB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more