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Showing all 37 items for (author: al-shayeb & b)

EMDB-29561:
Cryo-EM structure of Cas1:Cas2-DEDDh:PAM-deficient prespacer complex
Method: single particle / : Skopintsev P, Tuck OT, Soczek KM, Doudna J

EMDB-29562:
Cryo-EM structure of Cas1:Cas2-DEDDh:PAM-containing prespacer complex
Method: single particle / : Skopintsev P, Tuck OT, Soczek KM, Doudna J

EMDB-29563:
Cryo-EM structure of Cas1:Cas2-DEDDh:half-site integration complex
Method: single particle / : Skopintsev P, Tuck OT, Soczek KM, Doudna J

EMDB-29564:
Cryo-EM structure of Cas1:Cas2-DEDDh:half-site integration complex linear CRISPR repeat conformation
Method: single particle / : Skopintsev P, Tuck OT, Soczek KM, Doudna J

EMDB-29565:
Cryo-EM structure of Cas1:Cas2-DEDDh:half-site integration complex bent CRISPR repeat conformation
Method: single particle / : Skopintsev P, Tuck OT, Soczek KM, Doudna J

PDB-8fy9:
Cryo-EM structure of Cas1:Cas2-DEDDh:PAM-deficient prespacer complex
Method: single particle / : Skopintsev P, Tuck OT, Soczek KM, Doudna J

PDB-8fya:
Cryo-EM structure of Cas1:Cas2-DEDDh:PAM-containing prespacer complex
Method: single particle / : Skopintsev P, Tuck OT, Soczek KM, Doudna J

PDB-8fyb:
Cryo-EM structure of Cas1:Cas2-DEDDh:half-site integration complex
Method: single particle / : Skopintsev P, Tuck OT, Soczek KM, Doudna J

PDB-8fyc:
Cryo-EM structure of Cas1:Cas2-DEDDh:half-site integration complex linear CRISPR repeat conformation
Method: single particle / : Skopintsev P, Tuck OT, Soczek KM, Doudna J

PDB-8fyd:
Cryo-EM structure of Cas1:Cas2-DEDDh:half-site integration complex bent CRISPR repeat conformation
Method: single particle / : Skopintsev P, Tuck OT, Soczek KM, Doudna J

EMDB-27320:
Cryo-EM structure of CasLambda (Cas12l) bound to crRNA and DNA
Method: single particle / : Al-Shayeb B, Skopintsev P, Soczek K, Doudna J

PDB-8dc2:
Cryo-EM structure of CasLambda (Cas12l) bound to crRNA and DNA
Method: single particle / : Al-Shayeb B, Skopintsev P, Soczek K, Doudna J

EMDB-23600:
Cryo-EM structure of CasPhi-2 (Cas12j) bound to crRNA and DNA
Method: single particle / : Pausch P, Soczek K

EMDB-23601:
Cryo-EM structure of CasPhi-2 (Cas12j) bound to crRNA and Phosphorothioate-DNA
Method: single particle / : Pausch P, Soczek K

EMDB-23678:
Cryo-EM structure of CasPhi-2 (Cas12j) bound to crRNA
Method: single particle / : Pausch P, Soczek K

PDB-7lys:
Cryo-EM structure of CasPhi-2 (Cas12j) bound to crRNA and DNA
Method: single particle / : Pausch P, Soczek K, Nogales E, Doudna J

PDB-7lyt:
Cryo-EM structure of CasPhi-2 (Cas12j) bound to crRNA and Phosphorothioate-DNA
Method: single particle / : Pausch P, Soczek K, Nogales E, Doudna J

PDB-7m5o:
Cryo-EM structure of CasPhi-2 (Cas12j) bound to crRNA
Method: single particle / : Pausch P, Soczek K, Nogales E, Doudna J

EMDB-22855:
Partial Cas6-RT-Cas1--Cas2 complex
Method: single particle / : Hoel CM, Wang JY

EMDB-22856:
Cas6-RT-Cas1--Cas2 complex
Method: single particle / : Hoel CM, Wang JY

PDB-7kft:
Partial Cas6-RT-Cas1--Cas2 complex
Method: single particle / : Hoel CM, Wang JY, Doudna JA, Brohawn SG

PDB-7kfu:
Cas6-RT-Cas1--Cas2 complex
Method: single particle / : Hoel CM, Wang JY, Doudna JA, Brohawn SG

EMDB-20266:
Cryo-EM structure of LbCas12a-crRNA: AcrVA4 (1:2 complex)
Method: single particle / : Knott GJ, Liu JJ

EMDB-20267:
Cryo-EM structure of LbCas12a-crRNA: AcrVA4 (2:2 complex)
Method: single particle / : Knott GJ, Liu JJ

PDB-6p7m:
Cryo-EM structure of LbCas12a-crRNA: AcrVA4 (1:2 complex)
Method: single particle / : Knott GJ, Liu JJ, Doudna JA

PDB-6p7n:
Cryo-EM structure of LbCas12a-crRNA: AcrVA4 (2:2 complex)
Method: single particle / : Knott GJ, Liu JJ, Doudna JA

PDB-6ny1:
CasX-gRNA-DNA(30bp) State II
Method: single particle / : Liu JJ, Orlova N, Nogales E, Doudna JA

PDB-6ny2:
CasX-gRNA-DNA(45bp) state I
Method: single particle / : Liu JJ, Orlova N, Nogales E, Doudna JA

PDB-6ny3:
CasX ternary complex with 30bp target DNA
Method: single particle / : Liu JJ, Orlova N, Nogales E, Doudna JA

EMDB-8987:
ApoCasX
Method: single particle / : Liu JJ, Orlova N

EMDB-8988:
CasX binary complex
Method: single particle / : Liu JJ, Orlova N

EMDB-8989:
CasX-gRNA-DNA (45T-20NT) State I
Method: single particle / : Liu JJ, Orlova N

EMDB-8990:
CasX-gRNA-DNA (45T-20NT) State II
Method: single particle / : Liu JJ, Orlova N

EMDB-8991:
CasX-gRNA-DNA (45T-45NT) State II
Method: single particle / : Liu JJ, Orlova N

EMDB-8994:
CasX-gRNA-DNA (30bp) State II
Method: single particle / : Liu JJ, Orlova N

EMDB-8980:
CasX ternary complex with 30bp target DNA
Method: single particle / : Liu JJ, Orlova N, Nogales E, Doudna JA

EMDB-8996:
CasX-gRNA-DNA(45bp) state I
Method: single particle / : Liu JJ, Orlova N, Nogales E, Doudna JA

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

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