[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 247 items for (author: akashi & s)

EMDB-38216:
Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with antibody O5C2

PDB-8xbf:
Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with antibody O5C2

EMDB-38453:
Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein in complex with ACE2 (1-up state)

EMDB-38454:
Structure of the SARS-CoV-2 EG.5.1 spike RBD in complex with ACE2

PDB-8xlm:
Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein in complex with ACE2 (1-up state)

PDB-8xln:
Structure of the SARS-CoV-2 EG.5.1 spike RBD in complex with ACE2

EMDB-37648:
SARS-CoV-2 EG.5.1 spike glycoprotein (1-up state)

EMDB-37650:
SARS-CoV-2 EG.5.1 spike glycoprotein (closed-2 state)

EMDB-37651:
SARS-CoV-2 EG.5.1 spike glycoprotein (closed-1 state)

PDB-8wmd:
Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein (closed-2 state)

PDB-8wmf:
Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein (closed-1 state)

EMDB-34823:
Structure of human SGLT2-MAP17 complex with Phlorizin

PDB-8hin:
Structure of human SGLT2-MAP17 complex with Phlorizin

EMDB-34705:
Structure of human SGLT2-MAP17 complex with Dapagliflozin

EMDB-34737:
Structure of human SGLT2-MAP17 complex with Sotagliflozin

PDB-8hez:
Structure of human SGLT2-MAP17 complex with Dapagliflozin

PDB-8hg7:
Structure of human SGLT2-MAP17 complex with Sotagliflozin

EMDB-34673:
Structure of human SGLT2-MAP17 complex with Canagliflozin

PDB-8hdh:
Structure of human SGLT2-MAP17 complex with Canagliflozin

EMDB-34610:
Structure of human SGLT2-MAP17 complex with TA1887

PDB-8hb0:
Structure of human SGLT2-MAP17 complex with TA1887

EMDB-34530:
Membrane protein A

EMDB-34531:
Membrane protein B

EMDB-35713:
Cryo-EM structure of the potassium-selective channelrhodopsin HcKCR1 H225F mutant in lipid nanodisc

PDB-8h86:
Cryo-EM structure of the potassium-selective channelrhodopsin HcKCR1 in lipid nanodisc

PDB-8h87:
Cryo-EM structure of the potassium-selective channelrhodopsin HcKCR2 in lipid nanodisc

PDB-8iu0:
Cryo-EM structure of the potassium-selective channelrhodopsin HcKCR1 H225F mutant in lipid nanodisc

EMDB-35351:
Cryo-EM structure of CXCL8 bound C-X-C chemokine receptor 1 in complex with Gi heterotrimer

PDB-8ic0:
Cryo-EM structure of CXCL8 bound C-X-C chemokine receptor 1 in complex with Gi heterotrimer

EMDB-34588:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (3.2 angstrom resolution)

EMDB-34589:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (3.9 angstrom resolution)

EMDB-34590:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 4 (3.9 angstrom resolution)

EMDB-34591:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (4.7 angstrom resolution)

EMDB-34592:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (4.8 angstrom resolution)

EMDB-34593:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 3

EMDB-34594:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 4 (4.5 angstrom resolution)

EMDB-34595:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 1

EMDB-34596:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 2

EMDB-34597:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 3

PDB-8hag:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (3.2 angstrom resolution)

PDB-8hah:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (3.9 angstrom resolution)

PDB-8hai:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (4.7 angstrom resolution)

PDB-8haj:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (4.8 angstrom resolution)

PDB-8hak:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 4 (4.5 angstrom resolution)

PDB-8hal:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 1

PDB-8ham:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 2

PDB-8han:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 3

EMDB-16304:
In situ outer dynein arm from Chlamydomonas reinhardtii in a pre-power stroke state

EMDB-16312:
In situ outer dynein arm from Chlamydomonas reinhardtii in the post-power stroke state

PDB-8bwy:
In situ outer dynein arm from Chlamydomonas reinhardtii in a pre-power stroke state

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more