[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,192 items for (author: lian & p)

EMDB-18313:
Retron-Eco1 filament with ADP-ribosylated Effector (local map with 1 segment)
Method: single particle / : Carabias del Rey A, Montoya G

EMDB-18314:
Retron-Eco1 filament with inactive effector (E106A, 2 segments)
Method: single particle / : Carabias del Rey A, Montoya G

EMDB-18315:
Retron-Eco1 filament with ADP-ribosylated Effector (full map with 2 segments)
Method: single particle / : Carabias del Rey A, Montoya G

EMDB-18317:
Retron-Eco1 filament (2 segments)
Method: single particle / : Carabias del Rey A, Montoya G

EMDB-19792:
Retron-Eco1 -1 turn mutant filament with ADP-ribosylated Effector (Consensus refinement)
Method: single particle / : Carabias del Rey A, Montoya G, Pape T

EMDB-19793:
Retron-Eco1 filament with ADP-ribosylated Effector (Consensus refinement)
Method: single particle / : Carabias del Rey A, Montoya G

PDB-8qbk:
Retron-Eco1 filament with ADP-ribosylated Effector (local map with 1 segment)
Method: single particle / : Carabias del Rey A, Montoya G

PDB-8qbl:
Retron-Eco1 filament with inactive effector (E106A, 2 segments)
Method: single particle / : Carabias del Rey A, Montoya G

PDB-8qbm:
Retron-Eco1 filament with ADP-ribosylated Effector (full map with 2 segments)
Method: single particle / : Carabias del Rey A, Montoya G

EMDB-19109:
Structure of XPD stalled at a Y-fork DNA containing a interstrand crosslink
Method: single particle / : Kuper J, Hove T, Kisker C

PDB-8rev:
Structure of XPD stalled at a Y-fork DNA containing a interstrand crosslink
Method: single particle / : Kuper J, Hove T, Kisker C

EMDB-39920:
SARS-CoV-2 Omicron BA.2 spike trimer (6P) in complex with D1F6 Fab, head-to-head aggregate
Method: single particle / : Liu B, Gao X, Li Z, Chen Q, He J, Xiong X

EMDB-39924:
SARS-CoV-2 Omicron BA.4 spike trimer (6P) in complex with D1F6 Fab, head-to-head aggregate
Method: single particle / : Liu B, Gao X, Li Z, Chen Q, He J, Xiong X

PDB-8zc2:
SARS-CoV-2 Omicron BA.2 spike trimer (6P) in complex with D1F6 Fab, head-to-head aggregate
Method: single particle / : Liu B, Gao X, Li Z, Chen Q, He J, Xiong X

PDB-8zc6:
SARS-CoV-2 Omicron BA.4 spike trimer (6P) in complex with D1F6 Fab, head-to-head aggregate
Method: single particle / : Liu B, Gao X, Li Z, Chen Q, He J, Xiong X

EMDB-42676:
5-HT2AR bound to Lisuride in complex with a mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Barros-Alvarez X, Kim K, Panova O, Roth BL, Skiniotis G

EMDB-42999:
5HT2AR-miniGq heterotrimer in complex with a novel agonist obtained from large scale docking
Method: single particle / : Gumpper RH, Wang L, Kapolka N, Skiniotis G, Roth BL

PDB-8uwl:
5-HT2AR bound to Lisuride in complex with a mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Barros-Alvarez X, Kim K, Panova O, Roth BL, Skiniotis G

PDB-8v6u:
5HT2AR-miniGq heterotrimer in complex with a novel agonist obtained from large scale docking
Method: single particle / : Gumpper RH, Wang L, Kapolka N, Skiniotis G, Roth BL

EMDB-36987:
Structure of CUL3-RBX1-KLHL22 complex without CUL3 NA motif
Method: single particle / : Wang W, Ling L, Dai Z, Zuo P, Yin Y

PDB-8k9i:
Structure of CUL3-RBX1-KLHL22 complex without CUL3 NA motif
Method: single particle / : Wang W, Ling L, Dai Z, Zuo P, Yin Y

EMDB-40825:
10E8-GT10.2 immunogen in complex with human Fab 10E8 and mouse Fab W6-10
Method: single particle / : Huang J, Ozorowski G, Ward AB

PDB-8sx3:
10E8-GT10.2 immunogen in complex with human Fab 10E8 and mouse Fab W6-10
Method: single particle / : Huang J, Ozorowski G, Ward AB

EMDB-40815:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies C3V5, V1V3, N611 and base from participant 017
Method: single particle / : Karlinsey D, Ozorowski G, Ward AB

EMDB-40816:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies gp41-N611/FP and base from participant 03
Method: single particle / : Karlinsey D, Ozorowski G, Ward AB

EMDB-40817:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies gp41-N611/FP and base from participant 07
Method: single particle / : Karlinsey D, Ozorowski G, Ward AB

EMDB-40818:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies gp120-GH and base from participant 09
Method: single particle / : Karlinsey D, Ozorowski G, Ward AB

EMDB-40819:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies C3V5, V1V3, gp41-GH/FP and base from participant 11
Method: single particle / : Karlinsey D, Ozorowski G, Ward AB

EMDB-41514:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 1-1 week 0
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41515:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 1-1 at week 4
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41516:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 1-1 at week 16
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41517:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 1-1 at week 20
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41518:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 1-2 at week 0
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41519:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 2-1 at week 4
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41520:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 1-2 at week 16
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41521:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 1-2 at week 20
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41522:
Polyclonal immune complex of fab binding the H2 HA from serum of subject 1-3 at week 20
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41541:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 3-3 at week 0
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41543:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 3-3 at week 16
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41544:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 3-3 at week 20
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41545:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-1 at week 0
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41546:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-1 at week 4
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41547:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-1 at week 16
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41548:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-1 at week 20
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41549:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-2 at week 0
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41550:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-2 at week 4
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41551:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-2 at week 16
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41552:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-2 at week 20
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41553:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-3 at week 0
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41554:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-3 at week 4
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more