[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 93 items for (author: boudker & o)

EMDB-29883:
CLC-ec1 E202Y at pH 4.5 100mM Cl Turn
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

EMDB-29884:
CLC-ec1 R230C/L249C/C85A at pH 4.5 100mM Cl Swap
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

EMDB-29885:
CLC-ec1 R230C/L249C/C85A at pH 4.5 100mM Cl Turn
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

EMDB-29890:
CLC-ec1 L25C/A450C/C85A at pH 4.5 100mM Cl Intermediate
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

EMDB-29899:
CLC-ec1 L25C/A450C/C85A at pH 4.5 100mM Cl Twist
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

PDB-8ga0:
CLC-ec1 E202Y at pH 4.5 100mM Cl Turn
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

PDB-8ga1:
CLC-ec1 R230C/L249C/C85A at pH 4.5 100mM Cl Swap
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

PDB-8ga3:
CLC-ec1 R230C/L249C/C85A at pH 4.5 100mM Cl Turn
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

PDB-8ga5:
CLC-ec1 L25C/A450C/C85A at pH 4.5 100mM Cl Intermediate
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

PDB-8gah:
CLC-ec1 L25C/A450C/C85A at pH 4.5 100mM Cl Twist
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

EMDB-26980:
Human excitatory amino acid transporter 3 in inward facing state in 100 mM L-glutamate
Method: single particle / : Qiu B, Boudker O

EMDB-26985:
Human excitatory amino acid transporter 3 (EAAT3) with bound glutamate in an intermediate outward facing state
Method: single particle / : Qiu B, Boudker O

EMDB-26986:
Human excitatory amino acid transporter 3 (EAAT3) protomer with bound glutamate in an outward facing state
Method: single particle / : Qiu B, Boudker O

EMDB-26997:
Human excitatory amino acid transporter 3 (EAAT3) with bound potassium in an intermediate outward facing state
Method: single particle / : Qiu B, Boudker O

EMDB-26998:
Human excitatory amino acid transporter 3 (EAAT3) protomer in an outward facing apo state in 300 mM KCl
Method: single particle / : Qiu B, Boudker O

EMDB-27000:
Human excitatory amino acid transporter 3 (EAAT3) in an intermediate outward facing apo state
Method: single particle / : Qiu B, Boudker O

EMDB-27001:
Human excitatory amino acid transporter 3 (EAAT3) protomer in an outward facing apo state in 150 mM NMDG-Cl
Method: single particle / : Qiu B, Boudker O

EMDB-27006:
Human excitatory amino acid transporter 3 (EAAT3) in an outward facing sodium-bound state
Method: single particle / : Qiu B, Boudker O

EMDB-27007:
Human Excitatory excitatory amino acid transporter 3 (EAAT3) protomer at in an intermediate outward facing sodium-bound state
Method: single particle / : Qiu B, Boudker O

PDB-8ctc:
Human excitatory amino acid transporter 3 (EAAT3) with bound glutamate in an intermediate outward facing state
Method: single particle / : Qiu B, Boudker O

PDB-8ctd:
Human excitatory amino acid transporter 3 (EAAT3) protomer with bound glutamate in an outward facing state
Method: single particle / : Qiu B, Boudker O

PDB-8cua:
Human excitatory amino acid transporter 3 (EAAT3) with bound potassium in an intermediate outward facing state
Method: single particle / : Qiu B, Boudker O

PDB-8cud:
Human excitatory amino acid transporter 3 (EAAT3) protomer in an outward facing apo state in 300 mM KCl
Method: single particle / : Qiu B, Boudker O

PDB-8cui:
Human excitatory amino acid transporter 3 (EAAT3) in an intermediate outward facing apo state
Method: single particle / : Qiu B, Boudker O

PDB-8cuj:
Human excitatory amino acid transporter 3 (EAAT3) protomer in an outward facing apo state in 150 mM NMDG-Cl
Method: single particle / : Qiu B, Boudker O

PDB-8cv2:
Human excitatory amino acid transporter 3 (EAAT3) in an outward facing sodium-bound state
Method: single particle / : Qiu B, Boudker O

PDB-8cv3:
Human Excitatory excitatory amino acid transporter 3 (EAAT3) protomer at in an intermediate outward facing sodium-bound state
Method: single particle / : Qiu B, Boudker O

EMDB-29514:
Asp-bound GltPh RSMR mutant in IFS-A3 state
Method: single particle / : Huang Y, Boudker O

EMDB-29522:
Asp-bound GltPh RSMR mutant in IFS-A4 state
Method: single particle / : Huang Y, Boudker O

EMDB-29542:
4 degree_iOFS
Method: single particle / : Huang Y, Boudker O

EMDB-29543:
4 degree_IFS-B1;
Method: single particle / : Huang Y, Boudker O

EMDB-29544:
4 degree_IFS-A1
Method: single particle / : Huang Y, Boudker O

EMDB-29545:
4 degree_IFS-A2
Method: single particle / : Huang Y, Boudker O

EMDB-26497:
Asp-bound GltPh RSMR mutant in IFS-A2 state
Method: single particle / : Huang Y, Boudker O

EMDB-26498:
Asp-bound GltPh RSMR mutant in IFS-B1 state
Method: single particle / : Huang Y, Boudker O

PDB-7ugv:
Asp-bound GltPh RSMR mutant in IFS-A2 state
Method: single particle / : Huang Y, Boudker O

PDB-7ugx:
Asp-bound GltPh RSMR mutant in IFS-B1 state
Method: single particle / : Huang Y, Boudker O

EMDB-26482:
TBOA-bound GltPh RSMR mutant in IFS state
Method: single particle / : Huang Y, Boudker O

EMDB-26487:
Asp-bound GltPh RSMR mutant in IFS-A1 state
Method: single particle / : Huang Y, Boudker O

EMDB-26489:
TBOA-bound GltPh RSMR mutant in OFS state
Method: single particle / : Huang Y, Boudker O

EMDB-26504:
Asp-bound GltPh RSMR mutant in iOFS state
Method: single particle / : Huang Y, Boudker O

EMDB-26505:
Asp-bound GltPh RSMR mutant in IFS-B2 state
Method: single particle / : Huang Y, Boudker O

PDB-7ug0:
TBOA-bound GltPh RSMR mutant in IFS state
Method: single particle / : Huang Y, Boudker O

PDB-7ugd:
Asp-bound GltPh RSMR mutant in IFS-A1 state
Method: single particle / : Huang Y, Boudker O

PDB-7ugj:
TBOA-bound GltPh RSMR mutant in OFS state
Method: single particle / : Huang Y, Boudker O

PDB-7uh3:
Asp-bound GltPh RSMR mutant in iOFS state
Method: single particle / : Huang Y, Boudker O

PDB-7uh6:
Asp-bound GltPh RSMR mutant in IFS-B2 state
Method: single particle / : Huang Y, Boudker O

EMDB-24241:
CLC-ec1 at pH 4.5 100mM Cl Swap
Method: single particle / : Fortea E, Boudker O, Accardi A

EMDB-24263:
CLC-ec1 pH 4.5 100mM Cl Twist1
Method: single particle / : Fortea E, Boudker O, Accardi A

EMDB-24582:
CLC-ec1 at pH 7.5 100mM Cl Swap
Method: single particle / : Fortea E, Boudker O, Accardi A

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more