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MDQ

Summary
Name:2'-deoxy-3-(oxidomethyl)cytidine 5'-(dihydrogen phosphate)
Formula:C10 H16 N3 O8 P
Formal charge:0
Formula weight:337.223 Da
Component type:DNA linking

Chemical Identifiers

ProgramVersionName
ACDLabs12.012'-deoxy-3-(oxidomethyl)cytidine 5'-(dihydrogen phosphate)
OpenEye OEToolkits1.7.0[6-azanyl-3-[(2R,4S,5R)-4-hydroxy-5-(phosphonooxymethyl)oxolan-2-yl]-2-oxo-pyrimidin-1-ium-1-yl]methanolate

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs12.01O=P(O)(O)OCC2OC(N1C(=O)[N+](=C(N)C=C1)C[O-])CC2O
SMILES_CANONICALCACTVS3.370NC1=[N+](C[O-])C(=O)N(C=C1)[C@H]2C[C@H](O)[C@@H](CO[P](O)(O)=O)O2
SMILESCACTVS3.370NC1=[N+](C[O-])C(=O)N(C=C1)[CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2
SMILES_CANONICALOpenEye OEToolkits1.7.0C1[C@@H]([C@H](O[C@H]1N2C=CC(=[N+](C2=O)C[O-])N)COP(=O)(O)O)O
SMILESOpenEye OEToolkits1.7.0C1C(C(OC1N2C=CC(=[N+](C2=O)C[O-])N)COP(=O)(O)O)O
InChIInChI1.03InChI=1S/C10H15N3O8P/c11-8-1-2-12(10(16)13(8)5-14)9-3-6(15)7(21-9)4-20-22(17,18)19/h1-2,6-7,9,11,15H,3-5H2,(H2,17,18,19)/q-1/p+1/t6-,7+,9+/m0/s1
InChIKeyInChI1.03BDBXEKDYKCTPAE-LKEWCRSYSA-O

223532

PDB entries from 2024-08-07

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