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C5L

Summary
Name:2'-O-(2-methoxyethyl)-5-methylcytidine 5'-(dihydrogen phosphate)
Formula:C13 H22 N3 O9 P
Formal charge:0
Formula weight:395.302 Da
Component type:RNA LINKING

Chemical Identifiers

ProgramVersionName
ACDLabs12.012'-O-(2-methoxyethyl)-5-methylcytidine 5'-(dihydrogen phosphate)
OpenEye OEToolkits1.7.6[(2R,3R,4R,5R)-5-(4-azanyl-5-methyl-2-oxidanylidene-pyrimidin-1-yl)-4-(2-methoxyethoxy)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs12.01O=P(O)(O)OCC2OC(N1C(=O)N=C(N)C(=C1)C)C(OCCOC)C2O
InChIInChI1.03InChI=1S/C13H22N3O9P/c1-7-5-16(13(18)15-11(7)14)12-10(23-4-3-22-2)9(17)8(25-12)6-24-26(19,20)21/h5,8-10,12,17H,3-4,6H2,1-2H3,(H2,14,15,18)(H2,19,20,21)/t8-,9-,10-,12-/m1/s1
InChIKeyInChI1.03RRWZBUGVTSQGAI-DNRKLUKYSA-N
SMILES_CANONICALCACTVS3.370COCCO[C@@H]1[C@H](O)[C@@H](CO[P](O)(O)=O)O[C@H]1N2C=C(C)C(=NC2=O)N
SMILESCACTVS3.370COCCO[CH]1[CH](O)[CH](CO[P](O)(O)=O)O[CH]1N2C=C(C)C(=NC2=O)N
SMILES_CANONICALOpenEye OEToolkits1.7.6CC1=CN(C(=O)N=C1N)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)OCCOC
SMILESOpenEye OEToolkits1.7.6CC1=CN(C(=O)N=C1N)C2C(C(C(O2)COP(=O)(O)O)O)OCCOC

218500

PDB entries from 2024-04-17

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