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ZZC

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2doub1.32Å1.35ÅAromatic
N1C6sing1.33Å1.36ÅAromatic
C2N3sing1.32Å1.35ÅAromatic
N3C4doub1.33Å1.34ÅAromatic
C4C5sing1.41Å1.46ÅAromatic
C4N9sing1.37Å1.32ÅAromatic
C5C6doub1.41Å1.48ÅAromatic
C5N7sing1.35Å1.33ÅAromatic
C6N6sing1.38Å1.34Å
N7C8doub1.30Å1.36ÅAromatic
C8N9sing1.36Å1.35ÅAromatic
N9C1'sing1.46Å1.47Å
PAO1Adoub1.55Å1.50Å
PAO2Asing1.54Å1.51Å
PAO3Asing1.61Å1.61Å
PAO5'sing1.61Å1.57Å
PBO5'Asing1.61Å1.60Å
PBO1Bsing1.54Å1.50Å
PBO2Bdoub1.55Å1.50Å
PBO3Asing1.61Å1.62Å
C1'AC2'Asing1.51Å1.50Å
C2'AC3'Asing1.51Å1.51Å
C2'AO2'Adoub1.21Å1.22Å
C3'AC4'Asing1.53Å1.53Å
C3'AO3'Asing1.43Å1.42Å
C4'AC5'Asing1.53Å1.52Å
C4'AO4'Asing1.43Å1.42Å
C5'AO5'Asing1.43Å1.41Å
C1'C2'sing1.55Å1.52Å
C1'O4'sing1.44Å1.43Å
C2'O2'sing1.43Å1.42Å
C2'C3'sing1.55Å1.52Å
C3'O3'sing1.43Å1.43Å
C3'C4'sing1.54Å1.53Å
C4'O4'sing1.44Å1.41Å
C4'C5'sing1.53Å1.50Å
C5'O5'sing1.43Å1.38Å
C2H2sing1.08Å1.08Å
N6HN6sing0.97Å1.00Å
N6HN6Asing0.97Å1.00Å
C8H8sing1.08Å1.08Å
C1'AH1'Asing1.09Å1.10Å
C1'AH1'Bsing1.09Å1.10Å
C1'AH1'Csing1.09Å1.10Å
C3'AH3'Asing1.09Å1.10Å
C4'AH4'Asing1.09Å1.10Å
C5'AH5'Asing1.09Å1.10Å
C5'AH5'Bsing1.09Å1.10Å
O3'AH3'Bsing0.97Å0.95Å
O4'AH4'Bsing0.97Å0.95Å
C1'H1'sing1.09Å1.10Å
C2'H2'sing1.09Å1.10Å
O2'HO2'sing0.97Å0.95Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C4'H4'sing1.09Å1.10Å
C5'H5'sing1.09Å1.10Å
C5'H5'Csing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C6121.1°121.2°
N1C2N3123.0°122.4°
N1C2H2118.5°118.8°
N1C6C5118.4°118.4°
N1C6N6122.5°120.8°
C2N3C4121.3°120.7°
N3C2H2118.5°118.8°
N3C4C5119.2°119.1°
N3C4N9134.3°134.9°
C5C4N9106.5°106.0°
C4C5C6116.9°118.2°
C4C5N7107.0°107.2°
C4N9C8108.5°107.4°
C4N9C1'122.0°126.3°
C6C5N7136.1°134.7°
C5C6N6119.1°120.8°
C5N7C8107.2°109.4°
C6N6HN6109.5°120.0°
C6N6HN6A109.4°120.0°
N7C8N9110.8°110.0°
N7C8H8124.6°125.0°
C8N9C1'129.4°126.3°
N9C8H8124.6°125.0°
N9C1'C2'109.6°110.6°
N9C1'O4'115.8°110.6°
N9C1'H1'104.4°110.5°
O1APAO2A121.5°109.4°
O1APAO3A110.5°109.4°
O1APAO5'109.8°109.5°
O2APAO3A105.5°109.5°
O2APAO5'110.1°109.5°
O3APAO5'96.7°109.5°
PAO3APB125.0°134.0°
PAO5'C5'111.0°123.0°
O5'APBO1B110.4°109.5°
O5'APBO2B107.1°109.5°
O5'APBO3A97.7°109.4°
PBO5'AC5'A120.2°123.0°
O1BPBO2B120.4°109.5°
O1BPBO3A115.8°109.5°
O2BPBO3A102.6°109.5°
C1'AC2'AC3'A119.5°120.0°
C1'AC2'AO2'A121.2°120.0°
C2'AC1'AH1'A109.5°109.5°
C2'AC1'AH1'B109.4°109.5°
C2'AC1'AH1'C109.5°109.5°
C3'AC2'AO2'A119.3°120.0°
C2'AC3'AC4'A113.4°109.5°
C2'AC3'AO3'A108.2°109.4°
C2'AC3'AH3'A106.8°109.5°
C4'AC3'AO3'A106.3°109.5°
C3'AC4'AC5'A115.7°109.5°
C3'AC4'AO4'A109.7°109.5°
C4'AC3'AH3'A108.6°109.5°
C3'AC4'AH4'A104.3°109.5°
O3'AC3'AH3'A113.8°109.5°
C3'AO3'AH3'B109.5°114.0°
C5'AC4'AO4'A107.4°109.4°
C4'AC5'AO5'A108.5°109.5°
C5'AC4'AH4'A106.7°109.5°
C4'AC5'AH5'A109.8°109.5°
C4'AC5'AH5'B110.0°109.5°
O4'AC4'AH4'A113.1°109.5°
C4'AO4'AH4'B109.5°114.0°
O5'AC5'AH5'A109.8°109.5°
O5'AC5'AH5'B110.0°109.5°
C2'C1'O4'107.9°103.5°
C1'C2'O2'110.6°110.9°
C1'C2'C3'101.9°102.1°
C2'C1'H1'112.9°110.6°
C1'C2'H2'115.6°110.9°
C1'O4'C4'108.2°107.0°
O4'C1'H1'106.3°110.8°
O2'C2'C3'114.8°110.9°
O2'C2'H2'103.0°110.8°
C2'O2'HO2'109.5°114.0°
C2'C3'O3'111.6°110.5°
C2'C3'C4'100.1°104.2°
C3'C2'H2'111.5°110.9°
C2'C3'H3'115.3°110.5°
O3'C3'C4'112.7°110.5°
O3'C3'H3'103.3°110.4°
C3'O3'HO3'109.5°114.0°
C3'C4'O4'107.1°107.3°
C3'C4'C5'110.3°109.9°
C4'C3'H3'114.2°110.6°
C3'C4'H4'107.4°109.9°
O4'C4'C5'97.6°109.9°
O4'C4'H4'118.4°109.8°
C4'C5'O5'111.8°109.5°
C5'C4'H4'115.6°110.0°
C4'C5'H5'108.7°109.4°
C4'C5'H5'C108.2°109.5°
O5'C5'H5'108.7°109.5°
O5'C5'H5'C108.2°109.5°
HN6N6HN6A109.5°120.0°
H1'AC1'AH1'B109.4°109.5°
H1'AC1'AH1'C109.5°109.5°
H1'BC1'AH1'C109.5°109.4°
H5'AC5'AH5'B108.7°109.5°
H5'C5'H5'C111.3°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1C2N3H2180.0°180.0°
N1C2N3C40.7°0.0°
C2N1C6C51.3°0.0°
C2N1C6N6179.8°180.0°
C6N1C2N30.5°0.0°
N1C6C5C41.1°0.0°
N1C6C5N6178.9°180.0°
N1C6C5N7179.9°180.0°
C6N1C2H2179.5°180.0°
N1C6N6HN6155.9°0.0°
N1C6N6HN6A35.9°180.0°
C2N3C4C50.8°0.1°
C2N3C4N9179.9°180.0°
N3C4C5N9179.4°180.0°
N3C4C5C60.1°0.0°
N3C4C5N7179.4°180.0°
N3C4N9C8179.8°180.0°
N3C4N9C1'2.6°0.0°
C4N3C2H2179.3°180.0°
C4C5C6N7179.0°180.0°
C4C5C6N6179.9°180.0°
C4C5N7C80.5°0.0°
C5C4N9C80.6°0.0°
C5C4N9C1'178.2°180.0°
N9C4C5C6179.3°180.0°
N9C4C5N70.0°0.0°
C4N9C8N70.9°0.0°
C4N9C8C1'177.4°180.0°
C4N9C1'C2'117.5°85.0°
C4N9C1'O4'120.2°160.9°
C4N9C8H8179.1°180.0°
C4N9C1'H1'3.7°37.8°
C6C5N7C8179.6°180.0°
C5C6N6HN623.0°180.0°
C5C6N6HN6A143.0°0.0°
N7C5C6N61.0°0.0°
C5N7C8N90.9°0.0°
C5N7C8H8179.1°180.0°
C6N6HN6HN6A120.0°180.0°
N7C8N9H8180.0°180.0°
N7C8N9C1'178.3°180.0°
C8N9C1'C2'59.6°95.0°
C8N9C1'O4'62.8°19.1°
C8N9C1'H1'179.2°142.2°
N9C1'C2'O4'127.0°118.5°
N9C1'C2'H1'115.9°122.8°
N9C1'O4'H1'115.4°123.0°
N9C1'C2'O2'85.0°86.3°
N9C1'C2'C3'152.5°155.5°
N9C1'O4'C4'126.2°158.5°
C1'N9C8H81.7°0.0°
N9C1'C2'H2'31.5°37.3°
O1APAO2AO3A126.5°120.0°
O1APAO2AO5'130.2°120.0°
O1APAO3AO5'114.0°120.0°
O1APAO3APB52.9°40.0°
O1APAO5'C5'57.2°55.0°
O2APAO3AO5'113.0°120.1°
O2APAO3APB174.1°80.0°
O2APAO5'C5'79.0°64.9°
PAO3APBO5'A134.8°160.0°
PAO3APBO1B17.6°80.0°
PAO3APBO2B115.6°40.0°
O3APAO5'C5'171.8°175.0°
O5'PAO3APB61.1°160.0°
PAO5'C5'C4'123.9°180.0°
PAO5'C5'H5'4.0°60.0°
PAO5'C5'H5'C117.1°60.1°
O5'APBO1BO2B125.7°120.0°
O5'APBO1BO3A109.8°120.0°
O5'APBO2BO3A102.3°120.0°
PBO5'AC5'AC4'A174.6°180.0°
PBO5'AC5'AH5'A65.4°60.0°
PBO5'AC5'AH5'B54.2°60.0°
O1BPBO2BO3A130.5°120.1°
O1BPBO5'AC5'A37.3°65.0°
O2BPBO5'AC5'A170.2°55.0°
O3APBO5'AC5'A84.0°175.0°
C1'AC2'AC3'AO2'A180.0°180.0°
C1'AC2'AC3'AC4'A159.4°80.0°
C1'AC2'AC3'AO3'A41.7°160.0°
C2'AC1'AH1'AH1'B120.0°120.0°
C2'AC1'AH1'AH1'C120.0°120.1°
C2'AC1'AH1'BH1'C120.0°120.1°
C1'AC2'AC3'AH3'A81.1°40.0°
C2'AC3'AC4'AO3'A118.7°119.9°
C2'AC3'AC4'AH3'A118.5°120.0°
C2'AC3'AO3'AH3'A118.4°120.0°
C2'AC3'AC4'AC5'A57.1°180.0°
C2'AC3'AC4'AO4'A64.5°60.1°
C3'AC2'AC1'AH1'A89.6°90.0°
C3'AC2'AC1'AH1'B150.4°150.0°
C3'AC2'AC1'AH1'C30.4°30.0°
C2'AC3'AC4'AH4'A174.1°60.0°
C2'AC3'AO3'AH3'B20.5°60.0°
O2'AC2'AC3'AC4'A20.7°100.0°
O2'AC2'AC3'AO3'A138.3°20.0°
O2'AC2'AC1'AH1'A90.4°90.0°
O2'AC2'AC1'AH1'B29.5°30.0°
O2'AC2'AC1'AH1'C149.6°150.0°
O2'AC2'AC3'AH3'A98.9°140.0°
C4'AC3'AO3'AH3'A119.5°120.1°
C3'AC4'AC5'AO4'A122.9°119.9°
C3'AC4'AC5'AH4'A115.6°120.1°
C3'AC4'AO4'AH4'A116.0°120.1°
C3'AC4'AC5'AO5'A40.4°175.0°
C3'AC4'AC5'AH5'A79.6°55.0°
C3'AC4'AC5'AH5'B160.7°65.0°
C4'AC3'AO3'AH3'B101.6°59.9°
C3'AC4'AO4'AH4'B159.5°59.9°
O3'AC3'AC4'AC5'A175.8°60.1°
O3'AC3'AC4'AO4'A54.2°180.0°
O3'AC3'AC4'AH4'A67.2°60.0°
C5'AC4'AO4'AH4'A117.5°120.0°
C4'AC5'AO5'AH5'A120.0°120.0°
C4'AC5'AO5'AH5'B120.4°120.0°
C5'AC4'AC3'AH3'A61.4°60.0°
C4'AC5'AH5'AH5'B120.4°120.0°
C5'AC4'AO4'AH4'B33.0°60.0°
O4'AC4'AC5'AO5'A163.2°65.1°
O4'AC4'AC3'AH3'A177.0°60.0°
O4'AC4'AC5'AH5'A43.2°175.0°
O4'AC4'AC5'AH5'B76.4°55.0°
O5'AC5'AC4'AH4'A75.2°54.9°
O5'AC5'AH5'AH5'B120.4°120.0°
C2'C1'O4'H1'121.3°118.6°
C1'C2'O2'C3'114.5°112.7°
C1'C2'O2'H2'124.1°123.7°
C1'C2'C3'H2'123.9°118.2°
C1'C2'C3'O3'83.6°97.8°
C1'C2'C3'C4'36.0°20.9°
C2'C1'O4'C4'2.9°40.0°
C1'C2'O2'HO2'107.7°180.0°
C1'C2'C3'H3'159.0°139.7°
O4'C1'C2'O2'148.0°155.2°
O4'C1'C2'C3'25.6°37.0°
C1'O4'C4'C3'21.4°26.5°
C1'O4'C4'C5'92.6°146.0°
O4'C1'C2'H2'95.5°81.2°
C1'O4'C4'H4'142.8°92.9°
O2'C2'C3'H2'116.6°123.6°
O2'C2'C3'O3'35.9°20.4°
O2'C2'C3'C4'155.5°139.1°
O2'C2'C1'H1'30.9°36.5°
O2'C2'C3'H3'81.5°102.1°
C2'C3'O3'C4'111.8°114.7°
C2'C3'O3'H3'124.5°122.5°
C2'C3'C4'H3'123.8°118.8°
C2'C3'C4'O4'36.4°2.0°
C2'C3'C4'C5'68.7°121.5°
C3'C2'C1'H1'91.5°81.7°
C3'C2'O2'HO2'137.7°67.3°
C2'C3'O3'HO3'53.3°61.5°
C2'C3'C4'H4'164.5°117.4°
O3'C3'C4'H3'117.5°122.6°
O3'C3'C4'O4'82.3°120.7°
O3'C3'C4'C5'172.6°119.9°
O3'C3'C2'H2'152.5°144.0°
O3'C3'C4'H4'45.8°1.3°
C3'C4'O4'C5'114.0°119.5°
C3'C4'O4'H4'121.4°119.4°
C3'C4'C5'H4'122.0°121.1°
C3'C4'C5'O5'104.5°175.0°
C4'C3'C2'H2'87.9°97.3°
C4'C3'O3'HO3'165.0°176.2°
C3'C4'C5'H5'15.4°55.0°
C3'C4'C5'H5'C136.5°65.0°
O4'C4'C5'H4'126.6°121.0°
O4'C4'C5'O5'144.1°67.1°
C4'O4'C1'H1'118.4°78.5°
O4'C4'C3'H3'160.2°116.7°
O4'C4'C5'H5'96.0°172.9°
O4'C4'C5'H5'C25.0°52.9°
C4'C5'O5'H5'120.0°119.9°
C4'C5'O5'H5'C119.0°120.0°
C5'C4'C3'H3'55.1°2.7°
C4'C5'H5'H5'C119.1°120.0°
O5'C5'C4'H4'17.5°53.9°
O5'C5'H5'H5'C119.1°120.0°
H1'AC1'AH1'BH1'C120.0°120.0°
H3'AC3'AC4'AH4'A55.6°180.0°
H3'AC3'AO3'AH3'B138.9°180.0°
H4'AC4'AC5'AH5'A164.8°65.0°
H4'AC4'AC5'AH5'B45.2°175.0°
H4'AC4'AO4'AH4'B84.5°180.0°
H1'C1'C2'H2'147.4°160.1°
H2'C2'O2'HO2'16.4°56.4°
H2'C2'C3'H3'35.1°21.5°
H3'C3'O3'HO3'71.2°61.1°
H3'C3'C4'H4'71.7°123.9°
H4'C4'C5'H5'137.4°66.1°
H4'C4'C5'H5'C101.5°173.9°

222624

PDB entries from 2024-07-17

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