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ZYB

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
FC2sing1.35Å1.34Å
C2C1sing1.39Å1.39ÅAromatic
C2C3doub1.39Å1.39ÅAromatic
C1Cdoub1.38Å1.39ÅAromatic
C3C4sing1.38Å1.39ÅAromatic
C4C5doub1.40Å1.39ÅAromatic
C5Csing1.40Å1.39ÅAromatic
C5C6sing1.48Å1.52Å
C6Nsing1.39Å1.42Å
C6N1doub1.30Å1.42Å
N1Osing1.42Å1.37Å
C1H1sing1.08Å1.08Å
C3H3sing1.08Å1.08Å
CHsing1.08Å1.08Å
C4H4sing1.08Å1.08Å
NHN1sing0.97Å1.00Å
NHN2sing0.97Å1.00Å
OHBsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
FC2C1120.4°119.9°
FC2C3119.7°119.9°
C1C2C3119.9°120.2°
C2C1C120.0°120.1°
C2C1H1120.0°119.9°
C2C3C4120.0°120.1°
C2C3H3120.0°119.9°
C1CC5120.0°119.9°
CC1H1120.0°119.9°
C1CH120.0°120.1°
C3C4C5120.2°119.9°
C4C3H3120.0°119.9°
C3C4H4119.9°120.0°
C4C5C119.9°119.7°
C4C5C6119.6°120.1°
C5C4H4119.9°120.1°
CC5C6120.5°120.1°
C5CH120.0°120.0°
C5C6N110.2°120.0°
C5C6N1112.3°120.0°
NC6N1111.3°120.0°
C6NHN1120.0°120.0°
C6NHN2120.0°120.0°
C6N1O109.0°120.0°
N1OHB109.5°114.0°
HN1NHN2120.0°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
FC2C1C3180.0°179.8°
FC2C1C180.0°180.0°
FC2C3C4179.9°180.0°
FC2C1H10.0°0.0°
FC2C3H30.1°0.0°
C2C1CH1180.0°180.0°
C1C2C3C40.1°0.2°
C2C1CC50.1°0.0°
C1C2C3H3179.9°179.7°
C2C1CH179.9°180.0°
C3C2C1C0.0°0.2°
C2C3C4H3180.0°180.0°
C2C3C4C50.3°0.0°
C3C2C1H1180.0°179.8°
C2C3C4H4179.7°179.9°
C1CC5C40.3°0.2°
C1CC5H180.0°180.0°
C1CC5C6179.0°180.0°
C3C4C5H4180.0°179.9°
C3C4C5C0.4°0.2°
C3C4C5C6179.1°180.0°
C4C5CC6178.7°179.8°
C4C5C6N171.3°180.0°
C4C5C6N164.0°0.1°
C5C4C3H3179.7°180.0°
C4C5CH179.7°179.8°
CC5C6N7.4°0.3°
CC5C6N1117.3°179.7°
C5CC1H1179.8°180.0°
CC5C4H4179.6°179.7°
C5C6NN1125.2°180.0°
C5C6N1O156.5°180.0°
C6C5CH1.0°0.0°
C6C5C4H40.9°0.1°
C5C6NHN1125.2°0.0°
C5C6NHN254.8°179.9°
NC6N1O79.5°0.0°
C6NHN1HN2180.0°179.9°
N1C6NHN10.0°180.0°
N1C6NHN2180.0°0.1°
C6N1OHB180.0°180.0°
H1C1CH0.2°0.0°
H3C3C4H40.3°0.1°

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PDB entries from 2024-07-10

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