ZY9
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | C2 | sing | 1.47Å | 1.47Å | |
| C2 | C7 | sing | 1.51Å | 1.37Å | |
| C6 | C7 | doub | 1.39Å | 1.40Å | Aromatic |
| C6 | C8 | sing | 1.39Å | 1.40Å | Aromatic |
| C7 | N11 | sing | 1.31Å | 1.35Å | Aromatic |
| C8 | C9 | doub | 1.39Å | 1.40Å | Aromatic |
| N11 | CA | doub | 1.33Å | 1.36Å | Aromatic |
| C9 | CA | sing | 1.39Å | 1.41Å | Aromatic |
| CA | C | sing | 1.48Å | 1.41Å | |
| C | O | doub | 1.21Å | 1.24Å | |
| C | OXT | sing | 1.35Å | 1.36Å | |
| C9 | H1 | sing | 1.08Å | 1.08Å | |
| C8 | H6 | sing | 1.08Å | 1.08Å | |
| C6 | H3 | sing | 1.08Å | 1.08Å | |
| C2 | H4 | sing | 1.09Å | 1.10Å | |
| C2 | H5 | sing | 1.09Å | 1.10Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| N | C2 | C7 | 111.2° | 109.5° |
| N | C2 | H4 | 109.1° | 109.5° |
| N | C2 | H5 | 109.0° | 109.5° |
| C2 | N | H | 109.5° | 111.0° |
| C2 | N | H2 | 109.5° | 111.0° |
| C2 | C7 | C6 | 118.8° | 119.6° |
| C2 | C7 | N11 | 122.1° | 119.6° |
| C7 | C2 | H4 | 109.1° | 109.4° |
| C7 | C2 | H5 | 109.1° | 109.5° |
| C7 | C6 | C8 | 120.0° | 119.4° |
| C6 | C7 | N11 | 119.2° | 120.9° |
| C7 | C6 | H3 | 120.0° | 120.3° |
| C6 | C8 | C9 | 119.7° | 118.5° |
| C6 | C8 | H6 | 120.1° | 120.8° |
| C8 | C6 | H3 | 120.0° | 120.3° |
| C7 | N11 | CA | 122.7° | 121.7° |
| C8 | C9 | CA | 118.7° | 119.1° |
| C8 | C9 | H1 | 120.6° | 120.5° |
| C9 | C8 | H6 | 120.1° | 120.7° |
| N11 | CA | C9 | 119.7° | 120.5° |
| N11 | CA | C | 119.1° | 119.8° |
| C9 | CA | C | 121.1° | 119.7° |
| CA | C9 | H1 | 120.6° | 120.4° |
| CA | C | O | 119.9° | 120.0° |
| CA | C | OXT | 115.4° | 120.0° |
| O | C | OXT | 124.5° | 120.0° |
| C | OXT | HXT | 109.5° | 117.0° |
| H4 | C2 | H5 | 109.4° | 109.5° |
| H | N | H2 | 109.5° | 111.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N | C2 | C7 | H4 | 120.3° | 120.0° |
| N | C2 | C7 | H5 | 120.3° | 120.0° |
| N | C2 | C7 | C6 | 163.6° | 95.0° |
| N | C2 | C7 | N11 | 16.6° | 84.7° |
| N | C2 | H4 | H5 | 119.2° | 120.0° |
| C2 | N | H | H2 | 120.0° | 123.9° |
| C2 | C7 | C6 | N11 | 179.8° | 179.7° |
| C2 | C7 | C6 | C8 | 179.7° | 180.0° |
| C2 | C7 | N11 | CA | 178.0° | 179.7° |
| C2 | C7 | C6 | H3 | 0.3° | 0.3° |
| C7 | C2 | H4 | H5 | 119.2° | 120.0° |
| C7 | C2 | N | H | 180.0° | 56.0° |
| C7 | C2 | N | H2 | 60.0° | 180.0° |
| C7 | C6 | C8 | H3 | 180.0° | 179.7° |
| C7 | C6 | C8 | C9 | 0.4° | 0.3° |
| C6 | C7 | N11 | CA | 1.8° | 0.0° |
| C7 | C6 | C8 | H6 | 179.7° | 179.7° |
| C6 | C7 | C2 | H4 | 76.1° | 145.0° |
| C6 | C7 | C2 | H5 | 43.4° | 25.0° |
| C8 | C6 | C7 | N11 | 0.1° | 0.3° |
| C6 | C8 | C9 | H6 | 180.0° | 180.0° |
| C6 | C8 | C9 | CA | 0.8° | 0.0° |
| C6 | C8 | C9 | H1 | 179.2° | 180.0° |
| C7 | N11 | CA | C9 | 2.9° | 0.3° |
| C7 | N11 | CA | C | 179.0° | 180.0° |
| N11 | C7 | C6 | H3 | 179.9° | 180.0° |
| N11 | C7 | C2 | H4 | 103.7° | 35.3° |
| N11 | C7 | C2 | H5 | 136.9° | 155.3° |
| C8 | C9 | CA | N11 | 2.4° | 0.3° |
| C8 | C9 | CA | H1 | 180.0° | 180.0° |
| C8 | C9 | CA | C | 178.3° | 179.9° |
| C9 | C8 | C6 | H3 | 179.6° | 180.0° |
| N11 | CA | C9 | C | 176.0° | 179.7° |
| N11 | CA | C | O | 173.0° | 180.0° |
| N11 | CA | C | OXT | 3.5° | 0.3° |
| N11 | CA | C9 | H1 | 177.6° | 179.7° |
| C9 | CA | C | O | 2.9° | 0.3° |
| C9 | CA | C | OXT | 179.5° | 180.0° |
| CA | C9 | C8 | H6 | 179.2° | 180.0° |
| CA | C | O | OXT | 176.2° | 179.7° |
| C | CA | C9 | H1 | 1.7° | 0.0° |
| CA | C | OXT | HXT | 176.4° | 179.6° |
| O | C | OXT | HXT | 0.0° | 0.0° |
| H1 | C9 | C8 | H6 | 0.8° | 0.0° |
| H6 | C8 | C6 | H3 | 0.4° | 0.0° |
| H4 | C2 | N | H | 59.7° | 64.0° |
| H4 | C2 | N | H2 | 60.3° | 60.0° |
| H5 | C2 | N | H | 59.7° | 176.0° |
| H5 | C2 | N | H2 | 179.7° | 60.0° |
