Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

ZXW

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2doub1.32Å1.32ÅAromatic
N1C6sing1.33Å1.31ÅAromatic
N6C6sing1.38Å1.31Å
C2N3sing1.32Å1.31ÅAromatic
C6C5doub1.40Å1.47ÅAromatic
N3C4doub1.33Å1.33ÅAromatic
C5C4sing1.40Å1.44ÅAromatic
C5N7sing1.36Å1.32ÅAromatic
C4N9sing1.37Å1.30ÅAromatic
O4'C1'sing1.44Å1.39Å
O4'C4'sing1.44Å1.40Å
N7C8doub1.30Å1.32ÅAromatic
O2APAdoub1.48Å1.43Å
N9C8sing1.36Å1.31ÅAromatic
N9C1'sing1.47Å1.45Å
O1APAsing1.61Å1.44Å
C5'O5'sing1.43Å1.41Å
C5'C4'sing1.53Å1.52Å
C1'C2'sing1.54Å1.50Å
O5'PAsing1.61Å1.57Å
C4'C3'sing1.54Å1.49Å
PAO3Asing1.61Å1.60Å
C2'C3'sing1.54Å1.50Å
C2'O2'sing1.43Å1.41Å
C3'O3'sing1.43Å1.41Å
O3APBsing1.61Å1.58Å
O3BPBsing1.61Å1.55Å
O3BPGsing1.61Å1.55Å
PBO1Bdoub1.48Å1.48Å
PBO2Bsing1.61Å1.43Å
O1GPGdoub1.48Å1.49Å
PGO3Gsing1.61Å1.49Å
PGS2Gsing2.12Å2.01Å
S2GC32sing1.81Å1.76Å
C32C33sing1.51Å1.51Å
O35C33doub1.21Å1.20Å
C33N34sing1.35Å1.30Å
N34CBsing1.46Å1.44Å
OCdoub1.21Å1.19Å
CBCAsing1.53Å1.52Å
NCAsing1.47Å1.45Å
CCAsing1.51Å1.52Å
NHsing1.01Å1.00Å
NH2sing1.01Å1.00Å
CAHAsing1.09Å1.10Å
CBH5sing1.09Å1.10Å
CBH6sing1.09Å1.10Å
O1AH7sing0.97Å0.95Å
O2BH8sing0.97Å0.95Å
O3GH9sing0.97Å0.95Å
C32H10sing1.09Å1.10Å
C32H11sing1.09Å1.10Å
N34H12sing0.97Å1.00Å
C5'H13sing1.09Å1.10Å
C5'H14sing1.09Å1.10Å
C4'H15sing1.09Å1.10Å
C1'H16sing1.09Å1.10Å
C2'H17sing1.09Å1.10Å
O2'H18sing0.97Å0.95Å
C3'H19sing1.09Å1.10Å
O3'H20sing0.97Å0.95Å
C8H21sing1.08Å1.08Å
N6H22sing0.97Å1.00Å
N6H23sing0.97Å1.00Å
C2H24sing1.08Å1.08Å
COXTsing1.34Å45.93Å
OXTHXTsing0.97Å0.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C6122.1°121.2°
N1C2N3123.8°122.4°
N1C2H24118.1°118.8°
N1C6N6119.6°120.8°
N1C6C5117.9°118.4°
N6C6C5122.5°120.8°
C6N6H22109.5°120.0°
C6N6H23109.4°120.0°
C2N3C4120.6°120.6°
N3C2H24118.1°118.8°
C6C5C4116.2°118.2°
C6C5N7137.7°134.6°
N3C4C5119.4°119.1°
N3C4N9134.3°134.9°
C4C5N7106.1°107.2°
C5C4N9106.3°106.0°
C5N7C8107.5°109.4°
C4N9C8108.8°107.4°
C4N9C1'123.2°126.3°
C1'O4'C4'110.8°105.3°
O4'C1'N9108.0°110.3°
O4'C1'C2'108.0°104.8°
O4'C1'H16110.9°110.4°
O4'C4'C5'115.0°110.4°
O4'C4'C3'106.5°104.8°
O4'C4'H15108.9°110.5°
N7C8N9111.4°110.0°
N7C8H21124.3°125.0°
O2APAO1A105.3°109.5°
O2APAO5'110.7°109.5°
O2APAO3A118.9°109.5°
C8N9C1'128.0°126.3°
N9C8H21124.3°125.0°
N9C1'C2'110.5°110.4°
N9C1'H16110.0°110.4°
O1APAO5'111.7°109.5°
O1APAO3A94.2°109.5°
PAO1AH7109.5°113.9°
O5'C5'C4'110.9°109.5°
C5'O5'PA125.0°123.0°
O5'C5'H13109.1°109.4°
O5'C5'H14109.1°109.5°
C5'C4'C3'110.9°110.4°
C4'C5'H13109.1°109.5°
C4'C5'H14109.1°109.5°
C5'C4'H15107.5°110.3°
C1'C2'C3'105.0°104.1°
C1'C2'O2'109.9°110.5°
C2'C1'H16109.4°110.4°
C1'C2'H17108.9°110.5°
O5'PAO3A114.4°109.5°
C4'C3'C2'105.6°104.1°
C4'C3'O3'106.0°110.5°
C3'C4'H15107.8°110.4°
C4'C3'H19110.1°110.5°
PAO3APB122.3°134.0°
C3'C2'O2'113.9°110.5°
C2'C3'O3'113.6°110.5°
C3'C2'H17108.8°110.5°
C2'C3'H19110.0°110.5°
O2'C2'H17110.1°110.5°
C2'O2'H18109.5°114.0°
O3'C3'H19111.3°110.6°
C3'O3'H20109.5°114.0°
O3APBO3B105.5°109.5°
O3APBO1B111.2°109.4°
O3APBO2B107.6°109.5°
PBO3BPG109.0°134.0°
O3BPBO1B121.5°109.5°
O3BPBO2B100.0°109.5°
O3BPGO1G110.3°109.5°
O3BPGO3G109.1°109.5°
O3BPGS2G122.8°109.5°
O1BPBO2B109.9°109.4°
PBO2BH8109.5°113.9°
O1GPGO3G106.2°109.4°
O1GPGS2G111.0°109.5°
O3GPGS2G95.4°109.5°
PGO3GH9109.5°114.1°
PGS2GC32122.1°103.0°
S2GC32C33103.1°109.5°
S2GC32H10111.0°109.4°
S2GC32H11111.0°109.5°
C32C33O35121.0°120.0°
C32C33N34118.8°120.0°
C33C32H10111.0°109.5°
C33C32H11111.0°109.5°
O35C33N34120.2°120.0°
C33N34CB120.0°120.0°
C33N34H12120.0°120.0°
N34CBCA114.1°109.5°
N34CBH5108.3°109.5°
N34CBH6108.3°109.5°
CBN34H12120.0°120.0°
OCCA120.3°120.0°
OCOXT113.4°120.0°
CBCAN113.5°109.5°
CBCAC107.7°109.5°
CBCAHA108.4°109.4°
CACBH5108.3°109.4°
CACBH6108.3°109.5°
NCAC109.4°109.5°
CANH109.5°111.0°
CANH2109.5°111.0°
NCAHA109.3°109.5°
CCAHA108.4°109.5°
CACOXT60.0°120.0°
HNH2109.5°111.0°
H5CBH6109.5°109.4°
H10C32H11109.5°109.5°
H13C5'H14109.4°109.5°
H22N6H23109.5°120.0°
COXTHXT90.0°117.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2N1C6N6179.6°180.0°
N1C2N3H24180.0°180.0°
C2N1C6C52.1°0.1°
N1C2N3C40.4°0.0°
N1C6N6C5178.2°179.9°
C6N1C2N31.5°0.0°
N1C6C5C41.5°0.1°
N1C6C5N7179.4°179.5°
N1C6N6H220.0°180.0°
N1C6N6H23120.0°0.0°
C6N1C2H24178.5°180.0°
N6C6C5C4179.8°180.0°
N6C6C5N71.1°0.6°
C6N6H22H23120.0°179.9°
C2N3C4C50.1°0.0°
C2N3C4N9179.2°180.0°
C6C5C4N30.5°0.1°
C6C5C4N7179.4°179.6°
C6C5C4N9179.9°180.0°
C6C5N7C8179.6°179.7°
C5C6N6H22178.2°0.1°
C5C6N6H2361.7°180.0°
N3C4C5N9179.5°180.0°
N3C4C5N7179.9°179.6°
N3C4N9C8180.0°179.7°
N3C4N9C1'1.6°0.0°
C4N3C2H24179.7°180.0°
C4C5N7C80.4°0.3°
C5C4N9C80.7°0.4°
C5C4N9C1'179.1°179.9°
N7C5C4N90.7°0.4°
C5N7C8N90.0°0.0°
C5N7C8H21180.0°180.0°
C4N9C1'O4'125.7°156.7°
C4N9C8N70.5°0.2°
C4N9C8C1'178.3°179.7°
C4N9C1'C2'116.3°87.9°
C4N9C1'H164.5°34.5°
C4N9C8H21179.5°179.8°
O4'C1'N9C852.3°23.6°
O4'C1'N9C2'118.0°115.3°
O4'C1'N9H16121.2°122.3°
C1'O4'C4'C5'144.6°159.3°
O4'C1'C2'H16120.8°118.9°
C1'O4'C4'C3'21.3°40.5°
O4'C1'C2'C3'5.5°24.0°
O4'C1'C2'O2'128.5°142.6°
C1'O4'C4'H1594.7°78.3°
O4'C1'C2'H17110.8°94.7°
C4'O4'C1'N9136.5°159.3°
O4'C4'C5'O5'54.5°69.6°
O4'C4'C5'C3'121.0°115.4°
O4'C4'C5'H15121.5°122.4°
C4'O4'C1'C2'17.0°40.5°
O4'C4'C3'H15116.8°118.9°
O4'C4'C3'C2'16.8°24.0°
O4'C4'C3'O3'137.7°142.6°
O4'C4'C5'H13174.7°50.4°
O4'C4'C5'H1465.7°170.4°
C4'O4'C1'H16102.8°78.4°
O4'C4'C3'H19101.8°94.7°
N7C8N9H21180.0°180.0°
N7C8N9C1'178.8°179.9°
O2APAO1AO5'120.2°120.0°
O2APAO1AO3A121.5°120.0°
O2APAO5'C5'31.0°55.0°
O2APAO5'O3A137.5°120.0°
O2APAO3APB36.3°40.0°
O2APAO1AH70.0°180.0°
C8N9C1'C2'65.6°91.8°
C8N9C1'H16173.5°145.9°
N9C1'C2'H16121.2°122.3°
N9C1'C2'C3'123.5°142.8°
N9C1'C2'O2'113.6°98.6°
N9C1'C2'H177.2°24.1°
C1'N9C8H211.2°0.1°
O1APAO5'C5'147.9°65.0°
O1APAO5'O3A105.5°120.0°
O1APAO3APB146.3°80.0°
O5'C5'C4'H13120.2°120.0°
O5'C5'C4'H14120.2°120.0°
O5'C5'C4'C3'66.5°175.0°
C5'O5'PAO3A106.6°175.0°
O5'C5'H13H14119.3°120.0°
O5'C5'C4'H15176.0°52.8°
C4'C5'O5'PA163.8°180.0°
C5'C4'C3'H15117.3°122.2°
C5'C4'C3'C2'142.7°142.8°
C5'C4'C3'O3'96.4°98.6°
C4'C5'H13H14119.3°120.0°
C5'C4'C3'H1924.0°24.2°
C1'C2'C3'C4'6.9°0.0°
C1'C2'C3'O2'120.3°118.6°
C1'C2'C3'H17116.4°118.7°
C1'C2'O2'H17120.0°122.7°
C1'C2'C3'O3'122.6°118.6°
C1'C2'O2'H18180.0°180.0°
C1'C2'C3'H19111.8°118.7°
O5'PAO3APB97.6°160.0°
O5'PAO1AH7120.2°60.0°
PAO5'C5'H1343.6°60.0°
PAO5'C5'H1475.9°60.0°
C4'C3'C2'O3'115.7°118.6°
C4'C3'C2'H19118.7°118.7°
C4'C3'C2'O2'113.5°118.6°
C4'C3'O3'H19119.7°122.7°
C3'C4'C5'H1353.8°65.0°
C3'C4'C5'H14173.3°55.0°
C4'C3'C2'H17123.3°118.7°
C4'C3'O3'H20180.0°180.0°
PAO3APBO3B77.6°160.0°
PAO3APBO1B56.0°40.0°
PAO3APBO2B176.3°80.0°
O3APAO1AH7121.5°60.0°
C3'C2'O2'H17122.5°122.7°
C2'C3'O3'H19124.8°122.7°
C2'C3'C4'H15100.0°95.0°
C3'C2'C1'H16115.3°94.9°
C3'C2'O2'H1862.5°65.4°
C2'C3'O3'H2064.5°65.4°
O2'C2'C3'O3'2.3°0.0°
O2'C2'C1'H167.7°23.8°
O2'C2'C3'H19127.8°122.7°
O3'C3'C4'H1520.9°23.7°
O3'C3'C2'H17121.0°122.7°
O3APBO3BO1B127.6°120.0°
O3APBO3BO2B111.5°120.1°
O3APBO3BPG171.2°165.0°
O3APBO1BO2B119.0°120.0°
O3APBO2BH8121.2°60.0°
O3BPBO1BO2B116.0°120.0°
PBO3BPGO1G144.0°60.0°
PBO3BPGO3G27.7°60.0°
PBO3BPGS2G82.2°180.0°
O3BPBO2BH8128.9°60.1°
PGO3BPBO1B61.2°45.0°
PGO3BPBO2B59.7°74.9°
O3BPGO1GO3G118.1°120.0°
O3BPGO1GS2G139.5°120.0°
O3BPGO3GS2G127.5°120.0°
O3BPGS2GC3230.6°180.0°
O3BPGO3GH9118.8°60.0°
O1BPBO2BH80.0°180.0°
O1GPGO3GS2G113.7°120.0°
O1GPGS2GC32164.1°60.0°
O1GPGO3GH90.0°180.0°
O3GPGS2GC3286.3°60.0°
PGS2GC32C33177.9°75.0°
S2GPGO3GH9113.7°60.0°
PGS2GC32H1063.2°165.0°
PGS2GC32H1158.9°45.0°
S2GC32C33H10119.0°120.0°
S2GC32C33H11119.0°120.0°
S2GC32C33O3551.0°0.0°
S2GC32C33N34127.6°180.0°
S2GC32H10H11123.0°120.0°
C32C33O35N34178.5°179.9°
C32C33N34CB170.5°180.0°
C33C32H10H11122.9°120.0°
C32C33N34H129.5°0.1°
O35C33N34CB8.1°0.1°
O35C33C32H10169.9°120.0°
O35C33C32H1168.0°120.0°
O35C33N34H12171.9°180.0°
C33N34CBH12180.0°179.9°
C33N34CBCA91.6°180.0°
C33N34CBH5147.7°60.0°
C33N34CBH629.0°60.0°
N34C33C32H108.6°60.0°
N34C33C32H11113.5°60.0°
N34CBCAH5120.7°120.0°
N34CBCAH6120.7°120.0°
N34CBCAN12.5°55.0°
N34CBCAC108.8°175.0°
N34CBCAHA134.1°65.0°
N34CBH5H6117.9°120.0°
OCCACB120.7°100.0°
OCCAN3.1°20.0°
OCCAOXT101.2°180.0°
OCCAHA122.2°140.1°
OCOXTHXT90.0°0.0°
CBCANC120.3°120.0°
CBCANHA121.1°120.0°
CBCACHA117.1°119.9°
CBCANH180.0°176.1°
CBCANH260.0°60.0°
CACBH5H6117.9°120.0°
CACBN34H1288.4°0.1°
CBCACOXT19.5°80.0°
NCACHA119.1°120.0°
CANHH2120.0°123.9°
NCACBH5108.2°65.0°
NCACBH6133.1°175.0°
NCACOXT104.2°160.0°
CCANH59.7°63.9°
CCANH260.3°60.0°
CCACBH5130.5°55.0°
CCACBH611.9°65.0°
CACOXTHXT90.0°180.0°
HNCAHA58.9°56.1°
H2NCAHA178.9°180.0°
HACACBH513.4°175.0°
HACACBH6105.3°55.0°
HACACOXT136.6°40.0°
H5CBN34H1232.3°119.9°
H6CBN34H12151.0°120.1°
H13C5'C4'H1563.8°172.8°
H14C5'C4'H1555.8°67.2°
H15C4'C3'H19141.4°146.4°
H16C1'C2'H17128.4°146.4°
H17C2'O2'H1860.0°57.3°
H17C2'C3'H194.5°0.0°
H19C3'O3'H2060.3°57.3°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon