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SummaryGeometryRelated PDB entries

ZVN

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C04C05sing1.53Å1.53Å
C04N03sing1.47Å1.51Å
C05N06sing1.47Å1.42Å
S15C14sing1.76Å1.65ÅAromatic
S15C07sing1.76Å1.70ÅAromatic
C13C14doub1.39Å1.41ÅAromatic
C13C12sing1.38Å1.37ÅAromatic
N03C07sing1.38Å1.46Å
N03C02sing1.47Å1.50Å
C14C09sing1.40Å1.39ÅAromatic
N06C01sing1.47Å1.41Å
C07N08doub1.29Å1.37ÅAromatic
C12C11doub1.39Å1.41ÅAromatic
C01C02sing1.53Å1.54Å
C09N08sing1.35Å1.45ÅAromatic
C09C10doub1.41Å1.39ÅAromatic
C11C10sing1.37Å1.39ÅAromatic
C10H1sing1.08Å1.08Å
C13H2sing1.08Å1.08Å
C01H3sing1.09Å1.10Å
C01H4sing1.09Å1.10Å
C02H5sing1.09Å1.10Å
C02H6sing1.09Å1.10Å
C04H7sing1.09Å1.10Å
C04H8sing1.09Å1.10Å
C05H9sing1.09Å1.10Å
C05H10sing1.09Å1.10Å
N06H11sing1.01Å1.00Å
C11H13sing1.08Å1.08Å
C12H14sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C05C04N03115.8°109.4°
C04C05N06113.2°109.4°
C05C04H7107.9°109.5°
C05C04H8107.9°109.5°
C04C05H9108.5°109.5°
C04C05H10108.5°109.5°
C04N03C07122.2°111.0°
C04N03C02116.5°110.9°
N03C04H7107.9°109.5°
N03C04H8107.9°109.5°
C05N06C01113.6°110.9°
N06C05H9108.5°109.5°
N06C05H10108.5°109.5°
C05N06H11108.4°111.0°
C14S15C0797.7°90.5°
S15C14C13133.5°131.2°
S15C14C09106.9°108.4°
S15C07N03125.6°124.8°
S15C07N08110.0°110.3°
C14C13C12120.1°120.2°
C13C14C09119.5°120.4°
C14C13H2120.0°119.9°
C13C12C11120.3°120.0°
C12C13H2120.0°119.9°
C13C12H14119.8°120.0°
C07N03C02121.3°111.0°
N03C07N08124.4°124.9°
N03C02C01115.1°109.4°
N03C02H5108.0°109.5°
N03C02H6108.1°109.5°
C14C09N08115.8°112.8°
C14C09C10120.3°118.4°
N06C01C02113.8°109.4°
N06C01H3108.4°109.5°
N06C01H4108.4°109.5°
C01N06H11108.4°111.0°
C07N08C09109.6°117.9°
C12C11C10119.7°120.6°
C12C11H13120.2°119.7°
C11C12H14119.8°120.1°
C02C01H3108.4°109.5°
C02C01H4108.4°109.5°
C01C02H5108.1°109.5°
C01C02H6108.0°109.5°
N08C09C10123.9°128.7°
C09C10C11120.1°120.4°
C09C10H1120.0°119.8°
C11C10H1120.0°119.7°
C10C11H13120.1°119.7°
H3C01H4109.5°109.5°
H5C02H6109.5°109.5°
H7C04H8109.4°109.5°
H9C05H10109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C05C04N03H7121.0°120.0°
C05C04N03H8121.0°119.9°
C04C05N06H9120.6°119.9°
C04C05N06H10120.5°120.0°
C05C04N03C07152.2°176.8°
C05C04N03C0226.2°59.3°
C04C05N06C0156.9°59.3°
C05C04H7H8117.1°120.0°
C04C05H9H10118.3°120.0°
C04C05N06H11177.5°64.5°
N03C04C05N0613.9°58.4°
C04N03C07S155.8°123.8°
C04N03C07C02178.3°123.8°
C04N03C07N08171.0°56.2°
C04N03C02C0126.0°59.3°
C04N03C02H5146.9°60.6°
C04N03C02H694.8°179.3°
N03C04H7H8117.1°120.1°
N03C04C05H9106.7°178.4°
N03C04C05H10134.4°61.6°
C05N06C01H11120.6°123.8°
C05N06C01C0257.2°59.3°
C05N06C01H363.5°60.6°
C05N06C01H4177.8°179.3°
N06C05C04H7107.1°61.6°
N06C05C04H8134.8°178.3°
N06C05H9H10118.3°120.1°
S15C14C13C09178.8°179.7°
S15C14C13C12179.7°180.0°
C14S15C07N03178.1°179.8°
C14S15C07N080.9°0.1°
S15C14C09N080.0°0.2°
S15C14C09C10179.4°179.8°
S15C14C13H20.3°0.3°
C07S15C14C13179.4°180.0°
S15C07N03N08176.8°180.0°
S15C07N03C02175.9°0.0°
C07S15C14C090.5°0.2°
S15C07N08C091.0°0.0°
C14C13C12H2180.0°179.7°
C14C13C12C111.3°0.3°
C13C14C09N08179.1°180.0°
C13C14C09C100.3°0.0°
C14C13C12H14178.7°180.0°
C12C13C14C090.9°0.3°
C13C12C11H14180.0°179.7°
C13C12C11C101.1°0.1°
C13C12C11H13178.9°180.0°
C07N03C02C01152.3°176.8°
N03C07N08C09178.3°179.9°
C07N03C02H531.5°63.2°
C07N03C02H686.8°56.9°
C07N03C04H731.2°63.2°
C07N03C04H886.9°56.9°
N03C02C01N0614.1°58.4°
C02N03C07N087.3°180.0°
N03C02C01H5120.8°120.0°
N03C02C01H6120.8°120.0°
N03C02C01H3106.5°61.6°
N03C02C01H4134.8°178.3°
N03C02H5H6117.5°120.1°
C02N03C04H7147.2°60.6°
C02N03C04H894.7°179.3°
C14C09N08C070.7°0.1°
C14C09N08C10179.4°180.0°
C14C09C10C110.1°0.2°
C14C09C10H1179.9°180.0°
C09C14C13H2179.1°180.0°
N06C01C02H3120.7°119.9°
N06C01C02H4120.6°120.0°
N06C01H3H4118.1°120.1°
N06C01C02H5106.7°61.6°
N06C01C02H6135.0°178.4°
C01N06C05H963.7°179.2°
C01N06C05H10177.5°60.6°
C07N08C09C10179.9°179.9°
C12C11C10C090.5°0.2°
C12C11C10H13180.0°179.9°
C12C11C10H1179.5°180.0°
C11C12C13H2178.7°180.0°
C02C01H3H4118.0°120.1°
C01C02H5H6117.4°120.0°
C02C01N06H11177.8°64.5°
N08C09C10C11179.2°179.8°
N08C09C10H10.8°0.0°
C09C10C11H1180.0°179.8°
C09C10C11H13179.5°179.7°
C10C11C12H14178.9°179.8°
H1C10C11H130.5°0.1°
H2C13C12H141.3°0.3°
H3C01C02H5132.6°178.5°
H3C01C02H614.3°58.4°
H3C01N06H1157.1°175.5°
H4C01C02H513.9°58.4°
H4C01C02H6104.4°61.7°
H4C01N06H1161.6°55.4°
H7C04C05H9132.4°58.4°
H7C04C05H1013.5°178.5°
H8C04C05H914.2°61.7°
H8C04C05H10104.7°58.4°
H9C05N06H1156.9°55.4°
H10C05N06H1162.0°175.5°
H13C11C12H141.1°0.4°

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PDB entries from 2024-07-10

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