Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

ZVD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
F1C1sing1.35Å1.30Å
C2C1doub1.38Å1.39ÅAromatic
C2N1sing1.33Å1.34ÅAromatic
C1C4sing1.40Å1.41ÅAromatic
N1C3doub1.32Å1.35ÅAromatic
C3N2sing1.32Å1.35ÅAromatic
C4N3sing1.39Å1.35Å
C4N2doub1.33Å1.38ÅAromatic
N3C5sing1.39Å1.39Å
C5N5doub1.33Å1.33ÅAromatic
C5C6sing1.39Å1.44ÅAromatic
N5C11sing1.32Å1.33ÅAromatic
C6C7doub1.39Å1.43ÅAromatic
C11C12doub1.39Å1.41ÅAromatic
C7C12sing1.41Å1.44ÅAromatic
C7N4sing1.39Å1.39Å
C8C9sing1.53Å1.53Å
C8N4sing1.46Å1.48Å
C8C10sing1.53Å1.54Å
C12C13sing1.47Å1.46Å
C13N6sing1.35Å1.39Å
C13O1doub1.22Å1.24Å
N6C14sing1.47Å1.42Å
F2C15sing1.40Å1.37Å
C15C14sing1.53Å1.57Å
C15C16sing1.53Å1.55Å
C18C16sing1.53Å1.56Å
C16C17sing1.53Å1.54Å
C16O2sing1.43Å1.40Å
C18H23sing1.09Å1.10Å
C18H21sing1.09Å1.10Å
C18H22sing1.09Å1.10Å
C17H20sing1.09Å1.10Å
C17H19sing1.09Å1.10Å
C17H18sing1.09Å1.10Å
C15H17sing1.09Å1.10Å
C11H13sing1.08Å1.08Å
O2H24sing0.97Å0.95Å
C14H15sing1.09Å1.10Å
C14H16sing1.09Å1.10Å
N6H14sing0.97Å1.00Å
N4H5sing0.97Å1.00Å
C8H6sing1.09Å1.10Å
C10H10sing1.09Å1.10Å
C10H11sing1.09Å1.10Å
C10H12sing1.09Å1.10Å
C9H9sing1.09Å1.10Å
C9H8sing1.09Å1.10Å
C9H7sing1.09Å1.10Å
C6H4sing1.08Å1.08Å
N3HN3sing0.97Å1.00Å
C3H3sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
F1C1C2119.6°120.9°
F1C1C4121.6°120.8°
C1C2N1121.4°119.2°
C2C1C4118.4°118.3°
C1C2H2119.3°120.5°
C2N1C3117.0°121.0°
N1C2H2119.3°120.4°
C1C4N3118.3°120.6°
C1C4N2120.9°118.9°
N1C3N2127.0°121.8°
N1C3H3116.5°119.1°
C3N2C4115.2°120.7°
N2C3H3116.5°119.1°
N3C4N2120.8°120.5°
C4N3C5131.2°120.0°
C4N3HN3114.4°120.0°
N3C5N5117.5°119.5°
N3C5C6119.2°119.5°
C5N3HN3114.4°120.0°
N5C5C6123.1°121.0°
C5N5C11117.0°122.0°
C5C6C7119.7°119.2°
C5C6H4120.2°120.3°
N5C11C12126.8°120.7°
N5C11H13116.6°119.6°
C6C7C12116.2°118.2°
C6C7N4123.1°120.9°
C7C6H4120.1°120.5°
C11C12C7117.2°118.9°
C11C12C13120.1°120.6°
C12C11H13116.6°119.7°
C12C7N4120.6°120.9°
C7C12C13122.7°120.6°
C7N4C8124.5°120.0°
C7N4H5105.6°120.0°
C9C8N4107.8°109.5°
C9C8C10110.1°109.5°
C9C8H6109.2°109.5°
C8C9H9109.5°109.4°
C8C9H8109.5°109.5°
C8C9H7109.5°109.5°
N4C8C10110.8°109.5°
C8N4H5105.6°120.0°
N4C8H6109.8°109.5°
C10C8H6109.1°109.5°
C8C10H10109.5°109.5°
C8C10H11109.5°109.5°
C8C10H12109.5°109.5°
C12C13N6116.5°120.0°
C12C13O1121.6°120.0°
N6C13O1121.6°120.0°
C13N6C14124.2°120.0°
C13N6H14117.9°120.0°
N6C14C15114.1°109.5°
N6C14H15108.3°109.4°
N6C14H16108.3°109.5°
C14N6H14117.9°120.0°
F2C15C14108.3°109.5°
F2C15C16107.6°109.5°
F2C15H17112.0°109.4°
C14C15C16110.8°109.5°
C14C15H17109.0°109.5°
C15C14H15108.3°109.5°
C15C14H16108.3°109.4°
C15C16C18109.2°109.5°
C15C16C17112.9°109.4°
C15C16O2106.6°109.4°
C16C15H17109.2°109.5°
C18C16C17109.3°109.5°
C18C16O2113.3°109.5°
C16C18H23109.5°109.4°
C16C18H21109.4°109.5°
C16C18H22109.5°109.5°
C17C16O2105.6°109.5°
C16C17H20109.5°109.5°
C16C17H19109.4°109.5°
C16C17H18109.5°109.5°
C16O2H24109.5°114.0°
H23C18H21109.5°109.5°
H23C18H22109.5°109.5°
H21C18H22109.5°109.5°
H20C17H19109.5°109.5°
H20C17H18109.5°109.5°
H19C17H18109.5°109.5°
H15C14H16109.5°109.5°
H10C10H11109.5°109.5°
H10C10H12109.5°109.4°
H11C10H12109.5°109.4°
H9C9H8109.5°109.5°
H9C9H7109.5°109.5°
H8C9H7109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
F1C1C2C4172.5°180.0°
F1C1C2N1174.5°180.0°
F1C1C4N35.3°0.0°
F1C1C4N2177.4°179.7°
F1C1C2H25.5°0.0°
C1C2N1H2180.0°180.0°
C1C2N1C31.9°0.2°
C2C1C4N3177.7°180.0°
C2C1C4N25.1°0.3°
N1C2C1C42.0°0.0°
C2N1C3N23.1°0.2°
C2N1C3H3176.9°179.7°
C1C4N2C34.0°0.3°
C1C4N3N2177.3°179.7°
C1C4N3C5164.4°175.2°
C1C4N3HN315.6°4.8°
C4C1C2H2178.0°180.0°
N1C3N2H3180.0°179.9°
N1C3N2C40.2°0.0°
C3N1C2H2178.1°179.8°
C3N2C4N3178.8°180.0°
C4N3C5HN3180.0°180.0°
C4N3C5N5166.6°5.7°
C4N3C5C618.0°174.8°
N2C4N3C518.3°5.1°
N2C4N3HN3161.7°174.9°
C4N2C3H3179.8°179.9°
N3C5N5C6175.2°179.5°
N3C5N5C11175.3°180.0°
N3C5C6C7174.4°179.7°
N3C5C6H45.6°0.2°
N5C5C6C70.7°0.2°
C5N5C11C120.7°0.5°
C5N5C11H13179.3°179.7°
N5C5C6H4179.3°179.7°
N5C5N3HN313.4°174.3°
C6C5N5C110.1°0.5°
C5C6C7H4180.0°180.0°
C5C6C7C121.0°0.0°
C5C6C7N4178.1°179.9°
C6C5N3HN3162.0°5.2°
N5C11C12H13180.0°179.8°
N5C11C12C70.4°0.3°
N5C11C12C13179.5°179.7°
C6C7C12C110.4°0.0°
C6C7C12N4179.1°179.9°
C6C7N4C83.1°5.6°
C6C7C12C13178.6°180.0°
C6C7N4H5118.9°174.4°
C11C12C7C13179.1°180.0°
C11C12C7N4178.7°179.9°
C11C12C13N628.8°5.5°
C11C12C13O1157.1°174.2°
C12C7N4C8175.9°174.5°
C7C12C13N6152.1°174.5°
C7C12C13O121.9°5.8°
C7C12C11H13179.6°180.0°
C12C7N4H562.0°5.5°
C12C7C6H4179.0°180.0°
C7N4C8C977.6°85.0°
C7N4C8H5122.1°180.0°
C7N4C8C10161.9°155.0°
N4C7C12C132.2°0.1°
C7N4C8H641.3°35.0°
N4C7C6H41.9°0.0°
C9C8N4C10120.5°120.0°
C9C8N4H6118.8°120.0°
C9C8C10H6119.8°120.0°
C9C8N4H544.5°95.0°
C9C8C10H10180.0°60.0°
C9C8C10H1160.0°180.0°
C9C8C10H1260.0°60.0°
C8C9H9H8120.0°120.0°
C8C9H9H7120.0°120.0°
C8C9H8H7120.0°120.0°
N4C8C10H6121.1°120.0°
N4C8C10H1060.9°180.0°
N4C8C10H11179.1°60.0°
N4C8C10H1259.1°60.0°
N4C8C9H9180.0°60.0°
N4C8C9H860.0°180.0°
N4C8C9H760.0°60.0°
C10C8N4H576.0°25.0°
C8C10H10H11120.0°120.1°
C8C10H10H12120.0°120.0°
C8C10H11H12120.0°120.0°
C10C8C9H959.1°180.0°
C10C8C9H8179.1°60.0°
C10C8C9H761.0°60.0°
C12C13N6O1174.1°179.7°
C12C13N6C14176.4°179.7°
C13C12C11H130.5°0.0°
C12C13N6H143.6°0.3°
C13N6C14H14180.0°180.0°
C13N6C14C1596.0°180.0°
C13N6C14H1524.6°60.0°
C13N6C14H16143.3°60.0°
O1C13N6C149.6°0.0°
O1C13N6H14170.4°180.0°
N6C14C15F256.8°60.0°
N6C14C15H15120.7°120.0°
N6C14C15H16120.7°120.0°
N6C14C15C16174.6°180.0°
N6C14C15H1765.2°60.0°
N6C14H15H16117.9°120.0°
F2C15C14C16117.8°120.0°
F2C15C14H17122.0°119.9°
F2C15C16H17121.8°119.9°
F2C15C16C1872.9°55.0°
F2C15C16C17165.2°65.1°
F2C15C16O249.8°175.0°
F2C15C14H1563.9°179.9°
F2C15C14H16177.5°60.0°
C14C15C16H17120.1°120.0°
C14C15C16C18168.9°175.0°
C14C15C16C1747.0°55.0°
C14C15C16O268.4°65.0°
C15C14H15H16117.9°120.0°
C15C14N6H1484.0°0.0°
C15C16C18C17123.9°120.0°
C15C16C18O2118.6°120.0°
C15C16C17O2116.0°120.0°
C15C16C18H23180.0°180.0°
C15C16C18H2160.0°60.0°
C15C16C18H2260.0°60.1°
C15C16C17H20180.0°60.1°
C15C16C17H1960.0°60.0°
C15C16C17H1860.0°180.0°
C15C16O2H24180.0°60.0°
C16C15C14H1553.9°60.0°
C16C15C14H1664.7°60.0°
C18C16C17O2122.2°120.0°
C16C18H23H21120.0°120.0°
C16C18H23H22120.0°120.0°
C16C18H21H22120.0°120.0°
C18C16C17H2058.2°60.0°
C18C16C17H19178.3°180.0°
C18C16C17H1861.8°60.0°
C18C16C15H1748.8°65.0°
C18C16O2H2459.9°60.0°
C17C16C18H2356.1°60.0°
C17C16C18H2164.0°180.0°
C17C16C18H22176.1°60.0°
C16C17H20H19120.0°120.0°
C16C17H20H18120.0°120.0°
C16C17H19H18120.0°120.0°
C17C16C15H1773.0°175.0°
C17C16O2H2459.8°179.9°
O2C16C18H2361.4°60.0°
O2C16C18H21178.6°60.0°
O2C16C18H2258.6°180.0°
O2C16C17H2064.0°180.0°
O2C16C17H1956.0°60.0°
O2C16C17H18176.0°60.0°
O2C16C15H17171.5°55.0°
H23C18H21H22120.0°120.0°
H20C17H19H18120.0°120.0°
H17C15C14H15174.1°60.0°
H17C15C14H1655.5°179.9°
H15C14N6H14155.3°120.0°
H16C14N6H1436.7°120.0°
H5N4C8H6163.3°145.0°
H6C8C10H1060.2°60.0°
H6C8C10H1159.8°60.0°
H6C8C10H12179.8°180.0°
H6C8C9H960.7°60.0°
H6C8C9H859.3°60.0°
H6C8C9H7179.2°180.0°
H10C10H11H12120.0°119.9°
H9C9H8H7120.0°120.0°

249697

PDB entries from 2026-02-25

PDB statisticsPDBj update infoContact PDBjnumon