ZUK
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C | CA | sing | 1.51Å | 1.53Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| N | CA | sing | 1.47Å | 1.46Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| O | C | doub | 1.21Å | 1.23Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CA | CB | sing | 1.53Å | 1.53Å | |
| CB | HBA | sing | 1.09Å | 1.10Å | |
| CB | CG | sing | 1.53Å | 1.53Å | |
| CD | HDA | sing | 1.09Å | 1.10Å | |
| CD | CE | sing | 1.51Å | 1.51Å | |
| CE | NZ1 | sing | 1.32Å | 1.38Å | Aromatic |
| CG | CD | sing | 1.53Å | 1.52Å | |
| CG | HGA | sing | 1.09Å | 1.10Å | |
| CT | CH1 | sing | 1.39Å | 1.46Å | Aromatic |
| CT | HT | sing | 1.08Å | 1.08Å | |
| CH1 | HH1 | sing | 1.08Å | 1.08Å | |
| CH2 | CT | doub | 1.39Å | 1.47Å | Aromatic |
| OXT | C | sing | 1.34Å | 1.33Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å | |
| NZ1 | CH1 | doub | 1.32Å | 1.46Å | Aromatic |
| NZ2 | CE | doub | 1.32Å | 1.39Å | Aromatic |
| NZ2 | CH2 | sing | 1.32Å | 1.46Å | Aromatic |
| HB | CB | sing | 1.09Å | 1.10Å | |
| HD | CD | sing | 1.09Å | 1.10Å | |
| HG | CG | sing | 1.09Å | 1.10Å | |
| HH2 | CH2 | sing | 1.08Å | 1.08Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C | CA | N | 110.8° | 109.4° |
| CA | C | O | 120.7° | 120.0° |
| C | CA | HA | 108.6° | 109.5° |
| C | CA | CB | 110.0° | 109.5° |
| CA | C | OXT | 116.1° | 119.9° |
| H | N | CA | 109.5° | 111.0° |
| H | N | H2 | 109.5° | 111.0° |
| CA | N | H2 | 109.4° | 111.0° |
| N | CA | HA | 107.9° | 109.4° |
| N | CA | CB | 110.6° | 109.5° |
| O | C | OXT | 123.3° | 120.0° |
| HA | CA | CB | 108.8° | 109.5° |
| CA | CB | HBA | 107.9° | 109.5° |
| CA | CB | CG | 114.3° | 109.5° |
| CA | CB | HB | 107.9° | 109.5° |
| HBA | CB | CG | 107.9° | 109.4° |
| HBA | CB | HB | 111.0° | 109.5° |
| CB | CG | CD | 112.2° | 109.5° |
| CB | CG | HGA | 108.6° | 109.4° |
| CG | CB | HB | 107.9° | 109.5° |
| CB | CG | HG | 108.6° | 109.5° |
| HDA | CD | CE | 108.9° | 109.5° |
| HDA | CD | CG | 108.9° | 109.4° |
| HDA | CD | HD | 110.0° | 109.5° |
| CD | CE | NZ1 | 120.4° | 119.1° |
| CE | CD | CG | 111.1° | 109.5° |
| CD | CE | NZ2 | 120.7° | 119.1° |
| CE | CD | HD | 109.0° | 109.5° |
| CE | NZ1 | CH1 | 122.7° | 120.9° |
| NZ1 | CE | NZ2 | 118.9° | 121.7° |
| CD | CG | HGA | 108.6° | 109.5° |
| CG | CD | HD | 108.9° | 109.5° |
| CD | CG | HG | 108.6° | 109.5° |
| HGA | CG | HG | 110.4° | 109.5° |
| CH1 | CT | HT | 121.5° | 120.8° |
| CT | CH1 | HH1 | 120.2° | 120.4° |
| CH1 | CT | CH2 | 117.0° | 118.4° |
| CT | CH1 | NZ1 | 119.5° | 119.1° |
| HT | CT | CH2 | 121.6° | 120.8° |
| HH1 | CH1 | NZ1 | 120.2° | 120.5° |
| CT | CH2 | NZ2 | 119.2° | 119.1° |
| CT | CH2 | HH2 | 120.4° | 120.4° |
| C | OXT | HXT | 109.5° | 116.9° |
| CE | NZ2 | CH2 | 122.7° | 120.8° |
| NZ2 | CH2 | HH2 | 120.4° | 120.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C | CA | N | H | 180.0° | 176.1° |
| C | CA | N | HA | 118.8° | 120.0° |
| C | CA | N | CB | 122.3° | 120.0° |
| C | CA | N | H2 | 60.0° | 60.0° |
| CA | C | O | OXT | 178.9° | 179.7° |
| C | CA | HA | CB | 119.7° | 120.1° |
| C | CA | CB | HBA | 26.7° | 65.0° |
| C | CA | CB | CG | 146.7° | 175.0° |
| CA | C | OXT | HXT | 179.0° | 180.0° |
| C | CA | CB | HB | 93.3° | 55.0° |
| H | N | CA | H2 | 120.0° | 123.9° |
| H | N | CA | HA | 61.2° | 56.0° |
| H | N | CA | CB | 57.7° | 63.9° |
| N | CA | C | O | 55.1° | 20.0° |
| N | CA | HA | CB | 120.1° | 120.0° |
| N | CA | CB | HBA | 149.4° | 55.0° |
| N | CA | CB | CG | 90.6° | 65.0° |
| N | CA | C | OXT | 125.9° | 159.7° |
| N | CA | CB | HB | 29.4° | 175.0° |
| H2 | N | CA | HA | 178.8° | 180.0° |
| H2 | N | CA | CB | 62.3° | 60.0° |
| O | C | CA | HA | 173.5° | 140.0° |
| O | C | CA | CB | 67.5° | 100.0° |
| O | C | OXT | HXT | 0.0° | 0.3° |
| HA | CA | CB | HBA | 92.1° | 174.9° |
| HA | CA | CB | CG | 27.9° | 54.9° |
| HA | CA | C | OXT | 7.5° | 39.8° |
| HA | CA | CB | HB | 147.9° | 65.1° |
| CA | CB | HBA | CG | 124.0° | 120.0° |
| CA | CB | HBA | HB | 118.0° | 120.0° |
| CA | CB | CG | HB | 120.0° | 120.0° |
| CA | CB | CG | CD | 67.4° | NaN° |
| CA | CB | CG | HGA | 52.6° | 60.0° |
| CB | CA | C | OXT | 111.5° | 80.3° |
| CA | CB | CG | HG | 172.6° | 60.0° |
| HBA | CB | CG | HB | 120.0° | 120.0° |
| HBA | CB | CG | CD | 172.6° | 60.0° |
| HBA | CB | CG | HGA | 67.4° | 180.0° |
| HBA | CB | CG | HG | 52.6° | 60.0° |
| CB | CG | CD | HDA | 141.8° | 60.0° |
| CB | CG | CD | CE | 98.2° | 180.0° |
| CB | CG | CD | HGA | 120.0° | 120.0° |
| CB | CG | CD | HG | 120.0° | 120.0° |
| CB | CG | HGA | HG | 118.9° | 120.0° |
| CB | CG | CD | HD | 21.8° | 60.0° |
| HDA | CD | CE | CG | 120.0° | 120.0° |
| HDA | CD | CE | HD | 120.0° | 120.0° |
| HDA | CD | CE | NZ1 | 53.2° | 30.0° |
| HDA | CD | CG | HD | 120.0° | 119.9° |
| HDA | CD | CG | HGA | 21.8° | 60.0° |
| HDA | CD | CE | NZ2 | 127.2° | 149.7° |
| HDA | CD | CG | HG | 98.2° | 180.0° |
| CD | CE | NZ1 | NZ2 | 179.6° | 179.7° |
| CE | CD | CG | HD | 120.0° | 120.0° |
| CE | CD | CG | HGA | 141.8° | 60.0° |
| CD | CE | NZ1 | CH1 | 179.6° | 180.0° |
| CD | CE | NZ2 | CH2 | 179.6° | 180.0° |
| CE | CD | CG | HG | 21.8° | 60.0° |
| NZ1 | CE | CD | CG | 66.8° | 90.0° |
| CE | NZ1 | CH1 | CT | 0.0° | 0.0° |
| CE | NZ1 | CH1 | HH1 | 180.0° | 179.8° |
| NZ1 | CE | NZ2 | CH2 | 0.0° | 0.2° |
| NZ1 | CE | CD | HD | 173.2° | 150.0° |
| CD | CG | HGA | HG | 118.9° | 120.0° |
| CG | CD | CE | NZ2 | 112.8° | 90.3° |
| CD | CG | CB | HB | 52.6° | 60.0° |
| HGA | CG | CB | HB | 172.6° | 60.0° |
| HGA | CG | CD | HD | 98.2° | 179.9° |
| CH1 | CT | HT | CH2 | 180.0° | 179.9° |
| CT | CH1 | HH1 | NZ1 | 180.0° | 179.8° |
| CH1 | CT | CH2 | NZ2 | 0.0° | 0.2° |
| CH1 | CT | CH2 | HH2 | 180.0° | 180.0° |
| HT | CT | CH1 | HH1 | 0.0° | 0.1° |
| HT | CT | CH1 | NZ1 | 180.0° | 179.7° |
| HT | CT | CH2 | NZ2 | 180.0° | 179.7° |
| HT | CT | CH2 | HH2 | 0.0° | 0.1° |
| HH1 | CH1 | CT | CH2 | 180.0° | 180.0° |
| CH2 | CT | CH1 | NZ1 | 0.0° | 0.2° |
| CT | CH2 | NZ2 | CE | 0.0° | 0.0° |
| CT | CH2 | NZ2 | HH2 | 180.0° | 179.8° |
| CH1 | NZ1 | CE | NZ2 | 0.0° | 0.2° |
| NZ2 | CE | CD | HD | 7.2° | 29.7° |
| CE | NZ2 | CH2 | HH2 | 180.0° | 179.7° |
| HB | CB | CG | HG | 67.4° | 180.0° |
| HD | CD | CG | HG | 141.8° | 60.0° |
