ZSX
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.46Å | |
O | C | doub | 1.21Å | 1.22Å | |
C | CA | sing | 1.51Å | 1.54Å | |
CA | C1 | sing | 1.51Å | 1.52Å | |
C1 | C2 | doub | 1.38Å | 1.40Å | Aromatic |
C1 | C6 | sing | 1.38Å | 1.39Å | Aromatic |
C2 | C3 | sing | 1.38Å | 1.41Å | Aromatic |
C6 | C5 | doub | 1.38Å | 1.39Å | Aromatic |
C3 | C4 | doub | 1.39Å | 1.39Å | Aromatic |
C5 | C4 | sing | 1.39Å | 1.39Å | Aromatic |
C4 | O4 | sing | 1.36Å | 1.36Å | |
O4 | C7 | sing | 1.43Å | 1.44Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
N | H | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C2 | H21 | sing | 1.08Å | 1.08Å | |
C3 | H4 | sing | 1.08Å | 1.08Å | |
C5 | H51 | sing | 1.08Å | 1.08Å | |
C6 | H61 | sing | 1.08Å | 1.08Å | |
C7 | H72 | sing | 1.09Å | 1.10Å | |
C7 | H73 | sing | 1.09Å | 1.10Å | |
C7 | H71 | sing | 1.09Å | 1.10Å | |
C | OXT | sing | 1.34Å | 1.34Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N | CA | C | 105.9° | 109.5° |
N | CA | C1 | 116.0° | 109.4° |
CA | N | H2 | 109.5° | 111.0° |
CA | N | H | 109.5° | 111.0° |
N | CA | HA | 110.2° | 109.4° |
O | C | CA | 119.2° | 120.0° |
O | C | OXT | 121.6° | 120.0° |
C | CA | C1 | 106.0° | 109.5° |
C | CA | HA | 109.1° | 109.5° |
CA | C | OXT | 119.1° | 120.0° |
CA | C1 | C2 | 119.0° | 119.9° |
CA | C1 | C6 | 121.3° | 119.9° |
C1 | CA | HA | 109.4° | 109.5° |
C2 | C1 | C6 | 118.9° | 120.1° |
C1 | C2 | C3 | 120.2° | 120.1° |
C1 | C2 | H21 | 119.9° | 120.0° |
C1 | C6 | C5 | 121.9° | 120.1° |
C1 | C6 | H61 | 119.1° | 120.0° |
C2 | C3 | C4 | 119.1° | 119.9° |
C3 | C2 | H21 | 119.9° | 120.0° |
C2 | C3 | H4 | 120.4° | 120.1° |
C6 | C5 | C4 | 118.5° | 119.9° |
C6 | C5 | H51 | 120.8° | 120.1° |
C5 | C6 | H61 | 119.0° | 119.9° |
C3 | C4 | C5 | 121.2° | 119.9° |
C3 | C4 | O4 | 115.3° | 120.1° |
C4 | C3 | H4 | 120.5° | 120.0° |
C5 | C4 | O4 | 123.5° | 120.1° |
C4 | C5 | H51 | 120.7° | 120.0° |
C4 | O4 | C7 | 117.2° | 117.0° |
O4 | C7 | H72 | 109.5° | 109.4° |
O4 | C7 | H73 | 109.5° | 109.5° |
O4 | C7 | H71 | 109.5° | 109.5° |
H2 | N | H | 109.5° | 111.0° |
H72 | C7 | H73 | 109.5° | 109.4° |
H72 | C7 | H71 | 109.4° | 109.4° |
H73 | C7 | H71 | 109.5° | 109.5° |
C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N | CA | C | O | 17.4° | 20.0° |
N | CA | C | C1 | 123.8° | 120.0° |
N | CA | C | HA | 118.5° | 120.0° |
N | CA | C1 | HA | 125.3° | 119.9° |
N | CA | C1 | C2 | 129.1° | 140.0° |
N | CA | C1 | C6 | 60.9° | 40.3° |
CA | N | H2 | H | 120.0° | 124.0° |
N | CA | C | OXT | 166.6° | 160.0° |
O | C | CA | OXT | 176.0° | 180.0° |
O | C | CA | C1 | 106.3° | 100.0° |
O | C | CA | HA | 136.0° | 139.9° |
O | C | OXT | HXT | 0.0° | 0.0° |
C | CA | C1 | HA | 117.5° | 120.1° |
C | CA | C1 | C2 | 113.8° | 100.0° |
C | CA | C1 | C6 | 56.2° | 79.7° |
C | CA | N | H2 | 180.0° | 176.0° |
C | CA | N | H | 60.0° | 60.0° |
CA | C | OXT | HXT | 175.9° | 180.0° |
CA | C1 | C2 | C6 | 170.2° | 179.7° |
CA | C1 | C2 | C3 | 166.1° | 179.9° |
CA | C1 | C6 | C5 | 166.8° | 179.8° |
C1 | CA | N | H2 | 62.8° | 63.9° |
C1 | CA | N | H | 57.2° | 60.1° |
CA | C1 | C2 | H21 | 14.0° | 0.0° |
CA | C1 | C6 | H61 | 13.2° | 0.0° |
C1 | CA | C | OXT | 69.6° | 80.0° |
C1 | C2 | C3 | H21 | 180.0° | 179.9° |
C2 | C1 | C6 | C5 | 3.2° | 0.5° |
C1 | C2 | C3 | C4 | 0.6° | 0.1° |
C2 | C1 | CA | HA | 3.8° | 20.1° |
C1 | C2 | C3 | H4 | 179.4° | 180.0° |
C2 | C1 | C6 | H61 | 176.8° | 179.7° |
C6 | C1 | C2 | C3 | 4.2° | 0.2° |
C1 | C6 | C5 | H61 | 180.0° | 179.7° |
C1 | C6 | C5 | C4 | 1.3° | 0.5° |
C6 | C1 | CA | HA | 173.8° | 160.2° |
C6 | C1 | C2 | H21 | 175.8° | 179.7° |
C1 | C6 | C5 | H51 | 178.7° | 179.7° |
C2 | C3 | C4 | H4 | 180.0° | 179.9° |
C2 | C3 | C4 | C5 | 4.1° | 0.1° |
C2 | C3 | C4 | O4 | 176.9° | 179.9° |
C6 | C5 | C4 | C3 | 5.1° | 0.2° |
C6 | C5 | C4 | H51 | 180.0° | 179.7° |
C6 | C5 | C4 | O4 | 176.1° | 179.7° |
C3 | C4 | C5 | O4 | 178.9° | 180.0° |
C3 | C4 | O4 | C7 | 175.6° | 180.0° |
C4 | C3 | C2 | H21 | 179.4° | 180.0° |
C3 | C4 | C5 | H51 | 174.9° | 179.9° |
C5 | C4 | O4 | C7 | 5.5° | 0.0° |
C5 | C4 | C3 | H4 | 175.9° | 180.0° |
C4 | C5 | C6 | H61 | 178.7° | 179.7° |
O4 | C4 | C3 | H4 | 3.1° | 0.1° |
O4 | C4 | C5 | H51 | 3.9° | 0.0° |
C4 | O4 | C7 | H72 | 180.0° | 60.0° |
C4 | O4 | C7 | H73 | 60.0° | 59.9° |
C4 | O4 | C7 | H71 | 60.0° | 180.0° |
O4 | C7 | H72 | H73 | 120.0° | 119.9° |
O4 | C7 | H72 | H71 | 120.0° | 120.0° |
O4 | C7 | H73 | H71 | 120.0° | 120.1° |
H2 | N | CA | HA | 62.1° | 56.0° |
H | N | CA | HA | 177.9° | 180.0° |
HA | CA | C | OXT | 48.0° | 40.0° |
H21 | C2 | C3 | H4 | 0.6° | 0.1° |
H51 | C5 | C6 | H61 | 1.3° | 0.0° |
H72 | C7 | H73 | H71 | 119.9° | 120.0° |