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ZPA

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O7C7doub1.21Å1.23Å
C7C6sing1.51Å1.55Å
C7N8sing1.34Å1.42Å
C6S5sing1.81Å1.84Å
C6C10sing1.54Å1.54Å
S5C4sing1.81Å1.83Å
N8C11sing1.46Å1.48Å
N8C9sing1.34Å1.41Å
C11C12sing1.51Å1.54Å
C4C3sing1.53Å1.54Å
C13C12doub1.38Å1.39ÅAromatic
C13C14sing1.38Å1.39ÅAromatic
C10C9sing1.51Å1.53Å
C12C17sing1.38Å1.39ÅAromatic
C14C15doub1.38Å1.39ÅAromatic
C9O9doub1.21Å1.23Å
C3C2sing1.53Å1.53Å
C2C1sing1.51Å1.54Å
C17C16doub1.38Å1.39ÅAromatic
C15C16sing1.38Å1.39ÅAromatic
C1N1sing1.37Å1.32Å
C1N2doub1.29Å1.31Å
O4AC4Asing1.43Å1.44Å
N1C1'sing1.46Å1.45Å
C4AC5Asing1.53Å1.54Å
C4AC3Asing1.53Å1.53Å
C5AO5Asing1.43Å1.45Å
O3AC3Asing1.43Å1.43Å
O5AC1Asing1.43Å1.44Å
C3AC2Asing1.53Å1.52Å
C1'O5'sing1.43Å1.43Å
C1'C2'sing1.53Å1.55Å
C2AC1Asing1.53Å1.53Å
C2AO2Asing1.43Å1.43Å
O5'C5'sing1.43Å1.44Å
C1AO6'sing1.43Å1.42Å
O6'C6'sing1.43Å1.43Å
C2'O2'sing1.43Å1.43Å
C2'C3'sing1.53Å1.53Å
C6'C5'sing1.53Å1.51Å
C5'C4'sing1.53Å1.52Å
C4'C3'sing1.53Å1.52Å
C4'O4'sing1.43Å1.43Å
C3'O3'sing1.43Å1.43Å
C13H1sing1.08Å1.08Å
C14H2sing1.08Å1.08Å
C15H3sing1.08Å1.08Å
C16H4sing1.08Å1.08Å
C17H5sing1.08Å1.08Å
C11H6sing1.09Å1.10Å
C11H7sing1.09Å1.10Å
C10H8sing1.09Å1.10Å
C10H9sing1.09Å1.10Å
C6H10sing1.09Å1.10Å
C4H11sing1.09Å1.10Å
C4H12sing1.09Å1.10Å
C3H13sing1.09Å1.10Å
C3H14sing1.09Å1.10Å
C2H15sing1.09Å1.10Å
C2H16sing1.09Å1.10Å
N2H17sing0.97Å1.00Å
N1H18sing0.97Å1.00Å
C1'H19sing1.09Å1.10Å
C2'H20sing1.09Å1.10Å
O2'H21sing0.97Å0.95Å
C3'H22sing1.09Å1.10Å
O3'H23sing0.97Å0.95Å
C4'H24sing1.09Å1.10Å
O4'H25sing0.97Å0.95Å
C5'H26sing1.09Å1.10Å
C6'H27sing1.09Å1.10Å
C6'H28sing1.09Å1.10Å
C1AH29sing1.09Å1.10Å
C5AH30sing1.09Å1.10Å
C5AH31sing1.09Å1.10Å
C4AH32sing1.09Å1.10Å
O4AH33sing0.97Å0.95Å
C3AH34sing1.09Å1.10Å
O3AH35sing0.97Å0.95Å
C2AH36sing1.09Å1.10Å
O2AH37sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O7C7C6125.9°125.4°
O7C7N8125.2°125.3°
C6C7N8108.8°109.3°
C7C6S5112.5°110.6°
C7C6C10103.5°103.5°
C7C6H10110.9°110.6°
C7N8C11118.5°122.8°
C7N8C9108.3°114.4°
S5C6C10111.4°110.7°
C6S5C4101.2°103.0°
S5C6H10107.5°110.6°
C6C10C9103.7°103.6°
C6C10H8110.9°110.5°
C6C10H9110.9°110.9°
C10C6H10111.0°110.6°
S5C4C3116.2°109.5°
S5C4H11107.8°109.5°
S5C4H12107.7°109.5°
C11N8C9120.2°122.8°
N8C11C12119.6°109.5°
N8C11H6106.9°109.5°
N8C11H7106.9°109.4°
N8C9C10107.4°109.2°
N8C9O9127.0°125.3°
C11C12C13120.3°120.0°
C11C12C17120.4°120.0°
C12C11H6106.9°109.5°
C12C11H7106.9°109.5°
C4C3C2107.4°109.5°
C3C4H11107.8°109.5°
C3C4H12107.8°109.4°
C4C3H13110.0°109.5°
C4C3H14110.0°109.5°
C12C13C14120.3°120.0°
C13C12C17119.2°120.1°
C12C13H1119.9°120.0°
C13C14C15120.3°120.0°
C14C13H1119.9°120.0°
C13C14H2119.8°120.0°
C10C9O9125.6°125.5°
C9C10H8110.9°110.6°
C9C10H9110.9°110.6°
C12C17C16120.8°120.0°
C12C17H5119.6°120.1°
C14C15C16119.8°120.0°
C15C14H2119.9°120.0°
C14C15H3120.1°120.0°
C3C2C1116.1°109.5°
C2C3H13110.0°109.5°
C2C3H14110.0°109.5°
C3C2H15107.8°109.5°
C3C2H16107.8°109.4°
C2C1N1117.1°120.0°
C2C1N2120.4°120.0°
C1C2H15107.8°109.5°
C1C2H16107.8°109.5°
C17C16C15119.7°120.0°
C17C16H4120.2°120.0°
C16C17H5119.6°120.0°
C16C15H3120.1°120.0°
C15C16H4120.1°120.0°
N1C1N2122.5°120.0°
C1N1C1'125.4°120.0°
C1N1H18117.3°120.0°
C1N2H17112.0°119.9°
O4AC4AC5A109.6°109.5°
O4AC4AC3A111.4°109.6°
O4AC4AH32109.6°109.6°
C4AO4AH33109.5°114.0°
N1C1'O5'108.0°109.4°
N1C1'C2'108.3°109.5°
C1'N1H18117.3°120.0°
N1C1'H19107.6°109.5°
C5AC4AC3A109.5°109.1°
C4AC5AO5A111.1°109.4°
C4AC5AH30109.0°109.5°
C4AC5AH31109.0°109.5°
C5AC4AH32108.3°109.5°
C4AC3AO3A111.6°109.5°
C4AC3AC2A107.8°109.0°
C3AC4AH32108.3°109.5°
C4AC3AH34109.0°109.5°
C5AO5AC1A112.8°114.0°
O5AC5AH30109.1°109.4°
O5AC5AH31109.1°109.5°
O3AC3AC2A108.9°109.6°
O3AC3AH34110.4°109.6°
C3AO3AH35109.5°114.0°
O5AC1AC2A110.4°109.4°
O5AC1AO6'108.8°109.4°
O5AC1AH29111.2°109.5°
C3AC2AC1A109.7°109.2°
C3AC2AO2A110.8°109.5°
C2AC3AH34109.1°109.6°
C3AC2AH36108.3°109.5°
O5'C1'C2'118.4°109.4°
C1'O5'C5'118.3°114.1°
O5'C1'H19107.8°109.5°
C1'C2'O2'110.0°109.5°
C1'C2'C3'113.0°109.1°
C2'C1'H19106.4°109.5°
C1'C2'H20107.7°109.5°
C1AC2AO2A110.4°109.5°
C2AC1AO6'104.7°109.5°
C2AC1AH29109.9°109.5°
C1AC2AH36108.2°109.6°
O2AC2AH36109.4°109.6°
C2AO2AH37109.5°113.9°
O5'C5'C6'106.4°109.5°
O5'C5'C4'107.1°109.4°
O5'C5'H26111.8°109.5°
C1AO6'C6'112.5°114.0°
O6'C1AH29111.6°109.5°
O6'C6'C5'101.9°109.5°
O6'C6'H27111.3°109.5°
O6'C6'H28111.4°109.5°
O2'C2'C3'108.9°109.5°
O2'C2'H20109.2°109.6°
C2'O2'H21109.5°114.0°
C2'C3'C4'108.4°109.0°
C2'C3'O3'109.3°109.5°
C3'C2'H20108.0°109.6°
C2'C3'H22108.9°109.5°
C6'C5'C4'109.9°109.5°
C6'C5'H26110.8°109.5°
C5'C6'H27111.3°109.5°
C5'C6'H28111.3°109.5°
C5'C4'C3'107.1°109.2°
C5'C4'O4'110.8°109.5°
C5'C4'H24108.8°109.6°
C4'C5'H26110.6°109.5°
C3'C4'O4'111.1°109.5°
C4'C3'O3'110.9°109.6°
C4'C3'H22109.0°109.6°
C3'C4'H24108.8°109.5°
O4'C4'H24110.1°109.5°
C4'O4'H25109.5°114.0°
O3'C3'H22110.3°109.6°
C3'O3'H23109.5°114.0°
H6C11H7109.5°109.5°
H8C10H9109.5°110.5°
H11C4H12109.4°109.5°
H13C3H14109.5°109.4°
H15C2H16109.5°109.5°
H27C6'H28109.5°109.5°
H30C5AH31109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O7C7C6N8176.7°179.9°
O7C7C6S557.5°61.5°
O7C7C6C10177.9°179.9°
O7C7N8C1119.6°0.1°
O7C7N8C9161.1°179.8°
O7C7C6H1063.0°61.4°
C7C6S5C10115.8°114.2°
C7C6S5H10122.5°122.9°
C7C6C10H10119.1°118.5°
C7C6S5C439.7°66.5°
C6C7N8C11163.7°180.0°
C6C7N8C922.1°0.3°
C7C6C10C911.6°0.0°
C7C6C10H8130.7°118.5°
C7C6C10H9107.5°118.7°
N8C7C6S5125.8°118.4°
N8C7C6C105.4°0.2°
C7N8C11C9136.9°179.7°
C7N8C11C1281.1°89.7°
C7N8C9C1030.0°0.3°
C7N8C9O9149.2°179.7°
C7N8C11H6157.5°150.3°
C7N8C11H740.4°30.3°
N8C7C6H10113.7°118.7°
S5C6C10H10119.7°122.9°
C6S5C4C384.1°180.0°
S5C6C10C9109.6°118.6°
S5C6C10H89.5°122.9°
S5C6C10H9131.3°0.1°
C6S5C4H1136.9°60.0°
C6S5C4H12154.9°60.0°
C10C6S5C476.0°179.3°
C6C10C9N825.4°0.2°
C6C10C9H8119.1°118.4°
C6C10C9H9119.1°118.9°
C6C10C9O9153.8°179.9°
C6C10H8H9122.7°123.1°
S5C4C3H11121.0°120.0°
S5C4C3H12121.0°120.0°
S5C4C3C2175.6°180.0°
C4S5C6H10162.2°56.4°
S5C4H11H12116.9°120.0°
S5C4C3H1364.7°60.0°
S5C4C3H1455.9°60.0°
N8C11C12H6121.4°120.0°
N8C11C12H7121.4°120.0°
N8C11C12C1392.3°90.0°
C11N8C9C10170.8°180.0°
N8C11C12C1790.6°90.0°
C11N8C9O98.4°0.0°
N8C11H6H7115.4°119.9°
C9N8C11C1255.9°90.0°
N8C9C10O9179.2°180.0°
C9N8C11H665.5°30.0°
C9N8C11H7177.3°150.0°
N8C9C10H8144.5°118.5°
N8C9C10H993.7°118.7°
C11C12C13C17177.1°179.9°
C11C12C13C14178.6°180.0°
C11C12C17C16178.1°180.0°
C11C12C13H11.4°0.2°
C11C12C17H51.9°0.0°
C12C11H6H7115.4°120.1°
C4C3C2H13119.7°120.0°
C4C3C2H14119.7°120.0°
C4C3C2C1168.5°180.0°
C3C4H11H12116.9°120.0°
C4C3H13H14120.9°120.0°
C4C3C2H1547.6°60.0°
C4C3C2H1670.5°60.0°
C12C13C14H1180.0°179.8°
C12C13C14C150.8°0.1°
C13C12C17C161.0°0.0°
C12C13C14H2179.2°180.0°
C13C12C17H5179.0°180.0°
C13C12C11H6146.3°150.0°
C13C12C11H729.2°29.9°
C14C13C12C171.4°0.1°
C13C14C15H2180.0°179.8°
C13C14C15C160.2°0.1°
C13C14C15H3179.8°180.0°
C9C10H8H9122.7°122.8°
C9C10C6H10130.7°118.5°
C12C17C16H5180.0°180.0°
C12C17C16C150.1°0.0°
C17C12C13H1178.6°179.7°
C12C17C16H4180.0°179.9°
C17C12C11H630.8°29.9°
C17C12C11H7147.9°150.0°
C14C15C16C170.6°0.0°
C14C15C16H3180.0°179.9°
C15C14C13H1179.2°179.7°
C14C15C16H4179.4°179.9°
O9C9C10H834.7°61.5°
O9C9C10H987.1°61.3°
C3C2C1H15121.0°120.0°
C3C2C1H16121.0°120.0°
C3C2C1N1151.4°180.0°
C3C2C1N231.0°0.1°
C2C3C4H1154.6°60.0°
C2C3C4H1263.4°60.0°
C2C3H13H14121.0°120.0°
C3C2H15H16117.0°120.0°
C2C1N1N2177.6°179.9°
C2C1N1C1'179.9°179.9°
C1C2C3H1371.8°60.0°
C1C2C3H1448.9°60.0°
C1C2H15H16116.9°120.0°
C2C1N2H17177.5°180.0°
C2C1N1H180.1°0.0°
C17C16C15H4180.0°179.9°
C17C16C15H3179.4°179.9°
C16C15C14H2179.8°179.9°
C15C16C17H5180.0°180.0°
C1N1C1'H18180.0°179.9°
C1N1C1'O5'42.0°95.0°
C1N1C1'C2'87.4°145.1°
N1C1C2H1587.7°60.0°
N1C1C2H1630.4°60.0°
N1C1N2H170.0°0.0°
C1N1C1'H19158.0°25.0°
N2C1N1C1'2.3°0.0°
N2C1C2H1590.0°119.9°
N2C1C2H16152.0°120.0°
N2C1N1H18177.7°179.9°
O4AC4AC5AC3A122.5°120.0°
O4AC4AC5AH32119.6°120.2°
O4AC4AC3AH32120.7°120.2°
O4AC4AC5AO5A179.4°177.6°
O4AC4AC3AO3A60.9°63.2°
O4AC4AC3AC2A179.5°176.9°
O4AC4AC5AH3059.2°62.5°
O4AC4AC5AH3160.4°57.5°
O4AC4AC3AH3461.2°57.0°
N1C1'O5'C2'123.5°119.9°
N1C1'O5'H19115.9°120.1°
N1C1'C2'H19115.4°120.1°
N1C1'O5'C5'152.5°178.9°
N1C1'C2'O2'90.2°62.6°
N1C1'C2'C3'147.8°177.5°
N1C1'C2'H2028.7°57.6°
C5AC4AC3AH32117.9°119.9°
C4AC5AO5AH30120.2°120.0°
C4AC5AO5AH31120.2°120.1°
C5AC4AC3AO3A177.6°176.9°
C4AC5AO5AC1A57.1°61.2°
C5AC4AC3AC2A58.0°57.0°
C4AC5AH30H31119.2°120.1°
C5AC4AO4AH33180.0°60.0°
C5AC4AC3AH3460.2°62.9°
C3AC4AC5AO5A56.9°57.6°
C4AC3AO3AC2A118.9°119.6°
C4AC3AO3AH34121.4°120.2°
C4AC3AC2AH34118.2°119.9°
C4AC3AC2AC1A59.4°57.0°
C4AC3AC2AO2A178.5°176.9°
C3AC4AC5AH3063.3°177.6°
C3AC4AC5AH31177.1°62.4°
C3AC4AO4AH3358.7°179.7°
C4AC3AO3AH35180.0°60.0°
C4AC3AC2AH3658.5°63.0°
C5AO5AC1AC2A57.9°61.2°
C5AO5AC1AO6'172.3°178.9°
C5AO5AC1AH2964.4°58.9°
O5AC5AH30H31119.3°120.0°
O5AC5AC4AH3261.0°62.2°
O3AC3AC2AH34120.5°120.3°
O3AC3AC2AC1A179.3°176.9°
O3AC3AC2AO2A57.2°63.3°
O3AC3AC4AH3259.7°57.0°
O3AC3AC2AH3662.8°56.9°
O5AC1AC2AC3A59.2°57.7°
O5AC1AC2AO6'117.0°119.9°
O5AC1AC2AH29123.1°120.0°
O5AC1AC2AO2A178.5°177.5°
O5AC1AO6'H29123.0°120.0°
O5AC1AO6'C6'91.6°65.1°
C1AO5AC5AH3063.2°178.8°
C1AO5AC5AH31177.3°58.9°
O5AC1AC2AH3658.7°62.3°
C3AC2AC1AO2A122.3°119.8°
C3AC2AC1AH36117.9°120.0°
C3AC2AO2AH36119.3°120.2°
C3AC2AC1AO6'176.2°177.6°
C3AC2AC1AH2963.9°62.3°
C2AC3AC4AH3259.9°62.9°
C2AC3AO3AH3561.1°179.5°
C3AC2AO2AH37180.0°180.0°
O5'C1'C2'H19121.4°120.0°
O5'C1'C2'O2'146.5°177.5°
O5'C1'C2'C3'24.6°57.6°
C1'O5'C5'C6'168.2°178.8°
C1'O5'C5'C4'50.6°61.1°
O5'C1'N1H18138.0°85.0°
O5'C1'C2'H2094.6°62.3°
C1'O5'C5'H2670.7°58.8°
C2'C1'O5'C5'29.1°61.2°
C1'C2'O2'C3'124.4°119.6°
C1'C2'O2'H20118.0°120.2°
C1'C2'C3'H20119.0°119.9°
C1'C2'C3'C4'43.4°57.0°
C1'C2'C3'O3'164.4°176.9°
C2'C1'N1H1892.6°34.9°
C1'C2'O2'H21180.0°60.0°
C1'C2'C3'H2275.0°62.9°
C1AC2AO2AH36119.0°120.2°
C2AC1AO6'H29118.9°120.1°
C2AC1AO6'C6'150.3°175.0°
C1AC2AC3AH3458.8°62.8°
C1AC2AO2AH3758.3°60.3°
O2AC2AC1AO6'61.5°62.6°
O2AC2AC1AH2958.5°57.5°
O2AC2AC3AH3463.3°57.0°
O5'C5'C6'O6'52.9°65.0°
O5'C5'C6'C4'115.7°120.0°
O5'C5'C6'H26121.8°120.0°
O5'C5'C4'H26122.1°120.0°
O5'C5'C4'C3'69.9°57.6°
O5'C5'C4'O4'168.8°177.5°
C5'O5'C1'H1991.6°58.8°
O5'C5'C4'H2447.6°62.4°
O5'C5'C6'H27171.6°175.0°
O5'C5'C6'H2865.9°55.0°
C1AO6'C6'C5'177.1°179.9°
C1AO6'C6'H2758.4°60.1°
C1AO6'C6'H2864.1°60.0°
O6'C1AC2AH3658.3°57.6°
O6'C6'C5'H27118.8°120.0°
O6'C6'C5'H28118.8°120.0°
O6'C6'C5'C4'62.8°175.0°
O6'C6'C5'H26174.6°55.0°
O6'C6'H27H28123.5°120.0°
C6'O6'C1AH2931.4°54.9°
O2'C2'C3'H20118.5°120.2°
O2'C2'C3'C4'165.9°176.8°
O2'C2'C3'O3'73.1°63.3°
O2'C2'C1'H1925.1°57.5°
O2'C2'C3'H2247.5°56.9°
C2'C3'C4'C5'67.2°57.0°
C2'C3'C4'O3'120.0°119.8°
C2'C3'C4'H22118.4°119.8°
C2'C3'C4'O4'171.7°176.9°
C2'C3'O3'H22119.7°120.1°
C3'C2'C1'H1996.8°62.3°
C3'C2'O2'H2155.6°179.7°
C2'C3'O3'H23180.0°60.0°
C2'C3'C4'H2450.4°63.1°
C6'C5'C4'H26122.7°120.0°
C6'C5'C4'C3'174.9°177.6°
C6'C5'C4'O4'53.6°62.5°
C6'C5'C4'H2467.6°57.7°
C5'C6'H27H28123.5°120.0°
C5'C4'C3'O4'121.1°119.9°
C5'C4'C3'H24117.5°120.0°
C5'C4'O4'H24120.4°120.2°
C5'C4'C3'O3'172.8°176.8°
C5'C4'C3'H2251.2°62.9°
C5'C4'O4'H25180.0°179.7°
C4'C5'C6'H2755.9°55.0°
C4'C5'C6'H28178.4°65.0°
C3'C4'O4'H24120.6°120.1°
C4'C3'O3'H22120.8°120.3°
C4'C3'C2'H2075.6°63.0°
C4'C3'O3'H2360.6°179.6°
C3'C4'O4'H2561.1°60.0°
C3'C4'C5'H2652.2°62.4°
O4'C4'C3'O3'51.8°63.3°
O4'C4'C3'H2269.8°57.1°
O4'C4'C5'H2669.1°57.5°
O3'C3'C2'H2045.4°56.9°
O3'C3'C4'H2469.6°56.8°
H1C13C14H20.8°0.2°
H2C14C15H30.2°0.1°
H3C15C16H40.6°0.1°
H4C16C17H50.0°0.1°
H8C10C6H10110.2°0.0°
H9C10C6H1011.6°122.8°
H11C4C3H13174.3°179.9°
H11C4C3H1465.1°60.0°
H12C4C3H1356.2°60.0°
H12C4C3H14176.9°180.0°
H13C3C2H15167.2°180.0°
H13C3C2H1649.2°60.0°
H14C3C2H1572.1°60.0°
H14C3C2H16169.8°180.0°
H18N1C1'H1922.0°155.0°
H19C1'C2'H20144.0°177.7°
H20C2'O2'H2162.1°60.1°
H20C2'C3'H22165.9°177.1°
H22C3'O3'H2360.3°60.1°
H22C3'C4'H24168.8°177.1°
H24C4'O4'H2559.5°60.1°
H24C4'C5'H26169.7°177.7°
H26C5'C6'H2766.6°65.0°
H26C5'C6'H2855.8°175.0°
H29C1AC2AH36178.2°177.7°
H30C5AC4AH32178.7°57.7°
H31C5AC4AH3259.2°177.7°
H32C4AO4AH3361.3°60.2°
H32C4AC3AH34178.1°177.2°
H34C3AO3AH3558.6°60.2°
H34C3AC2AH36176.7°177.2°
H36C2AO2AH3760.8°59.9°

247947

PDB entries from 2026-01-21

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