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ZNB

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N6NC6Nsing1.38Å1.31Å
BR8C8Nsing1.89Å1.90Å
N7NC8Ndoub1.30Å1.31ÅAromatic
N7NC5Nsing1.36Å1.31ÅAromatic
C8NN9Nsing1.36Å1.33ÅAromatic
C6NC5Ndoub1.40Å1.39ÅAromatic
C6NN1Nsing1.33Å1.31ÅAromatic
C5NC4Nsing1.41Å1.37ÅAromatic
C2'O2'sing1.43Å1.39Å
C2'C3'sing1.55Å1.52Å
C2'C1'sing1.55Å1.51Å
N1NC2Ndoub1.32Å1.31ÅAromatic
N9NC4Nsing1.37Å1.31ÅAromatic
N9NC1'sing1.46Å1.49Å
O3'C3'sing1.43Å1.42Å
C4NN3Ndoub1.33Å1.32ÅAromatic
C3'C4'sing1.54Å1.50Å
C2NN3Nsing1.32Å1.30ÅAromatic
C1'O4'sing1.44Å1.41Å
O4'C4'sing1.44Å1.40Å
C4'C5'sing1.53Å1.54Å
C5'N5'sing1.47Å1.44Å
N6AC6Asing1.39Å1.30Å
N53N52doub1.12Å1.29Å
N5'C83sing1.35Å1.30Å
C6AN1Adoub1.33Å1.32ÅAromatic
C6AC5Asing1.40Å1.39ÅAromatic
N52N51doub1.12Å1.27Å
N1AC2Asing1.32Å1.31ÅAromatic
C5AN7Asing1.36Å1.31ÅAromatic
C5AC4Adoub1.40Å1.37ÅAromatic
N7AC8Adoub1.31Å1.31ÅAromatic
N51C5sing1.47Å1.46Å
C2AN3Adoub1.32Å1.30ÅAromatic
C4AN3Asing1.33Å1.33ÅAromatic
C4AN9Asing1.38Å1.31ÅAromatic
C8AS81sing1.76Å1.76Å
C8AN9Asing1.37Å1.34ÅAromatic
C83O83doub1.21Å1.22Å
C83C82sing1.51Å1.53Å
S81C82sing1.81Å1.83Å
O4C1sing1.44Å1.41Å
O4C4sing1.44Å1.38Å
N9AC1sing1.46Å1.47Å
C5C4sing1.53Å1.50Å
C1C3sing1.54Å1.50Å
C4C2sing1.54Å1.52Å
C3C2sing1.54Å1.52Å
C3O3sing1.43Å1.41Å
C2O2sing1.43Å1.41Å
C5H2sing1.09Å1.10Å
C5H3sing1.09Å1.10Å
C4H4sing1.09Å1.10Å
C2H5sing1.09Å1.10Å
O2H6sing0.97Å0.95Å
C3H7sing1.09Å1.10Å
O3H8sing0.97Å0.95Å
C1H9sing1.09Å1.10Å
C2AH10sing1.08Å1.08Å
N6AH11sing0.97Å1.00Å
N6AH12sing0.97Å1.00Å
C82H13sing1.09Å1.10Å
C82H14sing1.09Å1.10Å
N5'H15sing0.97Å1.00Å
C5'H16sing1.09Å1.10Å
C5'H17sing1.09Å1.10Å
C4'H18sing1.09Å1.10Å
C3'H19sing1.09Å1.10Å
O3'H20sing0.97Å0.95Å
C2'H21sing1.09Å1.10Å
O2'H22sing0.97Å0.95Å
C1'H23sing1.09Å1.10Å
C2NH24sing1.08Å1.08Å
N6NH25sing0.97Å1.00Å
N6NH26sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N6NC6NC5N122.7°120.8°
N6NC6NN1N119.8°120.7°
C6NN6NH25109.5°119.9°
C6NN6NH26109.5°120.0°
BR8C8NN7N120.0°125.0°
BR8C8NN9N130.0°125.0°
C8NN7NC5N107.9°109.4°
N7NC8NN9N110.0°110.0°
N7NC5NC6N133.5°134.6°
N7NC5NC4N107.3°107.2°
C8NN9NC4N106.9°107.4°
C8NN9NC1'130.0°126.3°
C5NC6NN1N117.5°118.5°
C6NC5NC4N119.2°118.2°
C6NN1NC2N121.3°121.2°
C5NC4NN9N107.9°106.0°
C5NC4NN3N119.6°119.1°
O2'C2'C3'110.5°110.9°
O2'C2'C1'106.6°111.0°
O2'C2'H21113.1°110.8°
C2'O2'H22109.5°114.1°
C3'C2'C1'103.8°102.1°
C2'C3'O3'113.7°110.6°
C2'C3'C4'97.8°104.2°
C2'C3'H19111.1°110.5°
C3'C2'H21111.1°110.8°
C2'C1'N9N114.3°110.6°
C2'C1'O4'106.0°103.5°
C1'C2'H21111.2°110.9°
C2'C1'H23107.9°110.6°
N1NC2NN3N123.3°122.5°
N1NC2NH24118.4°118.8°
C4NN9NC1'123.0°126.3°
N9NC4NN3N132.5°134.9°
N9NC1'O4'111.0°110.7°
N9NC1'H23108.2°110.7°
O3'C3'C4'109.2°110.5°
O3'C3'H19112.6°110.4°
C3'O3'H20109.5°114.0°
C4NN3NC2N119.0°120.6°
C3'C4'O4'103.7°107.4°
C3'C4'C5'115.3°109.8°
C3'C4'H18108.6°109.9°
C4'C3'H19111.4°110.5°
N3NC2NH24118.4°118.7°
C1'O4'C4'106.2°107.0°
O4'C1'H23109.3°110.6°
O4'C4'C5'111.3°109.9°
O4'C4'H18109.9°109.9°
C4'C5'N5'96.5°109.4°
C4'C5'H16112.6°109.5°
C4'C5'H17112.6°109.4°
C5'C4'H18108.0°109.9°
C5'N5'C83132.3°120.0°
C5'N5'H15113.9°120.0°
N5'C5'H16112.6°109.5°
N5'C5'H17112.6°109.4°
N6AC6AN1A119.3°120.7°
N6AC6AC5A122.2°120.8°
C6AN6AH11109.5°120.0°
C6AN6AH12109.5°120.0°
N53N52N51177.3°180.0°
N5'C83O83126.6°120.0°
N5'C83C82108.9°119.9°
C83N5'H15113.9°120.1°
N1AC6AC5A118.5°118.5°
C6AN1AC2A121.8°121.2°
C6AC5AN7A135.5°134.5°
C6AC5AC4A117.4°118.2°
N52N51C5122.7°119.9°
N1AC2AN3A121.6°122.4°
N1AC2AH10119.2°118.8°
N7AC5AC4A107.1°107.3°
C5AN7AC8A108.6°109.4°
C5AC4AN3A120.6°119.1°
C5AC4AN9A108.0°106.2°
N7AC8AS81118.0°125.1°
N7AC8AN9A109.0°109.7°
N51C5C4108.5°109.5°
N51C5H2109.7°109.5°
N51C5H3109.7°109.5°
C2AN3AC4A120.1°120.7°
N3AC2AH10119.2°118.7°
N3AC4AN9A131.4°134.7°
C4AN9AC8A107.2°107.4°
C4AN9AC1116.4°126.3°
S81C8AN9A132.9°125.2°
C8AS81C82112.3°100.0°
C8AN9AC1136.3°126.3°
O83C83C82124.3°120.1°
C83C82S81108.0°109.4°
C83C82H13109.8°109.5°
C83C82H14109.8°109.5°
S81C82H13109.9°109.5°
S81C82H14109.8°109.5°
C1O4C4102.6°105.3°
O4C1N9A114.1°110.4°
O4C1C3103.7°104.8°
O4C1H9105.1°110.3°
O4C4C5103.1°110.4°
O4C4C2104.2°104.8°
O4C4H4115.2°110.4°
N9AC1C3123.7°110.4°
N9AC1H9104.4°110.4°
C5C4C2107.6°110.4°
C4C5H2109.7°109.5°
C4C5H3109.7°109.5°
C5C4H4113.0°110.3°
C1C3C298.9°104.1°
C1C3O3108.1°110.5°
C1C3H7113.5°110.6°
C3C1H9104.2°110.4°
C4C2C3105.2°104.1°
C4C2O2107.0°110.6°
C2C4H4112.7°110.4°
C4C2H5111.6°110.5°
C2C3O3106.6°110.5°
C3C2O2107.4°110.5°
C3C2H5111.7°110.6°
C2C3H7113.2°110.6°
O3C3H7115.1°110.4°
C3O3H8109.5°114.1°
O2C2H5113.4°110.5°
C2O2H6109.5°114.0°
H2C5H3109.5°109.4°
H11N6AH12109.5°120.0°
H13C82H14109.5°109.5°
H16C5'H17109.4°109.5°
H25N6NH26109.5°120.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N6NC6NC5NN7N0.9°0.0°
N6NC6NC5NN1N179.4°179.9°
N6NC6NC5NC4N180.0°180.0°
N6NC6NN1NC2N179.8°179.8°
C6NN6NH25H26120.0°180.0°
BR8C8NN7NN9N179.0°180.0°
BR8C8NN7NC5N179.1°180.0°
BR8C8NN9NC4N179.0°180.0°
BR8C8NN9NC1'1.7°0.2°
C8NN7NC5NC6N179.2°180.0°
C8NN7NC5NC4N0.1°0.0°
N7NC8NN9NC4N0.2°0.0°
N7NC8NN9NC1'179.5°179.8°
C5NN7NC8NN9N0.2°0.0°
N7NC5NC6NC4N179.1°180.0°
N7NC5NC6NN1N179.8°179.9°
N7NC5NC4NN9N0.1°0.0°
N7NC5NC4NN3N179.6°179.8°
C8NN9NC4NC5N0.2°0.0°
C8NN9NC1'C2'56.1°74.7°
C8NN9NC4NC1'179.3°179.8°
C8NN9NC4NN3N179.7°179.8°
C8NN9NC1'O4'63.7°39.4°
C8NN9NC1'H23176.4°162.3°
C5NC6NN1NC2N0.4°0.3°
C6NC5NC4NN9N179.2°180.0°
C6NC5NC4NN3N0.3°0.2°
C5NC6NN6NH25179.3°0.0°
C5NC6NN6NH2659.3°180.0°
N1NC6NC5NC4N0.7°0.1°
C6NN1NC2NN3N0.1°0.3°
C6NN1NC2NH24179.9°179.7°
N1NC6NN6NH250.0°179.9°
N1NC6NN6NH26120.0°0.1°
C5NC4NN9NN3N179.5°179.8°
C5NC4NN9NC1'179.5°179.8°
C5NC4NN3NC2N0.2°0.2°
O2'C2'C3'C1'114.0°118.3°
O2'C2'C3'H21126.4°123.5°
O2'C2'C1'H21123.7°123.7°
O2'C2'C1'N9N129.6°86.3°
O2'C2'C3'O3'33.7°20.4°
O2'C2'C3'C4'81.4°139.1°
O2'C2'C1'O4'107.8°155.2°
O2'C2'C3'H19161.9°102.2°
O2'C2'C1'H239.2°36.7°
C3'C2'C1'H21119.5°118.1°
C3'C2'C1'N9N113.6°155.5°
C2'C3'O3'C4'108.1°114.8°
C2'C3'O3'H19127.5°122.6°
C2'C3'C4'H19116.4°118.7°
C3'C2'C1'O4'9.0°36.9°
C2'C3'C4'O4'46.6°2.0°
C2'C3'C4'C5'168.5°121.5°
C2'C3'C4'H1870.2°117.5°
C2'C3'O3'H20180.0°65.2°
C3'C2'O2'H22180.0°61.4°
C3'C2'C1'H23125.9°81.5°
C2'C1'N9NC4N124.7°105.0°
C2'C1'N9NO4'119.8°114.1°
C2'C1'N9NH23120.3°122.9°
C1'C2'C3'O3'147.7°97.9°
C1'C2'C3'C4'32.6°20.8°
C2'C1'O4'H23116.0°118.5°
C2'C1'O4'C4'21.0°39.9°
C1'C2'C3'H1984.1°139.5°
C1'C2'O2'H2267.8°174.1°
N1NC2NN3NC4N0.5°0.0°
N1NC2NN3NH24180.0°179.9°
N9NC4NN3NC2N179.7°180.0°
C4NN9NC1'O4'115.5°140.9°
C4NN9NC1'H234.4°17.9°
C1'N9NC4NN3N1.0°0.0°
N9NC1'O4'H23119.3°123.0°
N9NC1'O4'C4'145.6°158.4°
N9NC1'C2'H215.9°37.4°
O3'C3'C4'H19125.1°122.5°
O3'C3'C4'O4'165.1°120.8°
O3'C3'C4'C5'73.0°119.8°
O3'C3'C4'H1848.3°1.2°
O3'C3'C2'H2192.7°144.0°
C4NN3NC2NH24179.5°179.9°
C3'C4'O4'C1'43.7°26.5°
C3'C4'O4'C5'124.5°119.5°
C3'C4'O4'H18115.9°119.5°
C3'C4'C5'H18121.6°121.0°
C3'C4'C5'N5'148.6°175.3°
C3'C4'C5'H1630.9°64.7°
C3'C4'C5'H1793.5°55.4°
C4'C3'O3'H2071.9°180.0°
C4'C3'C2'H21152.2°97.3°
C1'O4'C4'C5'168.2°145.9°
C1'O4'C4'H1872.2°93.1°
O4'C1'C2'H21128.5°81.2°
O4'C4'C5'H18120.7°121.0°
O4'C4'C5'N5'93.7°66.7°
O4'C4'C5'H16148.5°53.3°
O4'C4'C5'H1724.2°173.3°
O4'C4'C3'H1969.8°116.7°
C4'O4'C1'H2395.1°78.6°
C4'C5'N5'H16117.8°120.0°
C4'C5'N5'H17117.8°119.9°
C4'C5'N5'C83148.3°180.0°
C4'C5'N5'H1531.7°0.1°
C4'C5'H16H17126.1°120.0°
C5'C4'C3'H1952.1°2.7°
C5'N5'C83H15180.0°179.9°
C5'N5'C83O839.6°0.1°
C5'N5'C83C82174.7°180.0°
N5'C5'H16H17126.1°120.0°
N5'C5'C4'H1827.1°54.2°
N6AC6AN1AC5A178.9°179.9°
N6AC6AN1AC2A179.9°180.0°
N6AC6AC5AN7A0.4°0.0°
N6AC6AC5AC4A179.2°180.0°
C6AN6AH11H12120.0°179.9°
N53N52N51C5177.5°140.3°
N5'C83O83C82175.0°180.0°
N5'C83C82S8136.5°180.0°
N5'C83C82H13156.3°60.0°
N5'C83C82H1483.3°60.1°
C83N5'C5'H1693.9°59.9°
C83N5'C5'H1730.5°60.1°
N1AC6AC5AN7A179.3°179.9°
N1AC6AC5AC4A0.4°0.0°
C6AN1AC2AN3A1.1°0.1°
C6AN1AC2AH10178.9°180.0°
N1AC6AN6AH110.0°0.1°
N1AC6AN6AH12120.0°180.0°
C5AC6AN1AC2A1.2°0.1°
C6AC5AN7AC4A179.7°180.0°
C6AC5AN7AC8A178.6°179.7°
C6AC5AC4AN3A0.5°0.0°
C6AC5AC4AN9A179.9°180.0°
C5AC6AN6AH11178.8°179.9°
C5AC6AN6AH1258.8°0.0°
N52N51C5C4171.2°120.0°
N52N51C5H268.9°120.0°
N52N51C5H351.4°0.1°
N1AC2AN3AH10180.0°179.9°
N1AC2AN3AC4A0.2°0.1°
N7AC5AC4AN3A179.7°180.0°
N7AC5AC4AN9A0.4°0.0°
C5AN7AC8AS81178.2°180.0°
C5AN7AC8AN9A2.1°0.4°
C4AC5AN7AC8A1.1°0.2°
C5AC4AN3AC2A0.6°0.0°
C5AC4AN3AN9A179.2°179.9°
C5AC4AN9AC8A1.6°0.2°
C5AC4AN9AC1179.5°180.0°
N7AC8AN9AC4A2.3°0.4°
N7AC8AS81N9A175.0°179.6°
N7AC8AS81C82175.2°0.0°
N7AC8AN9AC1179.5°179.8°
N51C5C4O424.2°69.5°
N51C5C4H2119.8°120.0°
N51C5C4H3119.9°120.1°
N51C5C4C2133.9°175.0°
N51C5H2H3120.5°120.0°
N51C5C4H4100.9°52.8°
C2AN3AC4AN9A179.8°180.0°
N3AC4AN9AC8A179.1°179.7°
N3AC4AN9AC11.3°0.1°
C4AN3AC2AH10179.8°180.0°
C4AN9AC8AS81177.7°180.0°
C4AN9AC8AC1177.2°179.8°
C4AN9AC1O4112.9°136.4°
C4AN9AC1C3119.6°108.1°
C4AN9AC1H91.3°14.2°
C8AS81C82C83124.0°180.0°
S81C8AN9AC15.1°0.2°
C8AS81C82H13116.3°60.0°
C8AS81C82H144.2°60.0°
N9AC8AS81C829.7°179.6°
C8AN9AC1O464.1°43.3°
C8AN9AC1C363.4°72.1°
C8AN9AC1H9178.3°165.5°
O83C83C82S81139.3°0.0°
O83C83C82H1319.5°120.0°
O83C83C82H14100.9°120.0°
O83C83N5'H15170.4°180.0°
C83C82S81H13119.8°120.0°
C83C82S81H14119.8°120.0°
C83C82H13H14120.7°120.0°
C82C83N5'H155.2°0.1°
S81C82H13H14120.7°120.0°
O4C1N9AC3127.5°115.4°
O4C1N9AH9114.2°122.2°
C1O4C4C5153.7°159.3°
O4C1C3H9109.7°118.7°
C1O4C4C241.4°40.4°
O4C1C3C239.3°24.0°
O4C1C3O3150.2°142.6°
C1O4C4H482.6°78.4°
O4C1C3H780.9°94.8°
C4O4C1N9A170.4°159.4°
O4C4C5C2109.7°115.4°
O4C4C5H4125.1°122.3°
C4O4C1C352.4°40.5°
O4C4C2H4125.6°118.9°
O4C4C2C315.9°23.9°
O4C4C2O2130.0°142.6°
O4C4C5H295.6°50.4°
O4C4C5H3144.1°170.4°
O4C4C2H5105.4°94.8°
C4O4C1H956.6°78.3°
N9AC1C3H9118.4°122.4°
N9AC1C3C2171.2°142.9°
N9AC1C3O378.0°98.5°
N9AC1C3H751.0°24.1°
C5C4C2H4125.3°122.2°
C5C4C2C3125.0°142.8°
C5C4C2O2121.0°98.5°
C4C5H2H3120.4°120.0°
C5C4C2H53.7°24.1°
C1C3C2C414.0°0.0°
C1C3C2O3112.0°118.7°
C1C3C2H7120.4°118.8°
C1C3O3H7128.1°122.7°
C1C3C2O299.8°118.7°
C1C3C2H5135.3°118.7°
C1C3O3H8180.0°176.1°
C4C2C3O2113.8°118.7°
C4C2C3H5121.3°118.7°
C4C2C3O3126.0°118.7°
C4C2O2H5123.6°122.6°
C2C4C5H214.1°65.0°
C2C4C5H3106.2°54.9°
C4C2O2H6180.0°61.4°
C4C2C3H7106.4°118.8°
C2C3O3H7126.5°122.6°
C3C2O2H5123.9°122.7°
C3C2C4H4109.7°95.0°
C3C2O2H667.4°176.1°
C2C3O3H874.5°61.5°
C2C3C1H970.4°94.8°
O3C3C2O212.2°0.0°
O3C3C2H5112.7°122.7°
O3C3C1H940.5°23.8°
O2C2C4H44.3°23.7°
O2C2C3H7139.8°122.5°
H2C5C4H4139.3°172.8°
H3C5C4H419.0°67.3°
H4C4C2H5129.0°146.3°
H5C2O2H656.5°61.2°
H5C2C3H714.8°0.1°
H7C3O3H851.9°61.2°
H7C3C1H9169.4°146.4°
H15N5'C5'H1686.2°120.0°
H15N5'C5'H17149.5°120.0°
H16C5'C4'H1890.7°174.3°
H17C5'C4'H18144.9°65.7°
H18C4'C3'H19173.4°123.8°
H19C3'O3'H2052.5°57.5°
H19C3'C2'H2135.5°21.4°
H21C2'O2'H2254.7°62.2°
H21C2'C1'H23114.6°160.4°

223532

PDB entries from 2024-08-07

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