Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

ZLD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2C5doub1.39Å1.41ÅAromatic
C2C1sing1.39Å1.49ÅAromatic
C2N4sing1.40Å1.48Å
C5C16sing1.38Å1.44ÅAromatic
C9C8sing1.53Å1.55Å
C9N11sing1.46Å1.48Å
C1C3doub1.38Å1.49ÅAromatic
C3C17sing1.39Å1.50ÅAromatic
N4C6sing1.47Å1.49Å
N4C7sing1.34Å1.37Å
C6C8sing1.54Å1.53Å
C7O10sing1.34Å1.38Å
C7O15doub1.22Å1.25Å
C8O10sing1.46Å1.43Å
N11C12sing1.35Å1.38Å
C12C13sing1.51Å1.51Å
C12O14doub1.21Å1.22Å
C16C17doub1.39Å1.51ÅAromatic
C16F18sing1.35Å1.36Å
C17N19sing1.40Å1.37Å
N19C20sing1.47Å1.54Å
N19C24sing1.47Å1.43Å
C20C21sing1.53Å1.61Å
C21O22sing1.43Å1.36Å
O22C23sing1.43Å1.42Å
C23C24sing1.53Å1.68Å
C5H5sing1.08Å1.08Å
C9H9sing1.09Å1.10Å
C9H9Asing1.09Å1.10Å
C1H1sing1.08Å1.08Å
C3H3sing1.08Å1.08Å
C6H6sing1.09Å1.10Å
C6H6Asing1.09Å1.10Å
C8H8sing1.09Å1.10Å
N11HN11sing0.97Å1.00Å
C13H13sing1.09Å1.10Å
C13H13Asing1.09Å1.10Å
C13H13Bsing1.09Å1.10Å
C20H20sing1.09Å1.10Å
C20H20Asing1.09Å1.10Å
C21H21sing1.09Å1.10Å
C21H21Asing1.09Å1.10Å
C23H23sing1.09Å1.10Å
C23H23Asing1.09Å1.10Å
C24H24sing1.09Å1.10Å
C24H24Asing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C5C2C1120.1°120.0°
C5C2N4119.8°120.0°
C2C5C16120.5°120.0°
C2C5H5119.7°120.0°
C1C2N4120.1°120.0°
C2C1C3118.2°120.0°
C2C1H1120.9°120.0°
C2N4C6120.4°125.5°
C2N4C7133.9°125.6°
C5C16C17126.0°119.9°
C5C16F18112.5°120.1°
C16C5H5119.7°120.0°
C8C9N11112.9°109.5°
C9C8C6124.0°110.5°
C9C8O10108.4°110.7°
C8C9H9108.3°109.5°
C8C9H9A107.6°109.5°
C9C8H898.5°110.5°
C9N11C12123.0°120.0°
N11C9H9108.4°109.5°
N11C9H9A107.5°109.4°
C9N11HN11118.5°120.0°
C1C3C17124.3°120.0°
C3C1H1120.9°120.0°
C1C3H3117.8°120.0°
C3C17C16111.0°120.0°
C3C17N19125.4°120.0°
C17C3H3117.9°120.0°
C6N4C7105.6°108.9°
N4C6C8104.5°103.8°
N4C6H6111.2°110.6°
N4C6H6A112.2°110.6°
N4C7O10114.2°113.9°
N4C7O15123.9°123.1°
C6C8O10105.4°104.0°
C8C6H6111.2°110.6°
C8C6H6A112.2°110.6°
C6C8H8101.9°110.5°
O10C7O15122.0°123.0°
C7O10C8108.0°109.4°
O10C8H8119.6°110.5°
N11C12C13113.6°120.0°
N11C12O14124.2°120.0°
C12N11HN11118.5°120.0°
C13C12O14122.2°120.0°
C12C13H13109.5°109.5°
C12C13H13A109.5°109.4°
C12C13H13B109.4°109.5°
C17C16F18121.5°120.0°
C16C17N19123.6°120.0°
C17N19C20119.5°111.0°
C17N19C24120.7°111.0°
C20N19C24113.7°110.7°
N19C20C21112.4°109.2°
N19C20H20108.5°109.5°
N19C20H20A107.9°109.6°
N19C24C23117.9°109.3°
N19C24H24106.7°109.5°
N19C24H24A104.8°109.5°
C20C21O22119.5°109.2°
C21C20H20108.5°109.5°
C21C20H20A107.9°109.5°
C20C21H21106.3°109.5°
C20C21H21A103.9°109.5°
C21O22C23106.7°113.7°
O22C21H21106.3°109.6°
O22C21H21A104.0°109.5°
O22C23C24109.1°109.3°
O22C23H23109.6°109.5°
O22C23H23A109.7°109.5°
C24C23H23109.6°109.5°
C24C23H23A109.7°109.5°
C23C24H24106.8°109.5°
C23C24H24A104.8°109.5°
H9C9H9A112.2°109.4°
H6C6H6A105.7°110.6°
H13C13H13A109.4°109.4°
H13C13H13B109.4°109.5°
H13AC13H13B109.5°109.5°
H20C20H20A111.7°109.5°
H21C21H21A117.7°109.6°
H23C23H23A109.2°109.5°
H24C24H24A116.3°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C5C2C1N4177.6°179.7°
C2C5C16H5180.0°180.0°
C5C2C1C30.0°0.0°
C5C2N4C6146.3°180.0°
C5C2N4C730.0°0.3°
C2C5C16C170.1°0.1°
C2C5C16F18177.8°180.0°
C5C2C1H1180.0°180.0°
C1C2C5C160.5°0.0°
C2C1C3H1180.0°179.9°
C2C1C3C171.0°0.1°
C1C2N4C631.3°0.3°
C1C2N4C7152.4°179.4°
C1C2C5H5179.5°180.0°
C2C1C3H3179.0°180.0°
N4C2C5C16178.1°179.7°
N4C2C1C3177.6°179.7°
C2N4C6C7177.2°179.8°
C2N4C6C8163.7°180.0°
C2N4C7O10169.3°180.0°
C2N4C7O1511.1°0.0°
N4C2C5H51.9°0.3°
N4C2C1H12.4°0.2°
C2N4C6H643.6°61.4°
C2N4C6H6A74.5°61.4°
C5C16C17C31.0°0.1°
C5C16C17F18177.7°179.9°
C5C16C17N19179.1°179.9°
C8C9N11H9120.0°120.1°
C8C9N11H9A118.5°120.0°
C9C8C6N4110.2°118.6°
C9C8C6O10125.4°118.8°
C9C8C6H8109.0°122.6°
C9C8O10C7123.4°118.7°
C9C8O10H8111.6°122.6°
C8C9N11C1288.9°180.0°
C8C9H9H9A118.6°120.0°
C9C8C6H69.8°0.0°
C9C8C6H6A127.9°122.8°
C8C9N11HN1191.1°0.1°
N11C9C8C677.6°179.9°
N11C9C8O1046.5°65.3°
C9N11C12HN11180.0°179.9°
C9N11C12C13180.0°179.9°
C9N11C12O140.3°0.1°
N11C9H9H9A118.6°120.0°
N11C9C8H8171.7°57.3°
C1C3C17H3180.0°180.0°
C1C3C17C161.4°0.0°
C1C3C17N19178.7°180.0°
C3C17C16N19179.9°180.0°
C3C17C16F18176.7°180.0°
C3C17N19C20137.7°60.0°
C3C17N19C2413.2°63.6°
C17C3C1H1179.0°180.0°
N4C6C8H6120.0°118.6°
N4C6C8H6A121.9°118.6°
C6N4C7O107.3°0.2°
C6N4C7O15172.3°179.7°
N4C6C8O1015.2°0.2°
N4C6H6H6A122.0°122.8°
N4C6C8H8140.8°118.8°
C7N4C6C813.5°0.2°
N4C7O10O15179.6°179.9°
N4C7O10C82.8°0.1°
C7N4C6H6133.6°118.9°
C7N4C6H6A108.3°118.3°
C6C8O10C711.3°0.1°
C6C8O10H8113.8°118.6°
C6C8C9H942.4°60.0°
C6C8C9H9A163.9°60.0°
C8C6H6H6A122.0°122.8°
C7O10C8H8125.0°118.7°
O15C7O10C8177.7°179.9°
O10C8C9H9166.5°54.8°
O10C8C9H9A72.0°174.7°
O10C8C6H6135.2°118.8°
O10C8C6H6A106.7°118.4°
N11C12C13O14179.7°180.0°
C12N11C9H931.1°59.9°
C12N11C9H9A152.6°60.1°
N11C12C13H1375.9°90.1°
N11C12C13H13A164.1°150.0°
N11C12C13H13B44.1°30.0°
C13C12N11HN110.0°0.1°
C12C13H13H13A120.0°119.9°
C12C13H13H13B120.0°120.0°
C12C13H13AH13B120.0°120.0°
O14C12N11HN11179.7°180.0°
O14C12C13H13103.9°90.0°
O14C12C13H13A16.1°30.0°
O14C12C13H13B136.2°150.0°
C16C17N19C2042.4°120.0°
C16C17N19C24166.7°116.4°
C17C16C5H5180.0°180.0°
C16C17C3H3178.6°180.0°
F18C16C17N193.2°0.0°
F18C16C5H52.2°0.0°
C17N19C20C24152.8°123.8°
C17N19C20C21178.6°177.6°
C17N19C24C23175.7°177.6°
N19C17C3H31.3°0.1°
C17N19C20H2061.4°57.7°
C17N19C20H20A59.8°62.5°
C17N19C24H2464.3°62.4°
C17N19C24H24A59.7°57.7°
N19C20C21H20120.0°119.9°
N19C20C21H20A118.8°120.0°
N19C20C21O2243.7°56.9°
C20N19C24C2331.8°58.7°
N19C20H20H20A118.8°120.2°
N19C20C21H2176.2°63.1°
N19C20C21H21A158.9°176.8°
C20N19C24H2488.2°61.3°
C20N19C24H24A147.9°178.6°
C24N19C20C2125.8°58.7°
N19C24C23O2251.0°56.9°
N19C24C23H24120.0°120.0°
N19C24C23H24A116.0°119.9°
C24N19C20H20145.8°178.6°
C24N19C20H20A93.0°61.3°
N19C24C23H2369.0°63.0°
N19C24C23H23A171.2°176.8°
N19C24H24H24A116.5°120.1°
C20C21O22H21120.0°119.9°
C20C21O22H21A115.2°119.9°
C20C21O22C2363.1°58.7°
C21C20H20H20A118.8°120.1°
C20C21H21H21A115.9°120.1°
C21O22C23C2461.4°58.7°
O22C21C20H20163.8°176.8°
O22C21C20H20A75.0°63.1°
O22C21H21H21A115.9°120.2°
C21O22C23H2358.6°61.2°
C21O22C23H23A178.4°178.6°
O22C23C24H23120.0°119.9°
O22C23C24H23A120.2°119.9°
C23O22C21H2156.9°61.2°
C23O22C21H21A178.2°178.6°
O22C23H23H23A120.1°120.1°
O22C23C24H2468.9°63.1°
O22C23C24H24A167.1°176.8°
C24C23H23H23A120.2°120.2°
C23C24H24H24A116.6°120.1°
H9C9C8H868.3°177.4°
H9C9N11HN11148.9°120.0°
H9AC9C8H853.2°62.6°
H9AC9N11HN1127.4°120.1°
H1C1C3H31.0°0.1°
H6C6C8H899.2°122.7°
H6AC6C8H818.9°0.2°
H13C13H13AH13B120.0°120.1°
H20C20C21H2143.8°56.9°
H20C20C21H21A81.1°63.3°
H20AC20C21H21165.0°176.9°
H20AC20C21H21A40.1°56.8°
H23C23C24H24171.1°177.0°
H23C23C24H24A47.1°56.9°
H23AC23C24H2451.2°56.8°
H23AC23C24H24A72.8°63.3°

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon