ZGU
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | O1P | sing | 1.51Å | 1.51Å | |
| P | O2P | doub | 1.48Å | 1.48Å | |
| P | O3G | sing | 1.60Å | 1.60Å | |
| P | OXT | sing | 1.57Å | 1.57Å | |
| O3G | C3G | sing | 1.42Å | 1.42Å | |
| C3G | C2G | sing | 1.52Å | 1.52Å | |
| C2G | O2G | sing | 1.43Å | 1.43Å | |
| C2G | C1G | sing | 1.54Å | 1.54Å | |
| C1G | N9 | sing | 1.47Å | 1.47Å | |
| N9 | C8 | sing | 1.35Å | 1.35Å | Aromatic |
| N9 | C4 | sing | 1.34Å | 1.34Å | Aromatic |
| C8 | N7 | doub | 1.34Å | 1.34Å | Aromatic |
| N7 | C5 | sing | 1.35Å | 1.35Å | Aromatic |
| C4 | C5 | doub | 1.38Å | 1.38Å | Aromatic |
| C4 | N3 | sing | 1.35Å | 1.35Å | |
| C5 | C6 | sing | 1.40Å | 1.40Å | |
| N3 | C2 | doub | 1.33Å | 1.33Å | |
| C2 | N2 | sing | 1.34Å | 1.34Å | |
| C2 | N1 | sing | 1.34Å | 1.34Å | |
| N1 | C6 | sing | 1.36Å | 1.36Å | |
| C6 | O6 | doub | 1.27Å | 1.27Å | |
| O1P | H1P | sing | 0.95Å | 0.95Å | |
| OXT | HOT | sing | 0.95Å | 0.95Å | |
| C3G | H3G1 | sing | 1.10Å | 1.10Å | |
| C3G | H3G2 | sing | 1.10Å | 1.10Å | |
| C2G | H2G | sing | 1.10Å | 1.10Å | |
| O2G | HA | sing | 0.95Å | 0.95Å | |
| C1G | H1G1 | sing | 1.10Å | 1.10Å | |
| C1G | H1G2 | sing | 1.10Å | 1.10Å | |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| N2 | H2N1 | sing | 1.00Å | 1.00Å | |
| N2 | H2N2 | sing | 1.00Å | 1.00Å | |
| N1 | H1 | sing | 1.00Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1P | P | O2P | 120.7° | 120.7° |
| O1P | P | O3G | 107.4° | 107.4° |
| O1P | P | OXT | 106.2° | 106.2° |
| P | O1P | H1P | 109.5° | 109.5° |
| O2P | P | O3G | 108.3° | 108.3° |
| O2P | P | OXT | 112.3° | 112.3° |
| O3G | P | OXT | 99.7° | 99.7° |
| P | O3G | C3G | 120.5° | 120.5° |
| P | OXT | HOT | 109.5° | 109.5° |
| O3G | C3G | C2G | 109.7° | 109.7° |
| O3G | C3G | H3G1 | 109.4° | 109.4° |
| O3G | C3G | H3G2 | 109.3° | 109.3° |
| C3G | C2G | O2G | 108.2° | 108.2° |
| C3G | C2G | C1G | 110.1° | 110.1° |
| C2G | C3G | H3G1 | 109.4° | 109.4° |
| C2G | C3G | H3G2 | 109.3° | 109.3° |
| C3G | C2G | H2G | 109.0° | 109.0° |
| O2G | C2G | C1G | 106.7° | 106.7° |
| O2G | C2G | H2G | 112.2° | 112.2° |
| C2G | O2G | HA | 109.5° | 109.5° |
| C2G | C1G | N9 | 108.9° | 108.9° |
| C1G | C2G | H2G | 110.5° | 110.5° |
| C2G | C1G | H1G1 | 109.7° | 109.7° |
| C2G | C1G | H1G2 | 109.8° | 109.8° |
| C1G | N9 | C8 | 126.2° | 126.2° |
| C1G | N9 | C4 | 126.0° | 126.0° |
| N9 | C1G | H1G1 | 109.7° | 109.7° |
| N9 | C1G | H1G2 | 109.8° | 109.8° |
| C8 | N9 | C4 | 107.8° | 107.8° |
| N9 | C8 | N7 | 110.6° | 110.6° |
| N9 | C8 | H8 | 124.7° | 124.7° |
| N9 | C4 | C5 | 106.7° | 106.7° |
| N9 | C4 | N3 | 129.5° | 129.5° |
| C8 | N7 | C5 | 105.9° | 105.9° |
| N7 | C8 | H8 | 124.7° | 124.7° |
| N7 | C5 | C4 | 108.9° | 108.9° |
| N7 | C5 | C6 | 133.0° | 133.0° |
| C5 | C4 | N3 | 123.8° | 123.8° |
| C4 | C5 | C6 | 118.1° | 118.1° |
| C4 | N3 | C2 | 116.7° | 116.7° |
| C5 | C6 | N1 | 115.8° | 115.8° |
| C5 | C6 | O6 | 124.8° | 124.8° |
| N3 | C2 | N2 | 119.5° | 119.5° |
| N3 | C2 | N1 | 121.7° | 121.7° |
| N2 | C2 | N1 | 118.8° | 118.8° |
| C2 | N2 | H2N1 | 110.5° | 110.5° |
| C2 | N2 | H2N2 | 124.8° | 124.8° |
| C2 | N1 | C6 | 123.9° | 123.9° |
| C2 | N1 | H1 | 118.0° | 118.0° |
| N1 | C6 | O6 | 119.4° | 119.4° |
| C6 | N1 | H1 | 118.0° | 118.0° |
| H3G1 | C3G | H3G2 | 109.7° | 109.7° |
| H1G1 | C1G | H1G2 | 109.0° | 109.0° |
| H2N1 | N2 | H2N2 | 124.7° | 124.7° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1P | P | O2P | O3G | 124.4° | 124.4° |
| O1P | P | O2P | OXT | 126.5° | 126.5° |
| O1P | P | O3G | OXT | 110.6° | 110.6° |
| O1P | P | O3G | C3G | 107.9° | 107.9° |
| O1P | P | OXT | HOT | 149.7° | 149.7° |
| O2P | P | O3G | OXT | 117.5° | 117.5° |
| O2P | P | O3G | C3G | 24.0° | 24.0° |
| O2P | P | O1P | H1P | 146.3° | 146.3° |
| O2P | P | OXT | HOT | 15.8° | 15.8° |
| P | O3G | C3G | C2G | 163.4° | 163.4° |
| O3G | P | O1P | H1P | 88.9° | 88.9° |
| O3G | P | OXT | HOT | 98.8° | 98.8° |
| P | O3G | C3G | H3G1 | 76.6° | 76.6° |
| P | O3G | C3G | H3G2 | 43.5° | 43.5° |
| OXT | P | O3G | C3G | 141.5° | 141.5° |
| OXT | P | O1P | H1P | 17.0° | 17.0° |
| O3G | C3G | C2G | H3G1 | 120.0° | 120.0° |
| O3G | C3G | C2G | H3G2 | 119.9° | 119.9° |
| O3G | C3G | C2G | O2G | 71.1° | 71.1° |
| O3G | C3G | C2G | C1G | 45.3° | 45.3° |
| O3G | C3G | H3G1 | H3G2 | 119.9° | 119.9° |
| O3G | C3G | C2G | H2G | 166.6° | 166.6° |
| C3G | C2G | O2G | C1G | 118.5° | 118.5° |
| C3G | C2G | O2G | H2G | 120.3° | 120.3° |
| C3G | C2G | C1G | H2G | 120.4° | 120.4° |
| C3G | C2G | C1G | N9 | 177.3° | 177.3° |
| C2G | C3G | H3G1 | H3G2 | 119.9° | 119.9° |
| C3G | C2G | O2G | HA | 98.0° | 98.0° |
| C3G | C2G | C1G | H1G1 | 62.7° | 62.7° |
| C3G | C2G | C1G | H1G2 | 57.1° | 57.1° |
| O2G | C2G | C1G | H2G | 122.3° | 122.3° |
| O2G | C2G | C1G | N9 | 65.4° | 65.4° |
| O2G | C2G | C3G | H3G1 | 169.0° | 169.0° |
| O2G | C2G | C3G | H3G2 | 48.8° | 48.8° |
| O2G | C2G | C1G | H1G1 | 54.6° | 54.6° |
| O2G | C2G | C1G | H1G2 | 174.4° | 174.4° |
| C2G | C1G | N9 | H1G1 | 120.0° | 120.0° |
| C2G | C1G | N9 | H1G2 | 120.3° | 120.3° |
| C2G | C1G | N9 | C8 | 86.1° | 86.1° |
| C2G | C1G | N9 | C4 | 92.1° | 92.1° |
| C1G | C2G | C3G | H3G1 | 74.7° | 74.7° |
| C1G | C2G | C3G | H3G2 | 165.2° | 165.2° |
| C1G | C2G | O2G | HA | 20.5° | 20.5° |
| C2G | C1G | H1G1 | H1G2 | 120.2° | 120.2° |
| C1G | N9 | C8 | C4 | 178.5° | 178.5° |
| C1G | N9 | C8 | N7 | 179.7° | 179.7° |
| C1G | N9 | C4 | C5 | 179.2° | 179.2° |
| C1G | N9 | C4 | N3 | 0.1° | 0.1° |
| N9 | C1G | C2G | H2G | 56.9° | 56.9° |
| N9 | C1G | H1G1 | H1G2 | 120.3° | 120.3° |
| C1G | N9 | C8 | H8 | 0.3° | 0.3° |
| N9 | C8 | N7 | H8 | 180.0° | 180.0° |
| N9 | C8 | N7 | C5 | 1.2° | 1.2° |
| C8 | N9 | C4 | C5 | 0.7° | 0.7° |
| C8 | N9 | C4 | N3 | 178.4° | 178.4° |
| C8 | N9 | C1G | H1G1 | 33.9° | 33.9° |
| C8 | N9 | C1G | H1G2 | 153.6° | 153.6° |
| C4 | N9 | C8 | N7 | 1.2° | 1.2° |
| N9 | C4 | C5 | N7 | 0.0° | 0.0° |
| N9 | C4 | C5 | N3 | 179.1° | 179.1° |
| N9 | C4 | C5 | C6 | 178.2° | 178.2° |
| N9 | C4 | N3 | C2 | 179.3° | 179.3° |
| C4 | N9 | C1G | H1G1 | 147.9° | 147.9° |
| C4 | N9 | C1G | H1G2 | 28.2° | 28.2° |
| C4 | N9 | C8 | H8 | 178.8° | 178.8° |
| C8 | N7 | C5 | C4 | 0.7° | 0.7° |
| C8 | N7 | C5 | C6 | 177.2° | 177.2° |
| N7 | C5 | C4 | C6 | 178.3° | 178.3° |
| N7 | C5 | C4 | N3 | 179.2° | 179.2° |
| N7 | C5 | C6 | N1 | 179.3° | 179.3° |
| N7 | C5 | C6 | O6 | 2.6° | 2.6° |
| C5 | N7 | C8 | H8 | 178.8° | 178.8° |
| C5 | C4 | N3 | C2 | 0.4° | 0.4° |
| C4 | C5 | C6 | N1 | 1.5° | 1.5° |
| C4 | C5 | C6 | O6 | 179.7° | 179.7° |
| N3 | C4 | C5 | C6 | 0.9° | 0.9° |
| C4 | N3 | C2 | N2 | 179.3° | 179.3° |
| C4 | N3 | C2 | N1 | 1.0° | 1.0° |
| C5 | C6 | N1 | C2 | 0.9° | 0.9° |
| C5 | C6 | N1 | O6 | 178.3° | 178.3° |
| C5 | C6 | N1 | H1 | 179.1° | 179.1° |
| N3 | C2 | N2 | N1 | 179.6° | 179.6° |
| N3 | C2 | N1 | C6 | 0.4° | 0.4° |
| N3 | C2 | N2 | H2N1 | 180.0° | 180.0° |
| N3 | C2 | N2 | H2N2 | 0.0° | 0.0° |
| N3 | C2 | N1 | H1 | 179.6° | 179.6° |
| N2 | C2 | N1 | C6 | 180.0° | 180.0° |
| C2 | N2 | H2N1 | H2N2 | 180.0° | 180.0° |
| N2 | C2 | N1 | H1 | 0.0° | 0.0° |
| C2 | N1 | C6 | H1 | 180.0° | 180.0° |
| C2 | N1 | C6 | O6 | 179.2° | 179.2° |
| N1 | C2 | N2 | H2N1 | 0.3° | 0.3° |
| N1 | C2 | N2 | H2N2 | 179.6° | 179.6° |
| O6 | C6 | N1 | H1 | 0.8° | 0.8° |
| H3G1 | C3G | C2G | H2G | 46.6° | 46.6° |
| H3G2 | C3G | C2G | H2G | 73.5° | 73.5° |
| H2G | C2G | O2G | HA | 141.7° | 141.7° |
| H2G | C2G | C1G | H1G1 | 176.9° | 176.9° |
| H2G | C2G | C1G | H1G2 | 63.4° | 63.4° |
