ZEB

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N1	C2	sing	1.34Å	1.32Å
N1	C6	sing	1.39Å	1.33Å
N1	C1'	sing	1.46Å	1.63Å
C2	O2	doub	1.22Å	1.22Å
C2	N3	sing	1.35Å	1.34Å
N3	C4	sing	1.47Å	1.44Å
N3	HN3	sing	0.97Å	1.02Å
C4	O4	sing	1.43Å	1.68Å
C4	C5	sing	1.51Å	1.49Å
C4	H4	sing	1.09Å	1.11Å
O4	HO4	sing	0.97Å	0.95Å
C5	C6	doub	1.32Å	1.33Å
C5	H5	sing	1.08Å	1.10Å
C6	H6	sing	1.08Å	1.10Å
C1'	C2'	sing	1.55Å	1.51Å
C1'	O4'	sing	1.44Å	1.42Å
C1'	H1'	sing	1.09Å	1.12Å
C2'	O2'	sing	1.43Å	1.46Å
C2'	C3'	sing	1.55Å	1.48Å
C2'	H2'	sing	1.09Å	1.11Å
O2'	HO2	sing	0.97Å	0.95Å
C3'	O3'	sing	1.43Å	1.40Å
C3'	C4'	sing	1.54Å	1.52Å
C3'	H3'	sing	1.09Å	1.11Å
O3'	HO3	sing	0.97Å	0.95Å
C4'	O4'	sing	1.44Å	1.42Å
C4'	C5'	sing	1.53Å	1.46Å
C4'	H4'	sing	1.09Å	1.11Å
C5'	O5'	sing	1.43Å	1.42Å
C5'	H5'1	sing	1.09Å	1.12Å
C5'	H5'2	sing	1.09Å	1.11Å
O5'	HO5	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C2	N1	C6	124.7°	123.3°
C2	N1	C1'	114.4°	118.3°
N1	C2	O2	119.0°	119.1°
N1	C2	N3	119.8°	121.8°
C6	N1	C1'	118.3°	118.3°
N1	C6	C5	119.9°	121.3°
N1	C6	H6	120.1°	119.4°
N1	C1'	C2'	144.0°	110.8°
N1	C1'	O4'	98.9°	110.6°
N1	C1'	H1'	94.7°	110.5°
O2	C2	N3	121.2°	119.1°
C2	N3	C4	121.1°	118.3°
C2	N3	HN3	115.9°	120.8°
C4	N3	HN3	123.0°	120.9°
N3	C4	O4	115.0°	107.9°
N3	C4	C5	114.3°	117.2°
N3	C4	H4	100.2°	107.9°
O4	C4	C5	102.6°	107.9°
O4	C4	H4	112.3°	107.7°
C4	O4	HO4	115.0°	106.9°
C5	C4	H4	113.1°	108.0°
C4	C5	C6	120.1°	118.1°
C4	C5	H5	125.2°	120.9°
C6	C5	H5	114.7°	121.0°
C5	C6	H6	120.0°	119.4°
C2'	C1'	O4'	116.3°	103.5°
C2'	C1'	H1'	54.0°	110.6°
C1'	C2'	O2'	108.3°	110.9°
C1'	C2'	C3'	98.6°	102.1°
C1'	C2'	H2'	118.7°	110.8°
O4'	C1'	H1'	159.3°	110.7°
C1'	O4'	C4'	100.2°	107.0°
O2'	C2'	C3'	114.3°	110.9°
O2'	C2'	H2'	104.2°	110.8°
C2'	O2'	HO2	108.3°	106.8°
C3'	C2'	H2'	113.2°	111.0°
C2'	C3'	O3'	112.7°	110.5°
C2'	C3'	C4'	105.3°	104.1°
C2'	C3'	H3'	110.4°	110.5°
O3'	C3'	C4'	110.3°	110.9°
O3'	C3'	H3'	105.5°	110.4°
C3'	O3'	HO3	112.7°	106.8°
C4'	C3'	H3'	112.9°	110.4°
C3'	C4'	O4'	106.9°	107.4°
C3'	C4'	C5'	115.7°	109.9°
C3'	C4'	H4'	109.2°	109.8°
O4'	C4'	C5'	114.9°	109.9°
O4'	C4'	H4'	110.0°	109.9°
C5'	C4'	H4'	100.0°	109.9°
C4'	C5'	O5'	103.9°	109.5°
C4'	C5'	H5'1	114.3°	109.4°
C4'	C5'	H5'2	114.3°	109.4°
O5'	C5'	H5'1	114.3°	109.5°
O5'	C5'	H5'2	114.3°	109.5°
C5'	O5'	HO5	103.9°	106.8°
H5'1	C5'	H5'2	96.2°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C2	N1	C6	C1'	160.6°	179.7°
N1	C2	O2	N3	179.1°	179.5°
N1	C2	N3	C4	3.3°	0.6°
N1	C2	N3	HN3	176.7°	179.7°
C2	N1	C6	C5	2.4°	0.3°
C2	N1	C6	H6	177.5°	179.8°
C2	N1	C1'	C2'	86.0°	55.9°
C2	N1	C1'	O4'	105.3°	58.3°
C2	N1	C1'	H1'	59.1°	178.8°
C6	N1	C2	O2	179.1°	179.9°
C6	N1	C2	N3	0.0°	0.6°
N1	C6	C5	C4	1.5°	0.0°
N1	C6	C5	H6	180.0°	179.9°
N1	C6	C5	H5	178.5°	180.0°
C6	N1	C1'	C2'	76.6°	124.4°
C6	N1	C1'	O4'	92.1°	121.4°
C6	N1	C1'	H1'	103.5°	1.5°
C1'	N1	C2	O2	19.6°	0.3°
C1'	N1	C2	N3	161.3°	179.7°
C1'	N1	C6	C5	163.1°	180.0°
C1'	N1	C6	H6	16.9°	0.1°
N1	C1'	C2'	O4'	167.5°	118.6°
N1	C1'	C2'	H1'	33.9°	122.9°
N1	C1'	O4'	H1'	130.5°	122.9°
N1	C1'	C2'	O2'	71.5°	86.1°
N1	C1'	C2'	C3'	169.3°	155.7°
N1	C1'	C2'	H2'	46.9°	37.4°
N1	C1'	O4'	C4'	152.7°	158.7°
O2	C2	N3	C4	175.8°	180.0°
O2	C2	N3	HN3	4.2°	0.3°
C2	N3	C4	HN3	180.0°	179.7°
C2	N3	C4	O4	122.1°	121.7°
C2	N3	C4	C5	3.8°	0.3°
C2	N3	C4	H4	117.4°	122.3°
N3	C4	O4	C5	124.6°	127.5°
N3	C4	O4	H4	113.7°	116.2°
N3	C4	C5	H4	113.7°	122.0°
N3	C4	O4	HO4	180.0°	52.5°
N3	C4	C5	C6	1.5°	0.0°
N3	C4	C5	H5	178.5°	180.0°
HN3	N3	C4	O4	57.9°	58.0°
HN3	N3	C4	C5	176.2°	180.0°
HN3	N3	C4	H4	62.6°	58.0°
O4	C4	C5	H4	121.1°	116.2°
O4	C4	C5	C6	126.6°	121.9°
O4	C4	C5	H5	53.4°	58.1°
C5	C4	O4	HO4	55.4°	179.9°
C4	C5	C6	H5	180.0°	179.9°
C4	C5	C6	H6	178.5°	179.9°
H4	C4	O4	HO4	66.3°	63.7°
H4	C4	C5	C6	112.3°	121.9°
H4	C4	C5	H5	67.7°	58.0°
H5	C5	C6	H6	1.5°	0.0°
C2'	C1'	O4'	H1'	56.9°	118.5°
C1'	C2'	O2'	C3'	108.7°	112.7°
C1'	C2'	O2'	H2'	127.2°	123.6°
C1'	C2'	C3'	H2'	126.3°	118.2°
C1'	C2'	O2'	HO2	179.9°	180.0°
C1'	C2'	C3'	O3'	98.5°	98.0°
C1'	C2'	C3'	C4'	21.7°	21.0°
C1'	C2'	C3'	H3'	143.8°	139.5°
C2'	C1'	O4'	C4'	19.9°	40.0°
O4'	C1'	C2'	O2'	121.0°	155.3°
O4'	C1'	C2'	C3'	1.8°	37.1°
O4'	C1'	C2'	H2'	120.6°	81.2°
C1'	O4'	C4'	C3'	33.0°	26.4°
C1'	O4'	C4'	C5'	96.8°	146.0°
C1'	O4'	C4'	H4'	151.4°	93.0°
H1'	C1'	C2'	O2'	37.5°	36.7°
H1'	C1'	C2'	C3'	156.8°	81.4°
H1'	C1'	C2'	H2'	80.8°	160.3°
H1'	C1'	O4'	C4'	76.8°	78.4°
O2'	C2'	C3'	H2'	119.1°	123.7°
O2'	C2'	C3'	O3'	16.0°	20.1°
O2'	C2'	C3'	C4'	136.3°	139.2°
O2'	C2'	C3'	H3'	101.6°	102.3°
C3'	C2'	O2'	HO2	71.3°	67.3°
C2'	C3'	O3'	C4'	117.3°	114.8°
C2'	C3'	O3'	H3'	120.5°	122.5°
C2'	C3'	C4'	H3'	120.5°	118.5°
C2'	C3'	O3'	HO3	180.0°	180.0°
C2'	C3'	C4'	O4'	36.7°	1.9°
C2'	C3'	C4'	C5'	92.6°	121.4°
C2'	C3'	C4'	H4'	155.7°	117.6°
H2'	C2'	O2'	HO2	52.7°	56.4°
H2'	C2'	C3'	O3'	135.1°	143.8°
H2'	C2'	C3'	C4'	104.6°	97.2°
H2'	C2'	C3'	H3'	17.4°	21.4°
O3'	C3'	C4'	H3'	117.7°	122.7°
O3'	C3'	C4'	O4'	85.1°	120.7°
O3'	C3'	C4'	C5'	145.6°	119.8°
O3'	C3'	C4'	H4'	33.8°	1.2°
C4'	C3'	O3'	HO3	62.7°	65.2°
C3'	C4'	O4'	C5'	129.8°	119.6°
C3'	C4'	O4'	H4'	118.4°	119.4°
C3'	C4'	C5'	H4'	117.0°	121.0°
C3'	C4'	C5'	O5'	37.7°	179.7°
C3'	C4'	C5'	H5'1	163.0°	59.7°
C3'	C4'	C5'	H5'2	87.5°	60.3°
H3'	C3'	O3'	HO3	59.5°	57.5°
H3'	C3'	C4'	O4'	157.2°	116.7°
H3'	C3'	C4'	C5'	27.9°	2.9°
H3'	C3'	C4'	H4'	83.8°	123.9°
O4'	C4'	C5'	H4'	117.6°	121.0°
O4'	C4'	C5'	O5'	87.6°	61.7°
O4'	C4'	C5'	H5'1	37.6°	58.3°
O4'	C4'	C5'	H5'2	147.1°	178.3°
C4'	C5'	O5'	H5'1	125.2°	120.0°
C4'	C5'	O5'	H5'2	125.3°	120.0°
C4'	C5'	H5'1	H5'2	120.3°	119.9°
C4'	C5'	O5'	HO5	179.9°	180.0°
H4'	C4'	C5'	O5'	154.8°	59.3°
H4'	C4'	C5'	H5'1	80.0°	179.3°
H4'	C4'	C5'	H5'2	29.5°	60.7°
O5'	C5'	H5'1	H5'2	120.2°	120.1°
H5'1	C5'	O5'	HO5	54.7°	60.0°
H5'2	C5'	O5'	HO5	54.8°	60.0°

Definition date:	1999-07-08
Last modified:	2011-06-04
Release status:	REL
Processing site:	EBI
Derived from:	1CTU