Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

ZDK

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C11C12doub1.38Å1.38ÅAromatic
C11C10sing1.38Å1.38ÅAromatic
C12C13sing1.38Å1.39ÅAromatic
C10C09doub1.38Å1.39ÅAromatic
C13C08doub1.38Å1.37ÅAromatic
C09C08sing1.38Å1.40ÅAromatic
C08C07sing1.51Å1.56Å
N02C14sing1.35Å1.35ÅAromatic
N02C15doub1.31Å1.38ÅAromatic
C07C04sing1.51Å1.53Å
C07C14sing1.51Å1.59Å
C05C06doub1.38Å1.38ÅAromatic
C05C04sing1.38Å1.39ÅAromatic
C16C15sing1.51Å1.56Å
C16N03sing1.47Å1.33Å
C06C01sing1.38Å1.38ÅAromatic
C04C03doub1.38Å1.37ÅAromatic
C14N01doub1.30Å1.32ÅAromatic
C15O01sing1.34Å1.41ÅAromatic
C01C02doub1.38Å1.40ÅAromatic
C03C02sing1.38Å1.39ÅAromatic
N01O01sing1.21Å1.40ÅAromatic
N03C21sing1.47Å1.32Å
N03C17sing1.47Å1.32Å
C21C20sing1.53Å1.54Å
C17C18sing1.53Å1.55Å
C20C19sing1.53Å1.52Å
C18C19sing1.53Å1.52Å
C19C22sing1.53Å1.53Å
C22O02sing1.43Å1.42Å
O02C23sing1.43Å1.43Å
C01H01sing1.08Å1.08Å
C02H02sing1.08Å1.08Å
C03H05sing1.08Å1.08Å
C05H03sing1.08Å1.08Å
C06H04sing1.08Å1.08Å
C07H11sing1.09Å1.10Å
C09H07sing1.08Å1.08Å
C10H08sing1.08Å1.08Å
C11H09sing1.08Å1.08Å
C12H10sing1.08Å1.08Å
C13H06sing1.08Å1.08Å
C16H13sing1.09Å1.10Å
C16H12sing1.09Å1.10Å
C17H15sing1.09Å1.10Å
C17H14sing1.09Å1.10Å
C18H16sing1.09Å1.10Å
C18H17sing1.09Å1.10Å
C19Hsing1.09Å1.10Å
C20H19sing1.09Å1.10Å
C20H18sing1.09Å1.10Å
C21H21sing1.09Å1.10Å
C21H20sing1.09Å1.10Å
C22H23sing1.09Å1.10Å
C22H22sing1.09Å1.10Å
C23H25sing1.09Å1.10Å
C23H26sing1.09Å1.10Å
C23H24sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C12C11C10121.4°120.0°
C11C12C13118.3°120.0°
C12C11H09119.3°120.0°
C11C12H10120.9°120.0°
C11C10C09120.0°120.0°
C11C10H08120.0°120.0°
C10C11H09119.3°120.0°
C12C13C08121.2°120.0°
C13C12H10120.9°120.0°
C12C13H06119.4°120.0°
C10C09C08118.9°120.0°
C10C09H07120.5°120.0°
C09C10H08120.0°120.0°
C13C08C09120.1°120.0°
C13C08C07120.1°120.0°
C08C13H06119.4°120.0°
C09C08C07119.7°120.0°
C08C09H07120.6°120.0°
C08C07C04114.0°109.4°
C08C07C14105.4°109.5°
C08C07H11109.6°109.5°
C14N02C15107.0°105.6°
N02C14C07124.1°126.3°
N02C14N01111.6°107.4°
N02C15C16125.9°126.5°
N02C15O01107.5°106.9°
C04C07C14108.6°109.4°
C07C04C05122.3°120.0°
C07C04C03117.8°120.1°
C04C07H11110.0°109.5°
C07C14N01124.3°126.3°
C14C07H11109.2°109.5°
C06C05C04120.2°120.0°
C05C06C01121.1°120.0°
C06C05H03119.9°120.0°
C05C06H04119.4°120.0°
C05C04C03119.8°120.0°
C04C05H03119.9°120.0°
C15C16N03113.5°109.5°
C16C15O01126.5°126.6°
C15C16H13108.4°109.5°
C15C16H12108.5°109.5°
C16N03C21111.8°111.0°
C16N03C17113.1°111.0°
N03C16H13108.4°109.5°
N03C16H12108.4°109.5°
C06C01C02118.1°120.0°
C06C01H01121.0°120.0°
C01C06H04119.5°120.0°
C04C03C02119.5°120.0°
C04C03H05120.2°120.0°
C14N01O01107.7°110.2°
C15O01N01106.1°109.8°
C01C02C03121.2°120.0°
C02C01H01120.9°120.0°
C01C02H02119.4°119.9°
C03C02H02119.4°120.1°
C02C03H05120.2°120.0°
C21N03C17112.3°111.2°
N03C21C20111.3°109.5°
N03C21H21109.0°109.5°
N03C21H20109.0°109.4°
N03C17C18112.4°109.5°
N03C17H15108.7°109.5°
N03C17H14108.8°109.5°
C21C20C19112.5°109.3°
C21C20H19108.7°109.5°
C21C20H18108.7°109.6°
C20C21H21109.0°109.5°
C20C21H20109.0°109.5°
C17C18C19110.1°109.3°
C18C17H15108.7°109.4°
C18C17H14108.7°109.4°
C17C18H16109.3°109.5°
C17C18H17109.3°109.5°
C20C19C18107.1°109.2°
C20C19C22110.8°109.5°
C20C19H110.1°109.5°
C19C20H19108.7°109.5°
C19C20H18108.7°109.5°
C18C19C22108.9°109.5°
C19C18H16109.3°109.5°
C19C18H17109.3°109.5°
C18C19H110.0°109.5°
C19C22O02110.4°109.5°
C22C19H109.9°109.5°
C19C22H23109.3°109.5°
C19C22H22109.2°109.4°
C22O02C23114.1°114.0°
O02C22H23109.2°109.5°
O02C22H22109.2°109.5°
O02C23H25109.5°109.5°
O02C23H26109.5°109.4°
O02C23H24109.5°109.5°
H13C16H12109.5°109.4°
H15C17H14109.5°109.5°
H16C18H17109.5°109.5°
H19C20H18109.5°109.4°
H21C21H20109.4°109.4°
H23C22H22109.5°109.4°
H25C23H26109.5°109.4°
H25C23H24109.4°109.5°
H26C23H24109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C12C11C10H09180.0°179.8°
C11C12C13H10180.0°179.8°
C12C11C10C091.0°0.1°
C11C12C13C080.2°0.5°
C12C11C10H08179.0°180.0°
C11C12C13H06179.8°179.9°
C10C11C12C131.0°0.2°
C11C10C09H08180.0°179.9°
C11C10C09C080.2°0.1°
C11C10C09H07179.8°179.9°
C10C11C12H10179.0°180.0°
C12C13C08H06180.0°179.4°
C12C13C08C090.6°0.6°
C12C13C08C07178.1°179.7°
C13C12C11H09179.0°180.0°
C10C09C08C130.6°0.3°
C10C09C08H07180.0°180.0°
C10C09C08C07178.1°180.0°
C09C10C11H09179.0°179.7°
C13C08C09C07177.6°179.8°
C13C08C07C0416.4°67.5°
C13C08C07C14135.4°52.4°
C13C08C07H11107.2°172.5°
C13C08C09H07179.4°179.7°
C08C13C12H10179.8°179.7°
C09C08C07C04161.1°112.2°
C09C08C07C1442.2°127.8°
C09C08C07H1175.2°7.8°
C08C09C10H08179.8°180.0°
C09C08C13H06179.4°180.0°
C08C07C14N0263.2°120.3°
C08C07C04C14117.1°120.0°
C08C07C04H11123.5°120.0°
C08C07C14H11117.6°120.1°
C08C07C04C0566.4°113.0°
C08C07C04C03115.5°67.0°
C08C07C14N01114.8°60.0°
C07C08C09H071.9°0.0°
C07C08C13H061.8°0.3°
N02C14C07C0459.3°119.8°
N02C14C07N01178.0°179.7°
C14N02C15C16177.8°179.9°
C14N02C15O011.0°0.2°
N02C14N01O010.1°0.3°
N02C14C07H11179.2°0.2°
C15N02C14C07177.7°179.9°
N02C15C16O01176.2°179.9°
N02C15C16N03116.1°90.1°
C15N02C14N010.6°0.3°
N02C15O01N011.0°0.0°
N02C15C16H134.5°149.9°
N02C15C16H12123.3°29.9°
C04C07C14H11119.9°120.0°
C07C04C05C06179.6°179.8°
C07C04C05C03178.1°180.0°
C04C07C14N01122.7°60.0°
C07C04C03C02179.6°180.0°
C07C04C03H050.4°0.0°
C07C04C05H030.4°0.3°
C14C07C04C0550.8°127.0°
C14C07C04C03127.4°53.0°
C07C14N01O01178.3°180.0°
C06C05C04H03180.0°179.5°
C05C06C01H04180.0°179.4°
C06C05C04C032.3°0.2°
C05C06C01C022.5°0.6°
C05C06C01H01177.6°179.7°
C04C05C06C012.8°0.6°
C05C04C03C021.4°0.0°
C05C04C03H05178.6°180.0°
C04C05C06H04177.2°180.0°
C05C04C07H11170.1°7.0°
C15C16N03H13120.6°120.0°
C15C16N03H12120.6°120.0°
C16C15O01N01177.8°179.9°
C15C16N03C2160.2°170.0°
C15C16N03C1767.6°65.8°
C15C16H13H12118.2°120.0°
N03C16C15O0160.1°90.0°
C16N03C21C17128.3°124.1°
C16N03C21C20168.5°174.2°
C16N03C17C18167.2°174.1°
N03C16H13H12118.1°120.0°
C16N03C17H1546.8°65.8°
C16N03C17H1472.4°54.2°
C16N03C21H2171.2°54.1°
C16N03C21H2048.2°65.8°
C06C01C02H01180.0°179.7°
C06C01C02C031.6°0.4°
C06C01C02H02178.4°179.7°
C01C06C05H03177.2°179.9°
C04C03C02C011.2°0.0°
C04C03C02H05180.0°180.0°
C04C03C02H02178.8°180.0°
C03C04C05H03177.7°179.7°
C03C04C07H118.0°173.0°
C14N01O01C150.7°0.1°
N01C14C07H112.8°180.0°
O01C15C16H13179.3°30.0°
O01C15C16H1260.5°149.9°
C01C02C03H02180.0°179.9°
C01C02C03H05178.9°179.9°
C02C01C06H04177.6°179.9°
C03C02C01H01178.4°180.0°
N03C21C20H21120.3°120.1°
N03C21C20H20120.3°120.0°
C21N03C17C1865.2°61.8°
N03C21C20C1955.1°59.1°
C21N03C16H1360.4°70.0°
C21N03C16H12179.2°50.0°
C21N03C17H15174.3°58.3°
C21N03C17H1455.2°178.3°
N03C21C20H19175.6°60.8°
N03C21C20H1865.4°179.2°
N03C21H21H20119.1°119.9°
C17N03C21C2063.2°61.7°
N03C17C18H15120.4°120.0°
N03C17C18H14120.5°120.0°
N03C17C18C1957.3°59.2°
C17N03C16H13171.8°54.2°
C17N03C16H1253.0°174.2°
N03C17H15H14118.7°120.0°
N03C17C18H1662.8°60.7°
N03C17C18H17177.4°179.1°
C17N03C21H2157.1°178.2°
C17N03C21H20176.5°58.3°
C21C20C19H19120.4°119.9°
C21C20C19H18120.4°120.1°
C21C20C19C1847.2°57.6°
C21C20C19C22165.9°177.5°
C21C20C19H72.4°62.3°
C21C20H19H18118.6°120.1°
C20C21H21H20119.2°120.0°
C17C18C19C2047.2°57.6°
C17C18C19H16120.1°119.9°
C17C18C19H17120.1°120.0°
C17C18C19C22167.0°177.5°
C18C17H15H14118.7°119.9°
C17C18H16H17119.7°120.1°
C17C18C19H72.5°62.3°
C20C19C18C22119.8°119.9°
C20C19C18H119.7°119.9°
C20C19C22H121.9°120.2°
C20C19C22O0294.2°65.3°
C20C19C18H1672.9°62.3°
C20C19C18H17167.3°177.6°
C19C20H19H18118.7°120.1°
C19C20C21H2165.2°179.2°
C19C20C21H20175.4°60.9°
C20C19C22H2326.0°54.8°
C20C19C22H22145.7°174.7°
C18C19C22H120.6°120.1°
C18C19C22O02148.3°175.0°
C19C18C17H15177.7°60.9°
C19C18C17H1463.2°179.2°
C19C18H16H17119.7°120.1°
C18C19C20H19167.7°62.3°
C18C19C20H1873.2°177.7°
C18C19C22H2391.6°65.0°
C18C19C22H2228.2°55.0°
C19C22O02H23120.1°120.0°
C19C22O02H22120.1°120.0°
C19C22O02C23173.4°180.0°
C22C19C18H1646.9°57.6°
C22C19C18H1772.9°62.5°
C22C19C20H1973.7°57.6°
C22C19C20H1845.4°62.4°
C19C22H23H22119.6°119.9°
O02C22C19H27.7°54.8°
O02C22H23H22119.6°120.0°
C22O02C23H25180.0°59.9°
C22O02C23H2660.0°60.0°
C22O02C23H2460.0°180.0°
C23O02C22H2366.4°59.9°
C23O02C22H2253.3°60.1°
O02C23H25H26120.1°119.9°
O02C23H25H24120.0°120.0°
O02C23H26H24120.0°120.0°
H01C01C02H021.6°0.0°
H01C01C06H042.4°0.3°
H02C02C03H051.1°0.0°
H03C05C06H042.8°0.5°
H07C09C10H080.2°0.0°
H08C10C11H091.0°0.2°
H09C11C12H101.0°0.2°
H10C12C13H060.2°0.3°
H15C17C18H1657.6°179.2°
H15C17C18H1762.2°59.1°
H14C17C18H16176.7°59.3°
H14C17C18H1756.9°60.9°
H16C18C19H167.4°177.7°
H17C18C19H47.6°57.6°
HC19C20H1948.1°177.8°
HC19C20H18167.2°57.8°
HC19C22H23147.9°174.9°
HC19C22H2292.4°65.2°
H19C20C21H2155.3°59.3°
H19C20C21H2064.1°179.2°
H18C20C21H21174.4°60.8°
H18C20C21H2054.9°59.2°
H25C23H26H24119.9°120.1°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon