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SummaryGeometryRelated PDB entries

ZC9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
F01C02sing1.35Å1.37Å
C02C07doub1.39Å1.39ÅAromatic
C02C03sing1.39Å1.38ÅAromatic
C07N06sing1.32Å1.32ÅAromatic
C03C04doub1.38Å1.38ÅAromatic
N06C05doub1.33Å1.32ÅAromatic
C04C05sing1.40Å1.38ÅAromatic
C05C08sing1.48Å1.38Å
C08N12sing1.36Å1.32ÅAromatic
C08C09doub1.37Å1.39ÅAromatic
N12N11sing1.40Å1.36ÅAromatic
C09C10sing1.39Å1.38ÅAromatic
N11C10doub1.31Å1.32ÅAromatic
C10H1sing1.08Å1.08Å
N12H2sing0.97Å1.00Å
C03H3sing1.08Å1.08Å
C04H4sing1.08Å1.08Å
C07H5sing1.08Å1.08Å
C09H6sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
F01C02C07121.8°120.3°
F01C02C03119.3°120.4°
C07C02C03118.8°119.4°
C02C07N06121.7°120.8°
C02C07H5119.2°119.6°
C02C03C04118.4°118.5°
C02C03H3120.8°120.8°
C07N06C05120.1°121.7°
N06C07H5119.2°119.6°
C03C04C05119.7°119.1°
C04C03H3120.8°120.7°
C03C04H4120.2°120.5°
N06C05C04121.3°120.5°
N06C05C08120.5°119.7°
C04C05C08118.2°119.7°
C05C04H4120.2°120.4°
C05C08N12126.9°126.4°
C05C08C09125.2°126.3°
N12C08C09107.9°107.3°
C08N12N11108.5°107.7°
C08N12H2125.8°126.1°
C08C09C10106.6°107.8°
C08C09H6126.7°126.1°
N12N11C10109.3°108.5°
N11N12H2125.8°126.2°
C09C10N11107.7°108.6°
C09C10H1126.2°125.7°
C10C09H6126.7°126.1°
N11C10H1126.2°125.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
F01C02C07C03178.5°179.8°
F01C02C07N06179.5°179.7°
F01C02C03C04179.4°180.0°
F01C02C03H30.6°0.0°
F01C02C07H50.5°0.1°
C02C07N06H5180.0°179.8°
C07C02C03C042.1°0.2°
C02C07N06C050.0°0.6°
C07C02C03H3177.9°179.8°
C03C02C07N061.1°0.5°
C02C03C04H3180.0°180.0°
C02C03C04C052.1°0.0°
C02C03C04H4178.0°180.0°
C03C02C07H5178.9°179.7°
C07N06C05C040.1°0.3°
C07N06C05C08178.5°179.7°
C03C04C05N061.0°0.0°
C03C04C05H4180.0°179.9°
C03C04C05C08179.6°180.0°
N06C05C04C08178.6°180.0°
N06C05C08N129.5°179.9°
N06C05C08C09168.5°0.1°
N06C05C04H4179.0°180.0°
C05N06C07H5180.0°179.7°
C04C05C08N12171.9°0.1°
C04C05C08C0910.1°180.0°
C05C04C03H3178.0°180.0°
C05C08N12C09178.3°179.9°
C05C08N12N11179.5°180.0°
C05C08C09C10178.8°179.8°
C05C08N12H20.5°0.2°
C08C05C04H40.5°0.1°
C05C08C09H61.2°0.2°
C08N12N11H2180.0°179.9°
N12C08C09C100.4°0.1°
C08N12N11C101.4°0.2°
N12C08C09H6179.6°179.9°
C09C08N12N111.1°0.0°
C08C09C10H6180.0°180.0°
C08C09C10N110.4°0.2°
C08C09C10H1179.6°180.0°
C09C08N12H2178.9°179.9°
N12N11C10C091.1°0.2°
N12N11C10H1178.9°180.0°
C09C10N11H1180.0°179.8°
C10N11N12H2178.6°180.0°
N11C10C09H6179.5°179.7°
H1C10C09H60.5°0.0°
H3C03C04H42.0°0.0°

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PDB entries from 2024-11-06

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