Z6J

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O5	C5	sing	1.43Å	1.43Å
C5	C4	sing	1.53Å	1.52Å
C4	O4	sing	1.44Å	1.43Å
C4	C3	sing	1.55Å	1.52Å
O4	C1	sing	1.43Å	1.43Å
C3	O3	sing	1.43Å	1.43Å
C3	C2	sing	1.55Å	1.52Å
C2	O2	sing	1.43Å	1.43Å
C2	C1	sing	1.54Å	1.52Å
C1	O1	sing	1.43Å	1.34Å
C5	H51	sing	1.09Å	1.10Å
C5	H52	sing	1.09Å	1.10Å
C4	H4	sing	1.09Å	1.10Å
C3	H3	sing	1.09Å	1.10Å
C1	H1	sing	1.09Å	1.10Å
O3	HO3	sing	0.97Å	0.95Å
C2	H2	sing	1.09Å	1.10Å
O2	HO2	sing	0.97Å	0.95Å
O1	HO1	sing	0.97Å	0.95Å
O5	HO5	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O5	C5	C4	111.3°	109.5°
O5	C5	H51	109.0°	109.5°
O5	C5	H52	109.0°	109.5°
C5	O5	HO5	109.5°	114.0°
C5	C4	O4	109.4°	110.3°
C5	C4	C3	112.6°	110.4°
C4	C5	H51	109.0°	109.5°
C4	C5	H52	109.0°	109.5°
C5	C4	H4	108.6°	110.3°
O4	C4	C3	107.7°	105.1°
C4	O4	C1	110.6°	109.9°
O4	C4	H4	109.9°	110.3°
C4	C3	O3	109.2°	111.1°
C4	C3	C2	104.8°	101.0°
C3	C4	H4	108.6°	110.4°
C4	C3	H3	109.8°	111.1°
O4	C1	C2	105.9°	107.7°
O4	C1	O1	101.3°	109.8°
O4	C1	H1	106.7°	109.8°
O3	C3	C2	111.7°	111.2°
O3	C3	H3	111.2°	110.9°
C3	O3	HO3	109.5°	114.0°
C3	C2	O2	112.8°	110.8°
C3	C2	C1	105.3°	102.2°
C2	C3	H3	109.9°	111.2°
C3	C2	H2	109.2°	110.9°
O2	C2	C1	109.7°	110.8°
O2	C2	H2	110.5°	110.8°
C2	O2	HO2	109.5°	114.0°
C2	C1	O1	127.8°	109.9°
C2	C1	H1	105.7°	109.8°
C1	C2	H2	109.2°	111.0°
O1	C1	H1	107.9°	109.9°
C1	O1	HO1	109.5°	114.0°
H51	C5	H52	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O5	C5	C4	H51	120.3°	120.0°
O5	C5	C4	H52	120.3°	120.0°
O5	C5	C4	O4	58.3°	66.5°
O5	C5	C4	C3	61.5°	177.8°
O5	C5	H51	H52	119.1°	120.0°
O5	C5	C4	H4	178.2°	55.6°
C5	C4	O4	C3	122.7°	118.9°
C5	C4	O4	H4	119.2°	122.1°
C5	C4	C3	H4	120.3°	122.2°
C5	C4	O4	C1	133.6°	143.4°
C5	C4	C3	O3	124.2°	86.7°
C5	C4	C3	C2	116.0°	155.3°
C4	C5	H51	H52	119.1°	120.0°
C5	C4	C3	H3	2.0°	37.3°
C4	C5	O5	HO5	180.0°	180.0°
O4	C4	C3	H4	119.0°	118.9°
O4	C4	C3	O3	115.1°	154.4°
O4	C4	C3	C2	4.8°	36.4°
C4	O4	C1	C2	22.0°	1.8°
C4	O4	C1	O1	113.0°	117.8°
O4	C4	C5	H51	62.0°	173.5°
O4	C4	C5	H52	178.6°	53.5°
O4	C4	C3	H3	122.7°	81.6°
C4	O4	C1	H1	134.3°	121.3°
C3	C4	O4	C1	10.9°	24.4°
C4	C3	O3	C2	115.4°	111.6°
C4	C3	O3	H3	121.4°	124.1°
C4	C3	C2	H3	117.9°	117.9°
C4	C3	C2	O2	137.0°	84.1°
C4	C3	C2	C1	17.4°	34.1°
C3	C4	C5	H51	178.2°	57.8°
C3	C4	C5	H52	58.8°	62.1°
C4	C3	O3	HO3	180.0°	180.0°
C4	C3	C2	H2	99.8°	152.5°
O4	C1	C2	C3	24.1°	21.3°
O4	C1	C2	O2	145.7°	96.9°
O4	C1	C2	O1	118.7°	119.6°
O4	C1	C2	H1	113.0°	119.5°
O4	C1	O1	H1	111.9°	120.9°
C1	O4	C4	H4	107.2°	94.5°
O4	C1	C2	H2	93.0°	139.6°
O4	C1	O1	HO1	180.0°	61.4°
O3	C3	C2	H3	123.9°	124.1°
O3	C3	C2	O2	18.8°	33.9°
O3	C3	C2	C1	100.8°	152.0°
O3	C3	C4	H4	3.9°	35.5°
O3	C3	C2	H2	142.1°	89.6°
C3	C2	O2	C1	117.0°	112.8°
C3	C2	O2	H2	122.5°	123.5°
C3	C2	C1	H2	117.1°	118.3°
C3	C2	C1	O1	94.5°	140.9°
C2	C3	C4	H4	123.7°	82.5°
C3	C2	C1	H1	137.1°	98.2°
C2	C3	O3	HO3	64.6°	68.4°
C3	C2	O2	HO2	180.0°	180.0°
O2	C2	C1	H2	121.3°	123.5°
O2	C2	C1	O1	27.1°	22.7°
O2	C2	C3	H3	105.1°	158.0°
O2	C2	C1	H1	101.3°	143.6°
C2	C1	O1	H1	127.5°	120.9°
C1	C2	C3	H3	135.3°	83.8°
C1	C2	O2	HO2	63.0°	67.2°
C2	C1	O1	HO1	59.4°	179.6°
O1	C1	C2	H2	148.3°	100.8°
H51	C5	C4	H4	57.9°	64.4°
H51	C5	O5	HO5	59.7°	60.0°
H52	C5	C4	H4	61.5°	175.6°
H52	C5	O5	HO5	59.7°	60.0°
H4	C4	C3	H3	118.3°	159.5°
H3	C3	O3	HO3	58.6°	55.9°
H3	C3	C2	H2	18.1°	34.6°
H1	C1	C2	H2	20.0°	20.1°
H1	C1	O1	HO1	68.1°	59.5°
H2	C2	O2	HO2	57.5°	56.5°

Release date:	2014-05-28
Definition date:	2012-12-19
Last modified:	2020-07-17
Release status:	REL
Processing site:	RCSB
Derived from:	2VGD