Z6G
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O1 | C1 | sing | 1.43Å | 1.42Å | |
C1 | C2 | sing | 1.53Å | 1.49Å | |
C1 | O3 | sing | 1.43Å | 1.44Å | |
C1 | H11 | sing | 1.09Å | 1.10Å | |
C2 | C3 | sing | 1.53Å | 1.54Å | |
C2 | H21 | sing | 1.09Å | 1.10Å | |
C2 | H22 | sing | 1.09Å | 1.10Å | |
C3 | C4 | sing | 1.53Å | 1.50Å | |
C3 | N1 | sing | 1.47Å | 1.49Å | |
C3 | H31 | sing | 1.09Å | 1.10Å | |
C4 | C5 | sing | 1.53Å | 1.50Å | |
C4 | O2 | sing | 1.43Å | 1.41Å | |
C4 | H41 | sing | 1.09Å | 1.10Å | |
C5 | C6 | sing | 1.53Å | 1.55Å | |
C5 | O3 | sing | 1.43Å | 1.44Å | |
C5 | H51 | sing | 1.09Å | 1.10Å | |
C6 | H61 | sing | 1.09Å | 1.10Å | |
C6 | H62 | sing | 1.09Å | 1.10Å | |
C6 | H63 | sing | 1.09Å | 1.10Å | |
O2 | H2O | sing | 0.97Å | 0.95Å | |
N1 | H11N | sing | 1.01Å | 1.00Å | |
N1 | H12N | sing | 1.01Å | 1.00Å | |
N1 | HN'3 | sing | 1.01Å | 1.00Å | |
H1O | O1 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O1 | C1 | C2 | 105.2° | 109.5° |
O1 | C1 | O3 | 110.9° | 109.5° |
O1 | C1 | H11 | 110.2° | 109.4° |
C1 | O1 | H1O | 109.5° | 114.0° |
C2 | C1 | O3 | 111.5° | 109.4° |
C2 | C1 | H11 | 109.2° | 109.5° |
C1 | C2 | C3 | 111.2° | 109.2° |
C1 | C2 | H21 | 109.0° | 109.5° |
C1 | C2 | H22 | 109.0° | 109.5° |
O3 | C1 | H11 | 109.8° | 109.5° |
C1 | O3 | C5 | 113.5° | 114.1° |
C3 | C2 | H21 | 109.0° | 109.5° |
C3 | C2 | H22 | 109.0° | 109.5° |
C2 | C3 | C4 | 110.2° | 109.0° |
C2 | C3 | N1 | 106.6° | 109.6° |
C2 | C3 | H31 | 109.8° | 109.5° |
H21 | C2 | H22 | 109.5° | 109.5° |
C4 | C3 | N1 | 109.2° | 109.6° |
C4 | C3 | H31 | 110.4° | 109.5° |
C3 | C4 | C5 | 110.7° | 109.2° |
C3 | C4 | O2 | 111.6° | 109.5° |
C3 | C4 | H41 | 105.9° | 109.5° |
N1 | C3 | H31 | 110.6° | 109.7° |
C3 | N1 | H11N | 109.5° | 109.5° |
C3 | N1 | H12N | 109.5° | 109.5° |
C3 | N1 | HN'3 | 109.5° | 109.5° |
C5 | C4 | O2 | 115.0° | 109.5° |
C5 | C4 | H41 | 105.9° | 109.5° |
C4 | C5 | C6 | 114.4° | 109.5° |
C4 | C5 | O3 | 110.4° | 109.4° |
C4 | C5 | H51 | 108.3° | 109.5° |
O2 | C4 | H41 | 107.1° | 109.5° |
C4 | O2 | H2O | 109.5° | 114.0° |
C6 | C5 | O3 | 106.8° | 109.5° |
C6 | C5 | H51 | 107.8° | 109.5° |
C5 | C6 | H61 | 109.5° | 109.5° |
C5 | C6 | H62 | 109.5° | 109.5° |
C5 | C6 | H63 | 109.5° | 109.5° |
O3 | C5 | H51 | 109.1° | 109.5° |
H61 | C6 | H62 | 109.4° | 109.5° |
H61 | C6 | H63 | 109.5° | 109.4° |
H62 | C6 | H63 | 109.5° | 109.5° |
H11N | N1 | H12N | 109.4° | 109.5° |
H11N | N1 | HN'3 | 109.4° | 109.5° |
H12N | N1 | HN'3 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O1 | C1 | C2 | O3 | 120.2° | 120.0° |
O1 | C1 | C2 | H11 | 118.3° | 120.0° |
O1 | C1 | O3 | H11 | 122.0° | 120.0° |
O1 | C1 | C2 | C3 | 67.5° | 62.4° |
O1 | C1 | C2 | H21 | 172.3° | 177.7° |
O1 | C1 | C2 | H22 | 52.8° | 57.5° |
O1 | C1 | O3 | C5 | 59.5° | 58.8° |
C2 | C1 | O3 | H11 | 121.1° | 120.0° |
C1 | C2 | C3 | H21 | 120.3° | 119.9° |
C1 | C2 | C3 | H22 | 120.3° | 119.9° |
C1 | C2 | H21 | H22 | 119.2° | 120.2° |
C1 | C2 | C3 | C4 | 51.9° | 57.0° |
C1 | C2 | C3 | N1 | 170.3° | 176.8° |
C1 | C2 | C3 | H31 | 69.8° | 62.8° |
C2 | C1 | O3 | C5 | 57.3° | 61.2° |
C2 | C1 | O1 | H1O | 180.0° | 180.0° |
O3 | C1 | C2 | C3 | 52.8° | 57.6° |
O3 | C1 | C2 | H21 | 67.5° | 62.3° |
O3 | C1 | C2 | H22 | 173.0° | 177.5° |
C1 | O3 | C5 | C4 | 58.9° | 61.2° |
C1 | O3 | C5 | C6 | 176.2° | 178.9° |
C1 | O3 | C5 | H51 | 60.0° | 58.8° |
O3 | C1 | O1 | H1O | 59.4° | 60.1° |
H11 | C1 | C2 | C3 | 174.3° | 177.6° |
H11 | C1 | C2 | H21 | 54.0° | 57.7° |
H11 | C1 | C2 | H22 | 65.5° | 62.5° |
H11 | C1 | O3 | C5 | 178.4° | 178.8° |
H11 | C1 | O1 | H1O | 62.4° | 59.9° |
C3 | C2 | H21 | H22 | 119.2° | 120.1° |
C2 | C3 | C4 | N1 | 116.8° | 119.9° |
C2 | C3 | C4 | H31 | 121.5° | 119.8° |
C2 | C3 | N1 | H31 | 119.3° | 120.2° |
C2 | C3 | C4 | C5 | 53.8° | 57.0° |
C2 | C3 | C4 | O2 | 176.8° | 176.9° |
C2 | C3 | C4 | H41 | 60.7° | 63.0° |
C2 | C3 | N1 | H11N | 180.0° | 60.0° |
C2 | C3 | N1 | H12N | 60.0° | 180.0° |
C2 | C3 | N1 | HN'3 | 60.0° | 60.0° |
H21 | C2 | C3 | C4 | 68.3° | 63.0° |
H21 | C2 | C3 | N1 | 50.0° | 56.9° |
H21 | C2 | C3 | H31 | 169.9° | 177.2° |
H22 | C2 | C3 | C4 | 172.2° | 176.9° |
H22 | C2 | C3 | N1 | 69.4° | 63.2° |
H22 | C2 | C3 | H31 | 50.4° | 57.1° |
C4 | C3 | N1 | H31 | 121.6° | 120.2° |
C3 | C4 | C5 | O2 | 127.6° | 119.9° |
C3 | C4 | C5 | H41 | 114.4° | 119.9° |
C3 | C4 | O2 | H41 | 115.5° | 120.1° |
C3 | C4 | C5 | C6 | 177.4° | 177.6° |
C3 | C4 | C5 | O3 | 57.0° | 57.6° |
C3 | C4 | C5 | H51 | 62.4° | 62.4° |
C3 | C4 | O2 | H2O | 180.0° | 180.0° |
C4 | C3 | N1 | H11N | 60.9° | 179.5° |
C4 | C3 | N1 | H12N | 59.1° | 60.5° |
C4 | C3 | N1 | HN'3 | 179.1° | 59.5° |
N1 | C3 | C4 | C5 | 170.6° | 176.9° |
N1 | C3 | C4 | O2 | 60.0° | 63.2° |
N1 | C3 | C4 | H41 | 56.1° | 56.9° |
C3 | N1 | H11N | H12N | 120.0° | 120.0° |
C3 | N1 | H11N | HN'3 | 120.0° | 120.0° |
C3 | N1 | H12N | HN'3 | 120.0° | 120.0° |
H31 | C3 | C4 | C5 | 67.7° | 62.8° |
H31 | C3 | C4 | O2 | 61.7° | 57.1° |
H31 | C3 | C4 | H41 | 177.9° | 177.2° |
H31 | C3 | N1 | H11N | 60.7° | 60.2° |
H31 | C3 | N1 | H12N | 179.3° | 59.8° |
H31 | C3 | N1 | HN'3 | 59.3° | 179.8° |
C5 | C4 | O2 | H41 | 117.4° | 120.2° |
C4 | C5 | C6 | O3 | 122.5° | 119.9° |
C4 | C5 | C6 | H51 | 120.5° | 120.0° |
C4 | C5 | O3 | H51 | 118.9° | 120.0° |
C4 | C5 | C6 | H61 | 180.0° | 60.0° |
C4 | C5 | C6 | H62 | 60.0° | 180.0° |
C4 | C5 | C6 | H63 | 60.0° | 60.0° |
C5 | C4 | O2 | H2O | 52.9° | 60.3° |
O2 | C4 | C5 | C6 | 55.0° | 62.5° |
O2 | C4 | C5 | O3 | 175.5° | 177.5° |
O2 | C4 | C5 | H51 | 65.2° | 57.5° |
H41 | C4 | C5 | C6 | 63.0° | 57.7° |
H41 | C4 | C5 | O3 | 57.5° | 62.3° |
H41 | C4 | C5 | H51 | 176.8° | 177.7° |
H41 | C4 | O2 | H2O | 64.5° | 59.9° |
C6 | C5 | O3 | H51 | 116.2° | 120.0° |
C5 | C6 | H61 | H62 | 120.0° | 120.0° |
C5 | C6 | H61 | H63 | 120.0° | 120.0° |
C5 | C6 | H62 | H63 | 120.0° | 120.0° |
O3 | C5 | C6 | H61 | 57.5° | 179.9° |
O3 | C5 | C6 | H62 | 62.5° | 60.1° |
O3 | C5 | C6 | H63 | 177.5° | 60.0° |
H51 | C5 | C6 | H61 | 59.6° | 60.0° |
H51 | C5 | C6 | H62 | 179.5° | 60.0° |
H51 | C5 | C6 | H63 | 60.5° | 180.0° |
H61 | C6 | H62 | H63 | 120.0° | 120.0° |
H11N | N1 | H12N | HN'3 | 120.0° | 120.0° |