Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

Z5P

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C9C8sing1.38Å1.37ÅAromatic
C9C10doub1.38Å1.36ÅAromatic
C8C7doub1.38Å1.36ÅAromatic
C10C11sing1.38Å1.36ÅAromatic
C7C6sing1.39Å1.37ÅAromatic
C2C1sing1.40Å1.42ÅAromatic
C2C3doub1.35Å1.39ÅAromatic
C1N5doub1.31Å1.35ÅAromatic
C3N4sing1.35Å1.37ÅAromatic
C11C6doub1.39Å1.40ÅAromatic
C11C12sing1.51Å1.49Å
C6N4sing1.40Å1.44Å
C12N13sing1.47Å1.48Å
N5N4sing1.40Å1.37ÅAromatic
C9H9sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
C10H10sing1.08Å1.08Å
C7H7sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
C1H1sing1.08Å1.08Å
C3H3sing1.08Å1.08Å
C12H121sing1.09Å1.10Å
C12H122sing1.09Å1.10Å
N13H131sing1.01Å1.00Å
N13H132sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C8C9C10118.2°120.1°
C9C8C7121.0°120.1°
C8C9H9120.9°119.9°
C9C8H8119.5°120.0°
C9C10C11121.7°120.1°
C10C9H9120.9°119.9°
C9C10H10119.1°119.9°
C8C7C6121.4°119.9°
C7C8H8119.5°119.9°
C8C7H7119.3°120.0°
C10C11C6120.3°119.9°
C10C11C12112.1°120.0°
C11C10H10119.2°120.0°
C7C6C11117.3°119.8°
C7C6N4113.0°120.1°
C6C7H7119.3°120.0°
C1C2C3105.6°107.9°
C2C1N5109.3°108.3°
C1C2H2127.2°126.1°
C2C1H1125.4°125.9°
C2C3N4107.8°107.7°
C3C2H2127.2°126.0°
C2C3H3126.1°126.2°
C1N5N4107.6°108.2°
N5C1H1125.4°125.8°
C3N4C6131.5°126.0°
C3N4N5109.7°107.9°
N4C3H3126.1°126.1°
C6C11C12127.5°120.0°
C11C6N4129.7°120.1°
C11C12N13107.1°109.5°
C11C12H121110.0°109.5°
C11C12H122110.0°109.5°
C6N4N5118.2°126.1°
N13C12H121110.1°109.4°
N13C12H122110.1°109.5°
C12N13H131109.5°111.0°
C12N13H132109.5°111.0°
H121C12H122109.5°109.5°
H131N13H132109.4°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C8C9C10H9180.0°180.0°
C9C8C7H8180.0°180.0°
C8C9C10C110.2°0.0°
C9C8C7C60.0°0.0°
C8C9C10H10179.8°179.7°
C9C8C7H7180.0°179.9°
C10C9C8C70.6°0.0°
C9C10C11H10180.0°179.7°
C9C10C11C60.7°0.0°
C9C10C11C12177.6°179.8°
C10C9C8H8179.4°180.0°
C8C7C6H7180.0°179.9°
C8C7C6C110.8°0.0°
C8C7C6N4177.1°180.0°
C7C8C9H9179.5°180.0°
C10C11C6C71.2°0.0°
C10C11C6C12176.4°179.8°
C10C11C6N4176.3°180.0°
C10C11C12N13157.3°100.0°
C11C10C9H9179.8°180.0°
C10C11C12H12137.6°140.0°
C10C11C12H12283.1°20.0°
C7C6N4C3178.2°0.0°
C7C6C11N4177.5°180.0°
C7C6C11C12177.6°179.7°
C7C6N4N58.7°179.7°
C6C7C8H8180.0°180.0°
C1C2C3H2180.0°179.7°
C2C1N5H1180.0°179.8°
C1C2C3N41.4°0.0°
C2C1N5N40.2°0.4°
C1C2C3H3178.6°180.0°
C3C2C1N51.1°0.3°
C2C3N4H3180.0°180.0°
C2C3N4C6168.9°180.0°
C2C3N4N51.4°0.2°
C3C2C1H1178.9°180.0°
C1N5N4C30.7°0.4°
C1N5N4C6171.0°179.9°
N5C1C2H2178.9°180.0°
C3N4C6C114.2°180.0°
C3N4C6N5169.6°179.7°
N4C3C2H2178.6°179.7°
C6C11C12N1319.4°79.7°
C11C6N4N5173.8°0.3°
C6C11C10H10179.3°179.7°
C11C6C7H7179.2°180.0°
C6C11C12H121139.1°40.2°
C6C11C12H122100.2°160.3°
C12C11C6N40.1°0.3°
C11C12N13H121119.6°120.0°
C11C12N13H122119.6°120.0°
C12C11C10H102.4°0.0°
C11C12H121H122121.0°120.0°
C11C12N13H131180.0°180.0°
C11C12N13H13260.0°56.0°
N4C6C7H73.0°0.0°
C6N4C3H311.1°0.0°
N13C12H121H122121.1°120.0°
C12N13H131H132120.0°124.0°
N4N5C1H1179.8°179.8°
N5N4C3H3178.7°179.8°
H9C9C8H80.5°0.0°
H9C9C10H100.2°0.3°
H8C8C7H70.0°0.0°
H2C2C1H11.1°0.2°
H2C2C3H31.4°0.3°
H121C12N13H13160.4°60.0°
H121C12N13H132179.6°64.0°
H122C12N13H13160.4°60.0°
H122C12N13H13259.6°176.0°

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon