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SummaryGeometryRelated PDB entries

Z3J

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C01N02sing1.46Å1.45Å
N02C03sing1.35Å1.47Å
C03O04doub1.22Å1.21Å
C03C05sing1.47Å1.55Å
O28C27sing1.36Å1.42Å
C27C29doub1.39Å1.40ÅAromatic
C27C26sing1.39Å1.40ÅAromatic
C29C30sing1.38Å1.43ÅAromatic
C26C25doub1.38Å1.43ÅAromatic
C14C13sing1.51Å1.54Å
C14N15sing1.47Å1.47Å
C05C06doub1.39Å1.42ÅAromatic
C05C23sing1.48Å1.55ÅAromatic
C30C24doub1.40Å1.43ÅAromatic
C25C24sing1.40Å1.43ÅAromatic
C24C06sing1.47Å1.58Å
C22N15sing1.49Å1.50Å
C22C18sing1.53Å1.49Å
C06O07sing1.34Å1.39ÅAromatic
C23C13doub1.39Å1.45ÅAromatic
C23C08sing1.40Å1.41ÅAromatic
C13C11sing1.38Å1.44ÅAromatic
N15C16sing1.48Å1.47Å
O07C08sing1.35Å1.37ÅAromatic
C08C09doub1.39Å1.44ÅAromatic
C11O12sing1.36Å1.39Å
C11C10doub1.39Å1.42ÅAromatic
C19C18sing1.53Å1.52Å
C19O20sing1.44Å1.45Å
C18C21sing1.53Å1.52Å
C18C17sing1.53Å1.48Å
C21O20sing1.45Å1.47Å
C09C10sing1.38Å1.41ÅAromatic
C16C17sing1.54Å1.54Å
C10H1sing1.08Å1.08Å
C01H2sing1.09Å1.10Å
C01H3sing1.09Å1.10Å
C01H4sing1.09Å1.10Å
C09H5sing1.08Å1.08Å
C14H6sing1.09Å1.10Å
C14H7sing1.09Å1.10Å
C16H8sing1.09Å1.10Å
C16H9sing1.09Å1.10Å
C17H10sing1.09Å1.10Å
C17H11sing1.09Å1.10Å
C19H12sing1.09Å1.10Å
C19H13sing1.09Å1.10Å
C21H14sing1.09Å1.10Å
C21H15sing1.09Å1.10Å
C22H16sing1.09Å1.10Å
C22H17sing1.09Å1.10Å
C25H18sing1.08Å1.08Å
C26H19sing1.08Å1.08Å
C29H20sing1.08Å1.08Å
C30H21sing1.08Å1.08Å
N02H22sing0.97Å1.00Å
O12H24sing0.97Å0.95Å
O28H25sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C01N02C03127.2°120.0°
N02C01H2109.5°109.5°
N02C01H3109.5°109.5°
N02C01H4109.5°109.5°
C01N02H22116.4°120.1°
N02C03O04110.9°120.0°
N02C03C05128.1°120.0°
C03N02H22116.4°119.9°
O04C03C05121.0°120.0°
C03C05C06126.4°127.3°
C03C05C23128.8°127.3°
O28C27C29120.7°119.9°
O28C27C26119.4°119.9°
C27O28H25109.5°114.0°
C29C27C26119.9°120.2°
C27C29C30119.3°120.1°
C27C29H20120.4°119.9°
C27C26C25119.6°120.1°
C27C26H19120.2°119.9°
C29C30C24123.8°119.9°
C30C29H20120.4°120.0°
C29C30H21118.1°120.0°
C26C25C24124.1°119.9°
C26C25H18118.0°120.0°
C25C26H19120.2°120.0°
C13C14N15103.2°109.4°
C14C13C23118.9°120.2°
C14C13C11118.6°120.2°
C13C14H6111.0°109.5°
C13C14H7111.0°109.5°
C14N15C22112.6°111.0°
C14N15C16105.9°111.0°
N15C14H6111.0°109.4°
N15C14H7111.0°109.5°
C06C05C23104.7°105.5°
C05C06C24132.8°125.3°
C05C06O07108.0°109.3°
C05C23C13139.0°133.9°
C05C23C08105.9°105.7°
C30C24C25113.3°119.8°
C30C24C06124.1°120.1°
C24C30H21118.1°120.1°
C25C24C06122.4°120.1°
C24C25H18117.9°120.1°
C24C06O07119.1°125.4°
N15C22C18107.1°103.1°
C22N15C16104.8°106.0°
N15C22H16110.1°110.7°
N15C22H17110.1°110.7°
C22C18C19126.9°116.2°
C22C18C21103.5°116.1°
C22C18C17108.0°104.6°
C18C22H16110.1°110.7°
C18C22H17110.1°110.7°
C06O07C08113.4°111.4°
C13C23C08115.0°120.4°
C23C13C11122.5°119.6°
C23C08O07107.9°108.1°
C23C08C09123.7°119.3°
C13C11O12119.4°120.0°
C13C11C10120.0°120.1°
N15C16C17105.6°107.1°
N15C16H8110.4°109.9°
N15C16H9110.4°110.1°
O07C08C09128.4°132.6°
C08C09C10119.2°120.1°
C08C09H5120.4°120.0°
O12C11C10120.6°120.0°
C11O12H24109.5°114.0°
C11C10C09119.6°120.6°
C11C10H1120.2°119.7°
C18C19O2091.0°85.0°
C19C18C2186.8°87.3°
C19C18C17114.1°116.4°
C18C19H12113.9°113.9°
C18C19H13113.9°113.9°
C19O20C2190.9°93.6°
O20C19H12113.9°113.9°
O20C19H13113.9°114.0°
C21C18C17115.0°116.3°
C18C21O2090.4°85.0°
C18C21H14114.0°114.0°
C18C21H15114.0°113.9°
C18C17C16104.7°104.7°
C18C17H10110.6°110.4°
C18C17H11110.7°110.5°
O20C21H14114.0°113.9°
O20C21H15114.0°113.9°
C09C10H1120.2°119.7°
C10C09H5120.4°119.9°
C17C16H8110.4°109.9°
C17C16H9110.4°109.9°
C16C17H10110.6°110.4°
C16C17H11110.6°110.4°
H2C01H3109.5°109.5°
H2C01H4109.5°109.4°
H3C01H4109.5°109.5°
H6C14H7109.5°109.5°
H8C16H9109.5°109.9°
H10C17H11109.5°110.4°
H12C19H13109.4°113.2°
H14C21H15109.5°113.2°
H16C22H17109.5°110.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C01N02C03H22180.0°180.0°
C01N02C03O04179.5°0.0°
C01N02C03C050.4°180.0°
N02C01H2H3120.0°120.0°
N02C01H2H4120.0°120.0°
N02C01H3H4120.0°120.0°
N02C03O04C05180.0°180.0°
N02C03C05C0650.3°90.0°
N02C03C05C23131.6°90.0°
C03N02C01H2180.0°180.0°
C03N02C01H360.0°60.0°
C03N02C01H460.0°60.0°
O04C03C05C06129.6°90.0°
O04C03C05C2348.4°90.1°
O04C03N02H220.5°180.0°
C03C05C06C23178.5°180.0°
C03C05C06C240.8°0.0°
C03C05C06O07178.8°179.9°
C03C05C23C132.4°0.1°
C03C05C23C08178.9°179.7°
C05C03N02H22179.6°0.0°
O28C27C29C26179.5°179.7°
O28C27C29C30179.6°180.0°
O28C27C26C25179.3°179.7°
O28C27C26H190.7°0.3°
O28C27C29H200.4°0.3°
C27C29C30H20180.0°179.7°
C29C27C26C250.2°0.1°
C27C29C30C241.4°0.5°
C29C27C26H19179.8°180.0°
C27C29C30H21178.6°180.0°
C29C27O28H25180.0°90.0°
C26C27C29C300.0°0.3°
C27C26C25H19180.0°179.9°
C27C26C25C241.9°0.1°
C27C26C25H18178.1°180.0°
C26C27C29H20180.0°180.0°
C26C27O28H250.4°89.7°
C29C30C24H21180.0°179.6°
C29C30C24C252.8°0.4°
C29C30C24C06177.9°179.8°
C26C25C24C303.1°0.2°
C26C25C24H18180.0°180.0°
C26C25C24C06178.3°180.0°
C13C14N15H6119.0°120.0°
C13C14N15H7119.0°120.0°
C14C13C23C053.0°0.1°
C13C14N15C22173.6°170.0°
C14C13C23C11177.3°180.0°
C14C13C23C08178.4°179.8°
C13C14N15C1672.5°72.3°
C14C13C11O121.7°0.0°
C14C13C11C10178.2°180.0°
C13C14H6H7122.9°120.0°
C14N15C22C16114.6°120.7°
C14N15C22C18140.4°158.2°
N15C14C13C2372.7°90.0°
N15C14C13C11104.7°90.0°
C14N15C16C17151.0°145.6°
N15C14H6H7122.9°120.0°
C14N15C16H831.7°95.0°
C14N15C16H989.6°26.1°
C14N15C22H16100.0°39.8°
C14N15C22H1720.7°83.3°
C05C06C24C30152.1°0.3°
C05C06C24C2533.2°180.0°
C05C06C24O07177.9°179.9°
C06C05C23C13179.2°179.9°
C06C05C23C080.5°0.2°
C05C06O07C080.1°0.2°
C23C05C06C24177.6°180.0°
C23C05C06O070.4°0.0°
C05C23C13C08178.6°179.8°
C05C23C13C11179.7°180.0°
C05C23C08O070.5°0.3°
C05C23C08C09179.7°179.9°
C30C24C25C06175.2°179.8°
C30C24C06O0730.0°179.8°
C30C24C25H18176.9°179.8°
C24C30C29H20178.6°179.8°
C25C24C06O07144.6°0.0°
C24C25C26H19178.1°180.0°
C25C24C30H21177.2°180.0°
C24C06O07C08178.2°179.8°
C06C24C25H181.7°0.0°
C06C24C30H212.1°0.2°
N15C22C18H16119.6°118.4°
N15C22C18H17119.6°118.4°
N15C22C18C19150.5°165.5°
N15C22C18C21113.3°94.0°
N15C22C18C179.1°35.7°
C22N15C16C1731.8°24.9°
C22N15C14H654.6°50.0°
C22N15C14H767.4°70.0°
C22N15C16H887.5°144.3°
C22N15C16H9151.2°94.5°
N15C22H16H17121.1°123.1°
C18C22N15C1625.7°37.6°
C22C18C19C21104.5°117.9°
C22C18C19C17139.5°123.9°
C22C18C19O20111.4°139.7°
C22C18C21C17117.6°123.8°
C22C18C21O20134.1°139.8°
C22C18C17C1610.2°20.6°
C22C18C17H10109.0°98.2°
C22C18C17H11129.4°139.3°
C22C18C19H125.3°25.7°
C22C18C19H13131.8°106.2°
C22C18C21H14109.2°106.2°
C22C18C21H1517.5°25.8°
C18C22H16H17121.1°123.2°
C06O07C08C230.2°0.3°
C06O07C08C09180.0°179.8°
C13C23C08O07179.5°179.8°
C13C23C08C090.7°0.3°
C23C13C11O12179.1°180.0°
C23C13C11C100.9°0.0°
C23C13C14H646.3°30.0°
C23C13C14H7168.3°150.0°
C08C23C13C111.1°0.2°
C23C08O07C09179.8°179.4°
C23C08C09C100.1°0.1°
C23C08C09H5179.9°180.0°
C13C11O12C10179.9°180.0°
C13C11C10C090.2°0.2°
C13C11C10H1179.8°180.0°
C11C13C14H6136.3°150.0°
C11C13C14H714.3°30.0°
C13C11O12H24180.0°90.0°
N15C16C17C1826.3°2.1°
N15C16C17H8119.4°119.4°
N15C16C17H9119.4°119.5°
C16N15C14H6168.6°167.7°
C16N15C14H746.5°47.7°
N15C16H8H9121.8°121.2°
N15C16C17H1092.9°120.9°
N15C16C17H11145.6°116.8°
C16N15C22H16145.4°80.8°
C16N15C22H1793.9°156.1°
O07C08C09C10179.9°179.5°
O07C08C09H50.1°0.7°
C08C09C10C110.2°0.2°
C08C09C10H5180.0°179.9°
C08C09C10H1179.8°180.0°
O12C11C10C09179.7°179.8°
O12C11C10H10.3°0.0°
C11C10C09H1180.0°179.8°
C11C10C09H5179.8°179.7°
C10C11O12H240.1°90.0°
C18C19O20H12116.8°114.0°
C18C19O20H13116.8°114.0°
C19C18C21C17115.2°118.2°
C18C19O20C217.2°23.1°
C19C18C17C16136.7°150.2°
C19C18C17H10104.1°31.5°
C19C18C17H1117.5°91.0°
C18C19H12H13128.7°132.3°
C19C18C21H14123.6°135.8°
C19C18C21H15109.8°92.1°
C19C18C22H1689.8°47.1°
C19C18C22H1730.9°76.1°
O20C19C18C17109.1°96.4°
O20C19H12H13128.7°132.4°
C19O20C21H14123.8°137.2°
C19O20C21H15109.5°90.9°
C18C21O20H14116.6°114.0°
C18C21O20H15116.7°114.0°
C21C18C17C16125.2°109.0°
C21C18C17H106.0°132.2°
C21C18C17H11115.6°9.8°
C21C18C19H12109.8°92.2°
C21C18C19H13123.8°135.9°
C18C21H14H15129.0°132.4°
C21C18C22H166.4°147.6°
C21C18C22H17127.1°24.5°
C17C18C21O20108.3°96.4°
C18C17C16H10119.2°118.8°
C18C17C16H11119.3°118.9°
C18C17C16H893.1°121.5°
C18C17C16H9145.7°117.4°
C18C17H10H11122.2°122.5°
C17C18C19H12134.1°149.6°
C17C18C19H137.7°17.7°
C17C18C21H148.4°17.6°
C17C18C21H15135.1°149.7°
C17C18C22H16128.8°82.7°
C17C18C22H17110.5°154.2°
C21O20C19H12109.6°90.8°
C21O20C19H13124.0°137.1°
O20C21H14H15129.0°132.3°
C17C16H8H9121.8°121.1°
C16C17H10H11122.2°122.3°
H1C10C09H50.2°0.1°
H2C01H3H4120.0°120.0°
H2C01N02H220.0°0.0°
H3C01N02H22120.0°120.0°
H4C01N02H22120.0°120.0°
H8C16C17H10147.7°119.7°
H8C16C17H1126.2°2.6°
H9C16C17H1026.5°1.4°
H9C16C17H1195.0°123.7°
H18C25C26H191.9°0.1°
H20C29C30H211.4°0.2°

250835

PDB entries from 2026-03-18

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