Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

Z04

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N01C11sing1.39Å1.31Å
N01C16sing1.46Å1.50Å
N01HN01sing0.97Å1.00Å
N02C15sing1.35Å1.37Å
N02HN02sing0.97Å1.00Å
N02HN0Asing0.97Å1.00Å
N03C18doub1.32Å1.36ÅAromatic
N03C19sing1.33Å1.36ÅAromatic
N04C19doub1.32Å1.37ÅAromatic
N04C20sing1.32Å1.37ÅAromatic
N05C13sing1.39Å1.32Å
N05C21sing1.47Å1.50Å
N05C23sing1.47Å1.51Å
N06C19sing1.38Å1.28Å
N06HN06sing0.97Å1.00Å
N06HN0Bsing0.97Å1.00Å
N07C14sing1.48Å1.30Å
N07O27doub1.22Å1.30Å
N07O28sing1.22Å1.33Å
C08C09doub1.40Å1.42ÅAromatic
C08C14sing1.36Å1.44ÅAromatic
C08H08sing1.08Å1.08Å
C09C11sing1.41Å1.44ÅAromatic
C09C15sing1.47Å1.40Å
C11C12doub1.39Å1.44ÅAromatic
C12C13sing1.39Å1.42ÅAromatic
C12H12sing1.08Å1.08Å
C13C14doub1.39Å1.47ÅAromatic
C15O25doub1.22Å1.21Å
C16C17sing1.51Å1.51Å
C16H16sing1.09Å1.10Å
C16H16Asing1.09Å1.10Å
C17C18sing1.39Å1.40ÅAromatic
C17C20doub1.39Å1.40ÅAromatic
C18H18sing1.08Å1.08Å
C20H20sing1.08Å1.08Å
C21C22sing1.53Å1.54Å
C21H21sing1.09Å1.10Å
C21H21Asing1.09Å1.10Å
C22O26sing1.43Å1.42Å
C22H22sing1.09Å1.10Å
C22H22Asing1.09Å1.10Å
C23C24sing1.53Å1.53Å
C23H23sing1.09Å1.10Å
C23H23Asing1.09Å1.10Å
C24O26sing1.43Å1.41Å
C24H24sing1.09Å1.10Å
C24H24Asing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C11N01C16125.0°120.0°
C11N01HN01104.6°120.0°
N01C11C09120.0°120.2°
N01C11C12121.1°120.2°
C16N01HN01104.6°120.0°
N01C16C17109.5°109.5°
N01C16H16109.5°109.5°
N01C16H16A109.5°109.5°
C15N02HN02120.0°120.0°
C15N02HN0A120.0°120.0°
N02C15C09120.4°120.0°
N02C15O25118.4°120.0°
HN02N02HN0A120.0°120.0°
C18N03C19116.2°120.7°
N03C18C17123.8°119.2°
N03C18H18118.1°120.4°
N03C19N04125.4°121.6°
N03C19N06117.2°119.2°
C19N04C20115.9°120.7°
N04C19N06117.4°119.2°
N04C20C17123.6°119.2°
N04C20H20118.2°120.4°
C13N05C21119.2°111.0°
C13N05C23120.3°111.0°
N05C13C12117.2°119.9°
N05C13C14124.8°119.8°
C21N05C23120.5°110.7°
N05C21C22112.9°109.3°
N05C21H21108.3°109.5°
N05C21H21A108.3°109.5°
N05C23C24112.8°109.3°
N05C23H23108.4°109.5°
N05C23H23A108.4°109.5°
C19N06HN06109.5°120.0°
C19N06HN0B109.5°120.0°
HN06N06HN0B109.4°120.0°
C14N07O27122.0°120.0°
C14N07O28120.5°120.0°
N07C14C08117.4°119.8°
N07C14C13124.3°119.8°
O27N07O28117.5°120.0°
C09C08C14122.8°120.1°
C09C08H08118.6°120.0°
C08C09C11119.1°119.7°
C08C09C15118.8°120.2°
C14C08H08118.6°119.9°
C08C14C13118.3°120.4°
C11C09C15122.1°120.1°
C09C11C12118.9°119.6°
C09C15O25121.1°120.0°
C11C12C13122.9°119.9°
C11C12H12118.5°120.1°
C13C12H12118.6°120.1°
C12C13C14118.1°120.3°
C17C16H16109.5°109.4°
C17C16H16A109.5°109.4°
C16C17C18122.4°120.7°
C16C17C20122.5°120.7°
H16C16H16A109.5°109.5°
C18C17C20115.1°118.5°
C17C18H18118.1°120.4°
C17C20H20118.2°120.4°
C22C21H21108.3°109.5°
C22C21H21A108.4°109.5°
C21C22O26108.0°109.2°
C21C22H22109.9°109.5°
C21C22H22A109.9°109.5°
H21C21H21A110.6°109.5°
O26C22H22110.0°109.5°
O26C22H22A110.0°109.5°
C22O26C24108.7°113.8°
H22C22H22A109.0°109.6°
C24C23H23108.4°109.5°
C24C23H23A108.4°109.5°
C23C24O26107.8°109.3°
C23C24H24110.0°109.5°
C23C24H24A110.0°109.5°
H23C23H23A110.5°109.5°
O26C24H24110.0°109.5°
O26C24H24A110.0°109.5°
H24C24H24A108.9°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C11N01C16HN01120.0°179.7°
N01C11C09C08179.5°179.9°
N01C11C09C12179.9°179.9°
N01C11C09C150.1°0.0°
N01C11C12C13179.7°180.0°
N01C11C12H120.2°0.1°
C11N01C16C1782.8°180.0°
C11N01C16H16157.2°60.0°
C11N01C16H16A37.2°60.0°
C16N01C11C09164.3°174.4°
C16N01C11C1215.9°5.7°
N01C16C17H16120.0°120.0°
N01C16C17H16A120.0°120.0°
N01C16H16H16A120.0°120.0°
N01C16C17C1853.2°90.0°
N01C16C17C20125.7°89.9°
HN01N01C11C0975.8°5.9°
HN01N01C11C12104.1°174.0°
HN01N01C16C1737.2°0.3°
HN01N01C16H1682.8°120.3°
HN01N01C16H16A157.2°119.7°
C15N02HN02HN0A180.0°180.0°
N02C15C09C0824.1°5.9°
N02C15C09C11155.4°174.2°
N02C15C09O25179.4°180.0°
HN02N02C15C09179.4°0.0°
HN02N02C15O250.0°180.0°
HN0AN02C15C090.6°179.9°
HN0AN02C15O25180.0°0.0°
C18N03C19N040.2°0.0°
C18N03C19N06179.6°180.0°
N03C18C17C16179.0°180.0°
N03C18C17H18180.0°179.9°
N03C18C17C200.1°0.0°
N03C19N04N06179.9°179.9°
N03C19N04C200.2°0.0°
N03C19N06HN060.0°0.1°
N03C19N06HN0B120.0°180.0°
C19N03C18C170.1°0.0°
C19N03C18H18179.9°179.9°
N04C19N06HN06179.9°180.0°
N04C19N06HN0B60.1°0.0°
C19N04C20C170.1°0.0°
C19N04C20H20179.9°180.0°
C20N04C19N06179.6°180.0°
N04C20C17C16179.0°180.0°
N04C20C17C180.0°0.0°
N04C20C17H20180.0°180.0°
C13N05C21C23176.5°123.8°
N05C13C14N070.8°0.1°
N05C13C14C08179.4°179.9°
N05C13C12C11179.8°180.0°
N05C13C12C14180.0°179.9°
N05C13C12H120.3°0.1°
C13N05C21C22160.9°177.6°
C13N05C21H2140.9°62.4°
C13N05C21H21A79.1°57.7°
C13N05C23C24160.4°177.6°
C13N05C23H2379.7°57.7°
C13N05C23H23A40.4°62.4°
C21N05C13C1253.6°60.0°
C21N05C13C14126.4°120.1°
N05C21C22H21120.0°120.0°
N05C21C22H21A120.0°119.9°
N05C21H21H21A118.6°120.1°
N05C21C22O2641.7°56.9°
N05C21C22H2278.3°176.8°
N05C21C22H22A161.7°63.1°
C21N05C23C2416.1°58.6°
C21N05C23H23103.8°178.6°
C21N05C23H23A136.1°61.4°
C23N05C13C12122.9°63.6°
C23N05C13C1457.1°116.3°
C23N05C21C2215.6°58.6°
C23N05C21H21135.6°61.4°
C23N05C21H21A104.4°178.5°
N05C23C24H23120.0°120.0°
N05C23C24H23A120.0°119.9°
N05C23H23H23A118.7°120.1°
N05C23C24O2642.8°56.8°
N05C23C24H24162.8°63.1°
N05C23C24H24A77.2°176.8°
C19N06HN06HN0B120.0°179.9°
C14N07O27O28177.6°180.0°
N07C14C08C09179.4°180.0°
N07C14C08C13179.8°180.0°
N07C14C08H080.6°0.3°
N07C14C13C12179.1°180.0°
O27N07C14C08162.1°0.0°
O27N07C14C1317.7°180.0°
O28N07C14C0815.4°180.0°
O28N07C14C13164.8°0.0°
C09C08C14H08180.0°179.7°
C08C09C11C15179.6°180.0°
C08C09C11C120.6°0.0°
C09C08C14C130.4°0.0°
C08C09C15O25155.2°174.1°
C14C08C09C110.2°0.0°
C14C08C09C15179.8°180.0°
C08C14C13C120.6°0.0°
H08C08C09C11179.7°179.7°
H08C08C09C150.2°0.3°
H08C08C14C13179.6°179.7°
C09C11C12C130.4°0.1°
C09C11C12H12179.7°180.0°
C11C09C15O2525.2°5.9°
C15C09C11C12179.8°179.9°
C11C12C13H12180.0°179.9°
C11C12C13C140.3°0.1°
H12C12C13C14179.7°180.0°
C17C16H16H16A120.0°119.9°
C16C17C18C20179.0°179.9°
C16C17C18H181.0°0.1°
C16C17C20H201.0°0.0°
H16C16C17C1866.8°30.1°
H16C16C17C20114.3°150.0°
H16AC16C17C18173.2°150.0°
H16AC16C17C205.7°30.1°
C18C17C20H20180.0°180.0°
C20C17C18H18180.0°180.0°
C22C21H21H21A118.6°120.1°
C21C22O26H22120.0°119.9°
C21C22O26H22A120.0°119.9°
C21C22H22H22A120.6°120.1°
C21C22O26C2474.4°58.7°
H21C21C22O26161.7°63.1°
H21C21C22H2241.7°56.8°
H21C21C22H22A78.3°177.0°
H21AC21C22O2678.3°176.8°
H21AC21C22H22161.7°63.3°
H21AC21C22H22A41.7°56.9°
O26C22H22H22A120.6°120.2°
C22O26C24C2374.9°58.7°
C22O26C24H24165.0°61.2°
C22O26C24H24A45.1°178.7°
H22C22O26C2445.6°178.6°
H22AC22O26C24165.6°61.2°
C24C23H23H23A118.6°120.1°
C23C24O26H24120.0°119.9°
C23C24O26H24A120.0°120.0°
C23C24H24H24A120.7°120.1°
H23C23C24O2677.2°176.8°
H23C23C24H2442.8°56.9°
H23C23C24H24A162.8°63.3°
H23AC23C24O26162.8°63.1°
H23AC23C24H2477.1°177.0°
H23AC23C24H24A42.8°56.8°
O26C24H24H24A120.7°120.1°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon