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YYI

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
FCsing1.40Å1.33Å
C5Ndoub1.31Å1.36Å
C5C1sing1.46Å1.34Å
OCsing1.43Å1.36Å
OC1sing1.36Å1.37Å
CF1sing1.40Å1.33Å
NC4sing1.34Å1.37Å
C1C2doub1.35Å1.43Å
C4O1doub1.21Å1.24Å
C4C3sing1.51Å1.44Å
C2C3sing1.52Å1.35Å
C5H1sing1.08Å1.08Å
C3H2sing1.09Å1.10Å
C3H3sing1.09Å1.10Å
C2H4sing1.08Å1.08Å
CH5sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
FCO111.7°109.5°
FCF197.8°109.5°
FCH5112.7°109.5°
NC5C1119.8°123.3°
C5NC4124.3°122.7°
NC5H1120.1°118.3°
C5C1O125.5°119.8°
C5C1C2119.3°120.5°
C1C5H1120.1°118.4°
COC1112.4°117.0°
OCF1108.5°109.4°
OCH5112.4°109.5°
OC1C2115.1°119.8°
F1CH5112.8°109.5°
NC4O1119.2°120.5°
NC4C3115.5°118.9°
C1C2C3120.4°117.4°
C1C2H4119.8°121.3°
O1C4C3125.2°120.5°
C4C3C2120.6°117.2°
C4C3H2106.6°107.9°
C4C3H3106.6°108.0°
C2C3H2106.6°107.9°
C2C3H3106.6°107.8°
C3C2H4119.8°121.3°
H2C3H3109.5°107.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
FCOF1106.7°120.0°
FCOH5127.8°120.0°
FCOC1164.5°60.0°
FCF1H5118.7°120.1°
NC5C1H1180.0°180.0°
NC5C1O174.0°180.0°
NC5C1C22.1°0.3°
C5NC4O1175.1°180.0°
C5NC4C32.3°0.3°
C5C1OC73.5°180.0°
C5C1OC2176.3°179.7°
C1C5NC40.1°0.0°
C5C1C2C31.9°0.3°
C5C1C2H4178.0°179.8°
OCF1H5125.2°120.0°
COC1C2102.8°0.3°
C1OCF188.8°60.0°
OC1C2C3174.6°179.9°
OC1C5H16.0°0.0°
OC1C2H45.4°0.1°
C1OCH536.7°180.0°
NC4O1C3177.1°179.7°
NC4C3C22.4°0.3°
C4NC5H1179.9°180.0°
NC4C3H2123.9°122.2°
NC4C3H3119.2°121.6°
C1C2C3C40.4°0.0°
C1C2C3H4180.0°179.9°
C2C1C5H1177.9°179.7°
C1C2C3H2121.9°121.9°
C1C2C3H3121.2°122.0°
O1C4C3C2174.8°180.0°
O1C4C3H253.2°58.1°
O1C4C3H363.7°58.1°
C4C3C2H2121.6°122.0°
C4C3C2H3121.6°122.0°
C4C3H2H3115.0°116.3°
C4C3C2H4179.6°180.0°
C2C3H2H3114.9°116.2°
H2C3C2H458.1°58.0°
H3C3C2H458.8°58.1°

223532

PDB entries from 2024-08-07

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