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YY4

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CBCOBAsing1.43Å1.44Å
OBACAEsing1.36Å1.39Å
CAECAFdoub1.39Å1.41ÅAromatic
CAECADsing1.39Å1.37ÅAromatic
CLYCADsing1.74Å1.71Å
CAFCAAsing1.39Å1.42ÅAromatic
CADCACdoub1.39Å1.40ÅAromatic
OBKCBIdoub1.22Å1.23Å
CBBOAZsing1.43Å1.43Å
CAAOAZsing1.36Å1.37Å
CAACABdoub1.39Å1.37ÅAromatic
OBQCALdoub1.22Å1.23Å
CACCABsing1.39Å1.37ÅAromatic
CACNAGsing1.40Å1.44Å
CBLCBMsing1.51Å1.52Å
CBLCBJdoub1.33Å1.53Å
CBICBJsing1.47Å1.56Å
CBINBGsing1.35Å1.33Å
CBHNBGsing1.47Å1.48Å
CBHCBDsing1.55Å1.54Å
CBMNBNsing1.47Å1.50Å
CABCLXsing1.74Å1.72Å
NAGCALsing1.35Å1.42Å
NAGCAHsing1.47Å1.46Å
NBGCBFsing1.47Å1.49Å
CALNAKsing1.34Å1.36Å
CBDNAKsing1.47Å1.48Å
CBDCBEsing1.55Å1.52Å
NAKC4sing1.38Å1.38Å
NBNCBOsing1.47Å1.48Å
NBNCBPsing1.47Å1.49Å
CBFCBEsing1.54Å1.50Å
CAHC5sing1.51Å1.40Å
C4C5doub1.40Å1.40ÅAromatic
C4N3sing1.33Å1.35ÅAromatic
C5C6sing1.37Å1.38ÅAromatic
N3C2doub1.33Å1.35ÅAromatic
C6N1doub1.33Å1.36ÅAromatic
C2N1sing1.33Å1.35ÅAromatic
C2NAQsing1.39Å1.45Å
CASCATdoub1.38Å1.40ÅAromatic
CASCARsing1.39Å1.38ÅAromatic
CATCAUsing1.38Å1.39ÅAromatic
NAQCARsing1.40Å1.43Å
CARCAWdoub1.39Å1.41ÅAromatic
CAUCAVdoub1.38Å1.39ÅAromatic
CAWCAVsing1.38Å1.39ÅAromatic
CBBH1sing1.09Å1.10Å
CBBH2sing1.09Å1.10Å
CBBH3sing1.09Å1.10Å
CAFH4sing1.08Å1.08Å
CBCH5sing1.09Å1.10Å
CBCH6sing1.09Å1.10Å
CBCH7sing1.09Å1.10Å
CAHH8sing1.09Å1.10Å
CAHH9sing1.09Å1.10Å
C6H10sing1.08Å1.08Å
NAQH11sing0.97Å1.00Å
CASH12sing1.08Å1.08Å
CATH13sing1.08Å1.08Å
CAUH14sing1.08Å1.08Å
CAVH15sing1.08Å1.08Å
CAWH16sing1.08Å1.08Å
CBDH17sing1.09Å1.10Å
CBHH18sing1.09Å1.10Å
CBHH19sing1.09Å1.10Å
CBEH20sing1.09Å1.10Å
CBEH21sing1.09Å1.10Å
CBFH22sing1.09Å1.10Å
CBFH23sing1.09Å1.10Å
CBJH24sing1.08Å1.08Å
CBLH25sing1.08Å1.08Å
CBMH26sing1.09Å1.10Å
CBMH27sing1.09Å1.10Å
CBPH29sing1.09Å1.10Å
CBPH30sing1.09Å1.10Å
CBPH31sing1.09Å1.10Å
CBOH32sing1.09Å1.10Å
CBOH33sing1.09Å1.10Å
CBOH34sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CBCOBACAE114.0°117.0°
OBACBCH5109.5°109.5°
OBACBCH6109.5°109.4°
OBACBCH7109.5°109.5°
OBACAECAF127.6°120.0°
OBACAECAD113.9°120.0°
CAFCAECAD118.4°120.0°
CAECAFCAA119.4°120.1°
CAECAFH4120.3°120.0°
CAECADCLY120.0°120.0°
CAECADCAC121.5°120.0°
CLYCADCAC118.5°120.0°
CAFCAAOAZ126.4°120.0°
CAFCAACAB120.6°120.0°
CAACAFH4120.3°119.9°
CADCACCAB120.6°120.0°
CADCACNAG111.8°120.0°
OBKCBICBJ123.4°120.0°
OBKCBINBG121.1°120.0°
CBBOAZCAA115.8°117.0°
OAZCBBH1109.5°109.4°
OAZCBBH2109.5°109.5°
OAZCBBH3109.5°109.5°
OAZCAACAB113.0°120.0°
CAACABCAC119.5°120.0°
CAACABCLX118.4°120.0°
OBQCALNAG117.5°118.4°
OBQCALNAK121.0°118.4°
CABCACNAG127.4°120.0°
CACCABCLX122.1°120.0°
CACNAGCAL121.4°120.4°
CACNAGCAH111.4°120.5°
CBMCBLCBJ121.5°120.0°
CBLCBMNBN103.9°109.5°
CBMCBLH25119.2°120.0°
CBLCBMH26110.8°109.5°
CBLCBMH27110.9°109.5°
CBLCBJCBI121.2°120.0°
CBLCBJH24119.4°120.0°
CBJCBLH25119.2°120.0°
CBJCBINBG115.5°120.0°
CBICBJH24119.4°120.0°
CBINBGCBH124.6°125.7°
CBINBGCBF122.8°125.6°
NBGCBHCBD99.6°104.8°
CBHNBGCBF112.5°108.7°
NBGCBHH18111.9°110.4°
NBGCBHH19111.9°110.4°
CBHCBDNAK117.0°111.0°
CBHCBDCBE106.4°101.6°
CBHCBDH17108.9°111.1°
CBDCBHH18111.9°110.3°
CBDCBHH19111.9°110.4°
CBMNBNCBO111.8°111.0°
CBMNBNCBP113.6°111.0°
NBNCBMH26110.8°109.5°
NBNCBMH27110.8°109.5°
CALNAGCAH120.5°119.1°
NAGCALNAK121.5°123.2°
NAGCAHC5111.5°116.6°
NAGCAHH8109.0°108.0°
NAGCAHH9108.9°108.0°
NBGCBFCBE104.7°107.3°
NBGCBFH22110.6°109.9°
NBGCBFH23110.7°110.1°
CALNAKCBD113.4°118.5°
CALNAKC4117.2°123.0°
NAKCBDCBE105.3°111.0°
CBDNAKC4120.2°118.5°
NAKCBDH17109.7°110.8°
CBDCBECBF102.5°102.9°
CBECBDH17109.2°111.0°
CBDCBEH20111.2°110.7°
CBDCBEH21111.2°110.7°
NAKC4C5121.3°119.9°
NAKC4N3121.3°121.5°
CBONBNCBP111.6°111.0°
NBNCBOH32109.5°109.5°
NBNCBOH33109.5°109.4°
NBNCBOH34109.5°109.5°
NBNCBPH29109.5°109.5°
NBNCBPH30109.4°109.4°
NBNCBPH31109.4°109.5°
CBFCBEH20111.2°110.7°
CBFCBEH21111.2°110.9°
CBECBFH22110.7°109.8°
CBECBFH23110.7°109.8°
CAHC5C4123.7°118.2°
CAHC5C6115.9°122.2°
C5CAHH8109.0°108.0°
C5CAHH9109.0°108.0°
C5C4N3117.2°118.6°
C4C5C6120.2°119.6°
C4N3C2122.1°120.3°
C5C6N1120.0°118.6°
C5C6H10120.0°120.7°
N3C2N1121.2°122.1°
N3C2NAQ123.3°119.0°
C6N1C2119.1°120.8°
N1C6H10120.0°120.7°
N1C2NAQ115.5°118.9°
C2NAQCAR128.9°120.0°
C2NAQH11115.5°119.9°
CATCASCAR118.8°120.0°
CASCATCAU121.4°120.0°
CATCASH12120.6°120.0°
CASCATH13119.3°120.0°
CASCARNAQ123.1°120.1°
CASCARCAW119.8°119.8°
CARCASH12120.6°120.0°
CATCAUCAV119.7°120.2°
CAUCATH13119.3°119.9°
CATCAUH14120.2°119.9°
NAQCARCAW117.1°120.1°
CARNAQH11115.5°120.0°
CARCAWCAV121.3°119.9°
CARCAWH16119.3°120.0°
CAUCAVCAW119.0°120.1°
CAVCAUH14120.2°119.9°
CAUCAVH15120.5°120.0°
CAWCAVH15120.5°120.0°
CAVCAWH16119.4°120.1°
H1CBBH2109.5°109.5°
H1CBBH3109.4°109.4°
H2CBBH3109.5°109.5°
H5CBCH6109.5°109.5°
H5CBCH7109.4°109.5°
H6CBCH7109.4°109.4°
H8CAHH9109.5°107.9°
H18CBHH19109.5°110.4°
H20CBEH21109.4°110.6°
H22CBFH23109.5°109.9°
H26CBMH27109.5°109.4°
H29CBPH30109.4°109.5°
H29CBPH31109.5°109.4°
H30CBPH31109.5°109.5°
H32CBOH33109.5°109.5°
H32CBOH34109.5°109.4°
H33CBOH34109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CBCOBACAECAF4.6°0.0°
CBCOBACAECAD174.1°179.9°
OBACBCH5H6120.0°119.9°
OBACBCH5H7120.0°120.1°
OBACBCH6H7120.0°120.0°
OBACAECAFCAD178.7°179.9°
OBACAECADCLY1.6°0.0°
OBACAECAFCAA178.8°180.0°
OBACAECADCAC179.4°179.8°
OBACAECAFH41.2°0.1°
CAEOBACBCH5180.0°180.0°
CAEOBACBCH660.0°60.0°
CAEOBACBCH760.0°59.9°
CAFCAECADCLY179.6°180.0°
CAECAFCAAH4180.0°179.9°
CAFCAECADCAC0.5°0.3°
CAECAFCAAOAZ178.2°179.9°
CAECAFCAACAB0.5°0.2°
CAECADCLYCAC179.1°179.8°
CADCAECAFCAA0.0°0.1°
CAECADCACCAB1.5°0.2°
CAECADCACNAG177.2°180.0°
CADCAECAFH4179.9°180.0°
CLYCADCACCAB179.4°180.0°
CLYCADCACNAG3.7°0.2°
CAFCAAOAZCBB4.4°0.3°
CAFCAAOAZCAB178.8°179.7°
CAFCAACABCAC1.5°0.3°
CAFCAACABCLX178.8°179.8°
CADCACCABCAA2.0°0.1°
CADCACCABNAG175.0°179.9°
CADCACCABCLX178.3°179.9°
CADCACNAGCAL109.9°90.0°
CADCACNAGCAH98.7°90.2°
OBKCBICBJCBL0.6°0.1°
OBKCBICBJNBG178.5°179.9°
OBKCBINBGCBH2.5°0.1°
OBKCBINBGCBF178.8°179.9°
OBKCBICBJH24179.4°180.0°
CBBOAZCAACAB174.4°180.0°
OAZCBBH1H2120.0°120.0°
OAZCBBH1H3120.0°120.0°
OAZCBBH2H3120.0°120.0°
OAZCAACABCAC177.4°180.0°
OAZCAACABCLX2.3°0.0°
CAAOAZCBBH1180.0°180.0°
CAAOAZCBBH260.0°60.0°
CAAOAZCBBH360.0°60.1°
OAZCAACAFH41.9°0.0°
CAACABCACCLX179.7°180.0°
CAACABCACNAG177.0°179.8°
CABCAACAFH4179.5°179.7°
OBQCALNAGCAC16.6°0.1°
OBQCALNAGNAK177.4°179.9°
OBQCALNAGCAH165.5°179.7°
OBQCALNAKCBD28.7°0.1°
OBQCALNAKC4175.7°179.9°
CABCACNAGCAL74.8°89.9°
CABCACNAGCAH76.7°89.9°
NAGCACCABCLX3.3°0.2°
CACNAGCALCAH148.9°179.8°
CACNAGCALNAK166.1°180.0°
CACNAGCAHC5174.2°180.0°
CACNAGCAHH853.9°58.2°
CACNAGCAHH965.5°58.2°
CBMCBLCBJH25180.0°180.0°
CBMCBLCBJCBI178.5°180.0°
CBLCBMNBNH26119.1°120.0°
CBLCBMNBNH27119.1°120.0°
CBLCBMNBNCBO163.4°170.0°
CBLCBMNBNCBP69.2°66.1°
CBMCBLCBJH241.5°0.0°
CBLCBMH26H27122.6°120.0°
CBLCBJCBIH24180.0°179.9°
CBLCBJCBINBG179.1°180.0°
CBJCBLCBMNBN106.2°125.0°
CBJCBLCBMH26134.7°115.0°
CBJCBLCBMH2712.9°5.0°
CBJCBINBGCBH178.9°180.0°
CBJCBINBGCBF2.7°0.0°
CBICBJCBLH251.5°0.1°
CBINBGCBHCBF176.6°180.0°
CBINBGCBHCBD166.7°155.9°
CBINBGCBFCBE170.6°179.0°
CBINBGCBHH1848.3°85.3°
CBINBGCBHH1974.9°37.0°
CBINBGCBFH2251.3°59.6°
CBINBGCBFH2370.2°61.5°
NBGCBICBJH240.9°0.1°
NBGCBHCBDH18118.4°118.9°
NBGCBHCBDH19118.4°118.8°
NBGCBHCBDNAK151.0°155.1°
NBGCBHCBDCBE33.6°37.0°
CBHNBGCBFCBE6.1°1.1°
NBGCBHCBDH1784.0°81.1°
NBGCBHH18H19124.6°122.3°
CBHNBGCBFH22125.3°120.5°
CBHNBGCBFH23113.2°118.4°
CBDCBHNBGCBF16.7°24.1°
CBHCBDNAKCAL111.5°52.2°
CBHCBDNAKCBE118.0°112.2°
CBHCBDNAKH17124.6°124.0°
CBHCBDCBEH17117.4°118.1°
CBHCBDNAKC434.4°127.8°
CBHCBDCBECBF38.5°35.5°
CBDCBHH18H19124.6°122.3°
CBHCBDCBEH20157.3°153.9°
CBHCBDCBEH2180.4°83.1°
CBMNBNCBOCBP128.5°123.9°
NBNCBMCBLH2573.8°55.0°
NBNCBMH26H27122.6°120.0°
CBMNBNCBPH29180.0°60.0°
CBMNBNCBPH3060.0°180.0°
CBMNBNCBPH3160.0°60.0°
CBMNBNCBOH32180.0°60.0°
CBMNBNCBOH3360.0°180.0°
CBMNBNCBOH3460.0°60.0°
NAGCALNAKCBD148.5°180.0°
NAGCALNAKC41.6°0.0°
CALNAGCAHC522.4°0.2°
CALNAGCAHH897.9°121.6°
CALNAGCAHH9142.7°122.0°
CAHNAGCALNAK17.1°0.2°
NAGCAHC5H8120.3°121.8°
NAGCAHC5H9120.3°121.8°
NAGCAHC5C411.3°0.0°
NAGCAHC5C6164.0°180.0°
NAGCAHH8H9119.0°116.6°
NBGCBFCBECBD26.7°22.2°
NBGCBFCBEH22119.2°119.4°
NBGCBFCBEH23119.3°119.6°
CBFNBGCBHH18135.1°94.7°
CBFNBGCBHH19101.7°143.0°
NBGCBFCBEH20145.6°140.5°
NBGCBFCBEH2192.2°96.3°
NBGCBFH22H23122.2°121.2°
CALNAKCBDC4145.9°180.0°
CALNAKCBDCBE130.6°60.0°
CALNAKC4C513.2°0.3°
CALNAKC4N3173.0°180.0°
CALNAKCBDH1713.1°176.1°
NAKCBDCBEH17117.7°123.7°
NAKCBDCBECBF163.4°153.6°
CBDNAKC4C5157.8°179.7°
CBDNAKC4N328.4°0.0°
NAKCBDCBHH1890.7°36.2°
NAKCBDCBHH1932.6°86.1°
NAKCBDCBEH2077.8°88.0°
NAKCBDCBEH2144.5°35.0°
CBECBDNAKC483.5°120.0°
CBDCBECBFH20118.9°118.3°
CBDCBECBFH21118.9°118.4°
CBECBDCBHH18152.0°81.9°
CBECBDCBHH1984.8°155.8°
CBDCBEH20H21123.3°123.1°
CBDCBECBFH22145.9°97.3°
CBDCBECBFH2392.6°141.8°
NAKC4C5CAH6.2°0.2°
NAKC4C5N3174.1°179.8°
NAKC4C5C6178.7°179.8°
NAKC4N3C2178.2°179.8°
C4NAKCBDH17159.0°3.9°
CBONBNCBMH2644.3°70.0°
CBONBNCBMH2777.5°50.0°
CBONBNCBPH2952.4°64.0°
CBONBNCBPH3067.5°56.1°
CBONBNCBPH31172.4°176.1°
NBNCBOH32H33120.0°120.0°
NBNCBOH32H34120.0°120.0°
NBNCBOH33H34120.0°120.0°
CBPNBNCBMH26171.7°54.0°
CBPNBNCBMH2749.9°173.9°
NBNCBPH29H30120.0°120.0°
NBNCBPH29H31120.0°120.0°
NBNCBPH30H31120.0°120.0°
CBPNBNCBOH3251.5°176.1°
CBPNBNCBOH33171.6°56.1°
CBPNBNCBOH3468.5°63.9°
CBFCBECBDH1778.9°82.7°
CBFCBEH20H21123.2°123.4°
CBECBFH22H23122.2°120.9°
CAHC5C4C6175.1°180.0°
CAHC5C4N3179.8°180.0°
CAHC5C6N1179.6°180.0°
C5CAHH8H9119.1°116.5°
CAHC5C6H100.4°0.0°
C5C4N3C24.1°0.0°
C4C5C6N14.1°0.0°
C4C5CAHH8108.9°121.8°
C4C5CAHH9131.6°121.8°
C4C5C6H10175.9°179.9°
N3C4C5C64.6°0.0°
C4N3C2N13.0°0.0°
C4N3C2NAQ178.2°180.0°
C5C6N1H10180.0°180.0°
C5C6N1C22.8°0.0°
C6C5CAHH875.7°58.2°
C6C5CAHH943.7°58.2°
N3C2N1C62.2°0.0°
N3C2N1NAQ178.8°180.0°
N3C2NAQCAR1.7°174.4°
N3C2NAQH11178.3°5.7°
C6N1C2NAQ178.9°180.0°
N1C2NAQCAR177.2°5.5°
C2N1C6H10177.2°180.0°
N1C2NAQH112.9°174.4°
C2NAQCARCAS9.2°33.7°
C2NAQCARH11180.0°179.9°
C2NAQCARCAW172.9°146.6°
CATCASCARH12180.0°180.0°
CASCATCAUH13180.0°180.0°
CATCASCARNAQ179.3°180.0°
CATCASCARCAW1.5°0.3°
CASCATCAUCAV2.2°0.1°
CASCATCAUH14177.8°180.0°
CARCASCATCAU2.7°0.0°
CASCARNAQCAW177.9°179.7°
CASCARCAWCAV0.3°0.6°
CASCARNAQH11170.7°146.4°
CARCASCATH13177.3°180.0°
CASCARCAWH16179.7°179.7°
CATCAUCAVH14180.0°180.0°
CATCAUCAVCAW0.3°0.2°
CAUCATCASH12177.3°179.9°
CATCAUCAVH15179.7°180.0°
NAQCARCAWCAV177.6°179.7°
NAQCARCASH120.7°0.1°
NAQCARCAWH162.4°0.0°
CARCAWCAVCAU0.9°0.6°
CARCAWCAVH16180.0°179.7°
CAWCARNAQH117.1°33.3°
CAWCARCASH12178.5°179.7°
CARCAWCAVH15179.0°179.7°
CAUCAVCAWH15180.0°179.7°
CAVCAUCATH13177.9°180.0°
CAUCAVCAWH16179.1°179.7°
CAWCAVCAUH14179.7°179.7°
H1CBBH2H3120.0°120.0°
H5CBCH6H7120.0°120.0°
H12CASCATH132.7°0.0°
H13CATCAUH142.1°0.0°
H14CAUCAVH150.3°0.0°
H15CAVCAWH161.0°0.0°
H17CBDCBHH1834.3°160.0°
H17CBDCBHH19157.6°37.8°
H17CBDCBEH2039.9°35.7°
H17CBDCBEH21162.2°158.8°
H20CBECBFH2295.2°21.1°
H20CBECBFH2326.3°99.9°
H21CBECBFH2227.0°144.3°
H21CBECBFH23148.5°23.4°
H24CBJCBLH25178.5°180.0°
H25CBLCBMH2645.3°65.0°
H25CBLCBMH27167.1°175.0°
H29CBPH30H31120.0°120.0°
H32CBOH33H34120.0°120.0°

224931

PDB entries from 2024-09-11

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